prot_H-paniculata_contig15799.3366.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15799.3366.1
Unique Nameprot_H-paniculata_contig15799.3366.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: D7FR30_ECTSI (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR30_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 8.060e-43
Identity = 72/88 (81.82%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 LPHVYFPCQIESTVIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNRG 88
            +P  + P    S VIFPQHV+RGRQEKT+TLL GFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNR+VPEEEAKAKKTA+GR FNRG
Sbjct:   94 MPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAKGRTFNRG 181          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A6H5L1H1_9PHAE (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H1_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.350e-40
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 LPHVYFPCQIESTVIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNRG 88
            +P  + P    S VIFPQHV+RGRQEKT+TLL GFRNYLHYHLKATKTYMHMRMRKRVVGLLQVL+R+VPEEEAKAKKTA+GR FNRG
Sbjct:  220 MPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLSRAVPEEEAKAKKTAKGRTFNRG 307          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A835ZH76_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH76_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.440e-34
Identity = 62/81 (76.54%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    7 PCQIESTVIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNR 87
            P    S +IFPQHV  GR E  VTLL GFRNYLHYH+KATKTYMHMRMRKRVVGLLQVLNR+VPE E KAKKTAQG+ F R
Sbjct:   99 PVGFLSFIIFPQHVQEGRLESCVTLLTGFRNYLHYHIKATKTYMHMRMRKRVVGLLQVLNRAVPEAEEKAKKTAQGKTFVR 179          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A7S2AY13_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY13_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.060e-19
Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    8 CQIESTVIFPQHVN-RGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEA-KAKKTAQGRAFNR 87
            C   + V+FP H++   + +K+V LL GFRNYLHYH+KA+KTY+HMRMRK+V   LQVLNR+V E++  + KKT+ G+ F R
Sbjct:  144 CGFLTFVVFPAHISSEAKFDKSVALLSGFRNYLHYHIKASKTYLHMRMRKKVQTWLQVLNRAVHEQDTPQEKKTSSGKTFKR 225          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A7S2RYF9_9STRA (Arp2/3 complex 34 kDa subunit n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYF9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.360e-19
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    8 CQIESTVIFPQHVNRGRQ-EKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNR 87
            C   S V+FP HV+   + +K+  +L  FRNYLHYH+KA+KTY+HMRMR++V G +QVLNR+V E+E +AK TA G+ F R
Sbjct:  244 CGFISFVVFPSHVSSDAKFDKSAAMLANFRNYLHYHIKASKTYLHMRMRRKVQGWMQVLNRAVHEQEKEAK-TASGKTFKR 323          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A7S2BIV5_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BIV5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.420e-18
Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    8 CQIESTVIFPQHVNRG-RQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNR 87
            C   S VIF  H+N   R  KTVTLL   RNYL YH+KA+KTY+HMRMR++V G LQVLNR+V E+  K  KT  G+ F R
Sbjct:  255 CGFLSIVIFKAHINSDERFNKTVTLLSSLRNYLMYHIKASKTYLHMRMRRKVAGWLQVLNRAVHEQGKKEVKTKSGKTFKR 335          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: F0W4D1_9STRA (Peptidase putative n=8 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4D1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.010e-18
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 0
Query:   12 STVIFPQHVNRGRQ-EKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEE-AK-AKKTAQGRAFNR 87
            S  IFP+HVN   + EK  T+L GFRNYLHYH+K +KTY+H+RMRKRV  LLQVLNRS PE + AK  KKT  GR F R
Sbjct: 1502 SFAIFPEHVNTIEKCEKAATMLQGFRNYLHYHIKCSKTYLHIRMRKRVDLLLQVLNRSRPERDPAKITKKTITGRTFQR 1580          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A812XCT5_SYMMI (Arp2/3 complex 34 kDa subunit n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XCT5_SYMMI)

HSP 1 Score: 85.1 bits (209), Expect = 2.290e-18
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = 0
Query:   18 QHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNR 87
            +HV   +    VT+L GFRNYLHYH+K +KTY+HMRMRKRV G LQ+LNR+VPE E + KK A G+ F R
Sbjct:  160 RHVVGTQLNTAVTMLTGFRNYLHYHIKCSKTYLHMRMRKRVAGWLQILNRAVPEVETE-KKGASGKTFTR 228          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: UPI000CE2392F (actin-related protein 2/3 complex subunit 2-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE2392F)

HSP 1 Score: 83.6 bits (205), Expect = 5.310e-18
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   14 VIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAF 85
            V+FP+H+ R R+E+ ++ +  FR+Y HYH+KA+K Y+H RMR+R    LQVL R+ PE E K +KTA GR F
Sbjct:  130 VLFPEHLTRQRREQAISHIQTFRDYFHYHIKASKAYIHSRMRRRTADFLQVLRRARPETEEKERKTASGRTF 201          
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Match: A0A482RR48_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RR48_9ARCH)

HSP 1 Score: 83.2 bits (204), Expect = 1.230e-17
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   12 STVIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNR 87
            S  +  +HV    +EK VTLL GFR YLHYH+K +KTY+HMRMR++V   LQVLNR++P+ E + KKTA G+ F R
Sbjct:  153 SFAVEDRHVQGAGKEKVVTLLTGFRAYLHYHIKCSKTYLHMRMRRKVASWLQVLNRAMPDIEGE-KKTAGGKTFVR 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15799.3366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR30_ECTSI8.060e-4381.82Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
A0A6H5L1H1_9PHAE1.350e-4080.68Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
A0A835ZH76_9STRA2.440e-3476.54Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema mi... [more]
A0A7S2AY13_9STRA1.060e-1953.66Arp2/3 complex 34 kDa subunit n=1 Tax=Florenciella... [more]
A0A7S2RYF9_9STRA3.360e-1954.32Arp2/3 complex 34 kDa subunit n=2 Tax=Rhizochromul... [more]
A0A7S2BIV5_9STRA1.420e-1856.79Arp2/3 complex 34 kDa subunit n=1 Tax=Dictyocha sp... [more]
F0W4D1_9STRA2.010e-1863.29Peptidase putative n=8 Tax=Albugo laibachii Nc14 T... [more]
A0A812XCT5_SYMMI2.290e-1860.00Arp2/3 complex 34 kDa subunit n=1 Tax=Symbiodinium... [more]
UPI000CE2392F5.310e-1851.39actin-related protein 2/3 complex subunit 2-like n... [more]
A0A482RR48_9ARCH1.230e-1755.26Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 6..88
e-value: 4.6E-30
score: 106.3
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 14..71
IPR007188Actin-related protein 2/3 complex subunit 2PFAMPF04045P34-Arccoord: 13..71
e-value: 1.3E-22
score: 80.6
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 13..87
NoneNo IPR availablePANTHERPTHR12058:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2coord: 13..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15799contigH-paniculata_contig15799:4088..6007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15799.3366.1mRNA_H-paniculata_contig15799.3366.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15799 4088..6007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15799.3366.1 ID=prot_H-paniculata_contig15799.3366.1|Name=mRNA_H-paniculata_contig15799.3366.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
LPHVYFPCQIESTVIFPQHVNRGRQEKTVTLLIGFRNYLHYHLKATKTYM
HMRMRKRVVGLLQVLNRSVPEEEAKAKKTAQGRAFNRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034666ARPC2/4
IPR007188ARPC2