prot_H-paniculata_contig15798.3365.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15798.3365.1
Unique Nameprot_H-paniculata_contig15798.3365.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: D8LCP7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP7_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 7.160e-36
Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    2 AGKFKKKALSVVDSVSVLSSS-NSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            A + K+KALSVVD+V  LSSS +SSNSCTITVKSSPPRTAAEMTKLSVRRGWM K+N+Q AWQRRYCCLVPHTFLYYFESKD+E  R
Sbjct:   58 ADRLKQKALSVVDTVQTLSSSTDSSNSCTITVKSSPPRTAAEMTKLSVRRGWMFKKNKQGAWQRRYCCLVPHTFLYYFESKDAEVPR 144          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A6H5JHM0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.840e-35
Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    2 AGKFKKKALSVVDSVSVLSS-SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            A + K+KALSVVD+V  LSS ++SSNSCTITVKSSPPRTAAEMTKLSVRRGWM K+N+Q AWQRRYCCLVPHTFLYYFESKD+E  R
Sbjct:   63 ADRLKQKALSVVDTVQTLSSGTDSSNSCTITVKSSPPRTAAEMTKLSVRRGWMFKKNKQGAWQRRYCCLVPHTFLYYFESKDAEVPR 149          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: F0YMI3_AURAN (PH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMI3_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 2.960e-18
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0
Query:   23 NSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            NSSN+ T+T+KSSPP+TAA  T+L VR G + KRNEQ+ WQRRYC LVP T LYY++ + SE+ R
Sbjct:   11 NSSNNTTLTIKSSPPKTAAVATRLGVRTGVLTKRNEQQVWQRRYCALVPQTLLYYYDGEHSESAR 75          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A7S4IVE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVE8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.030e-17
Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESK 81
            SN + +CTI  KS+PPRT   MT LSV+ GW++KRNEQ  WQRR+CC+VPHTFLYYFE++
Sbjct:   37 SNLNTTCTI--KSAPPRTPEVMTMLSVKSGWLVKRNEQHVWQRRWCCVVPHTFLYYFEAE 94          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A835Z0T3_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.230e-17
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            SN S+S T+ VKSSP R A    +L VR GW+LKRNEQR WQ R+C +VPHT+LYYFES++S A R
Sbjct:   22 SNDSHSSTLVVKSSPLRDAQTTKRLGVRSGWLLKRNEQRVWQPRFCVMVPHTYLYYFESENSAAPR 87          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A1E7FMA5_9STRA (PH domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMA5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.790e-17
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            SN + +CTI  KS+PPRT   +  LSV+ GW+ KRNEQ  WQ RYCC+VPHTFLYYF+S  +  C+
Sbjct:   35 SNLNTTCTI--KSAPPRTPDVLGMLSVKSGWLFKRNEQHVWQARYCCVVPHTFLYYFDSHPTNPCQ 98          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A7S2M8C0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8C0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 9.500e-17
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFES 80
            SN + +CTI  KS+PPRT   M+ LS + GW++KRNEQ  WQ+R+CC+VPHTFLYYFE+
Sbjct:   37 SNLNTTCTI--KSAPPRTPEVMSMLSSKCGWLVKRNEQHVWQKRWCCVVPHTFLYYFEA 93          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A7S2K1M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1M2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.880e-16
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESK 81
            SN + +CTI  KS+PPRT   MTKL+ + GW+ KRNEQ  WQ+R+CC+VPHTFLYYF+S+
Sbjct:   58 SNLNTTCTI--KSAPPRTPECMTKLASKSGWLYKRNEQNKWQKRWCCVVPHTFLYYFDSE 115          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A7S2K3B6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3B6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.100e-16
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESK 81
            SN + +CTI  KS+PPRT   MTKL+ + GW+ KRNEQ  WQ+R+CC+VPHTFLYYF+S+
Sbjct:   58 SNLNTTCTI--KSAPPRTPECMTKLASKSGWLYKRNEQNKWQKRWCCVVPHTFLYYFDSE 115          
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Match: A0A448ZEE1_9STRA (PH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEE1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 9.770e-16
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   22 SNSSNSCTITVKSSPPRTAAEMTKLSVRRGWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR 87
            SN + +CTI  KS+PPRT A +  L+ + GW+ KRNEQ  WQ RYCC+VPHTFLYYF+   +  C+
Sbjct:   35 SNLNTTCTI--KSAPPRTPAVLGMLANKSGWLFKRNEQHIWQARYCCVVPHTFLYYFDQHPTNPCQ 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15798.3365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LCP7_ECTSI7.160e-3681.61PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JHM0_9PHAE1.840e-3580.46PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
F0YMI3_AURAN2.960e-1861.54PH domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7S4IVE8_9STRA1.030e-1765.00Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A835Z0T3_9STRA1.230e-1762.12PH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A1E7FMA5_9STRA5.790e-1757.58PH domain-containing protein n=1 Tax=Fragilariopsi... [more]
A0A7S2M8C0_9STRA9.500e-1761.02Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2K1M2_9STRA4.880e-1661.67Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2K3B6_9STRA5.100e-1661.67Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448ZEE1_9STRA9.770e-1654.55PH domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 48..84
e-value: 1.5E-5
score: 25.4
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 46..87
score: 8.83
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 37..87
e-value: 1.0E-7
score: 33.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..87
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 17..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15798contigH-paniculata_contig15798:1350..1978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15798.3365.1mRNA_H-paniculata_contig15798.3365.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15798 144..2008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15798.3365.1 ID=prot_H-paniculata_contig15798.3365.1|Name=mRNA_H-paniculata_contig15798.3365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MAGKFKKKALSVVDSVSVLSSSNSSNSCTITVKSSPPRTAAEMTKLSVRR
GWMLKRNEQRAWQRRYCCLVPHTFLYYFESKDSEACR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf