prot_H-paniculata_contig158.3369.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig158.3369.1
Unique Nameprot_H-paniculata_contig158.3369.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length572
Homology
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BLAST of mRNA_H-paniculata_contig158.3369.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.870e-12
Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 0 
Query:   40 NPLVDHADVLRYIMSFSSNDGYLFVAGVSRYWKLTWG-DRPKETALELALQSPSCLAWSRDCSSPWGAKICCVAAKLGNLEIL 121
            NPL D   +LR+++SF++ +G+LFVAGVSR W+  WG +RP ET ++ A+QSPS L W+R     WG  +C  AA  G+L  L
Sbjct:  726 NPLADPT-ILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARASGLGWGPSVCARAASGGHLATL 807
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig158.3369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE4.870e-1248.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 376..533
e-value: 1.5E-6
score: 29.0
coord: 80..375
e-value: 3.0E-19
score: 70.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 192..503
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 243..433
coord: 355..533
coord: 93..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..549
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 571..571
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 550..570
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 108..164
NoneNo IPR availableTMHMMTMhelixcoord: 548..570

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig158contigH-paniculata_contig158:43874..45589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig158.3369.1mRNA_H-paniculata_contig158.3369.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig158 43873..45990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig158.3369.1 ID=prot_H-paniculata_contig158.3369.1|Name=mRNA_H-paniculata_contig158.3369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=572bp
MRHPVTVHEVHHPIVHGEAPNVYEEADVDTGEVSRRSERNPLVDHADVLR
YIMSFSSNDGYLFVAGVSRYWKLTWGDRPKETALELALQSPSCLAWSRDC
SSPWGAKICCVAAKLGNLEILKWARAAGCDWNADTCRWAARHGNLVVLQW
CRANGCPWDEQACTDAARGGHLKAVRWCRDKGYPWSTLSCALAAGEGHLA
VLQWCRANGCPWDQSTCAHAAGGGHLEVLQWCRANGCPWDADTCARAAGG
GQVVVLRWCWENGCPWDECTCEGAAGGGHLEVLQWCRAHDCPWDDRTCES
AATAGHIEVLQWCRANDCPWDHLTCACAAASGHLQILKWCRTNGCYWDEW
TCVRAAENGHLDVLKWCRANGCPWFQGACSIPAGKGLLEVVQWCRVNGCP
WDERTCESAAGGGHLDVLKWCRANGCPWDEETCARAAGGGHLNVLKWCRA
NGCPSDEETCAHAAGGGHLDVLKWCRANGCPWHEKTCARAAGGGHLDVLK
WCRANGCPQDEKTRAVGRNLWQVVQRCRSNRFSFESFPGFEDEVLLDVSV
LLFVPCLVLLCITISLVVFVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf