mRNA_H-paniculata_contig15797.3364.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: D7FNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR0_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.520e-88 Identity = 204/348 (58.62%), Postives = 235/348 (67.53%), Query Frame = 1
Query: 1 MLRRGWVTREEYAQILLGDRRLYNLQEDAQPQ--------LRSRRVGIVRKLSKRSPPSLVKGFRAKSKARKRAAMVEVAHMARSPPIYTIRIRTRSTIGAARIPKMPEKKK-------TERPMDPCRDPITLDDLGSWTWDFRAAEAATPPVSCGGTGTGSKNGGGSAWRGGXXXAREMGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKTPVSSNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELKE 999
ML RGWVTREEY Q+L GDR LY+L E + LR++ +G+ RKL +++ +V+ RA+ KA K ERP D CRDPITLDDLGSWTWDFRA+EAATPPVSCG T + +K+GGG W+G + G XXXXXXXXXXXXXXXXXXXXXXXXXXX S+AVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAA+AGAKVKGSLV SY EGQ KY E+RERREMLVGADRCLGD+VSEML+TIE++ + HE+AH+YL TLFPQF+HIFSE+KE
Sbjct: 1 MLERGWVTREEYQQLLHGDR-LYSLHESEMEEXXXXXXXXLRNK-IGLRRKLWRQTQIGVVRRARARKKAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKS-TKHGGGGGWKG-----KRFG--------VGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAAKAGAKVKGSLVQSYHEGQEKYVERRERREMLVGADRCLGDIVSEMLATIEDNDESHEDAHIYLCTLFPQFSHIFSEMKE 332
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A6H5LA95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA95_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.010e-27 Identity = 123/276 (44.57%), Postives = 152/276 (55.07%), Query Frame = 1
Query: 1 MLRRGWVTREEYAQILLGDRRLYNL-------QEDAQPQLRSRRVGIVRKLSKRSPPSLVKGFRAKSKARKRAAMVEVAHMARSPPIYT------IRIRTRSTIGAARIP----------------------------KMPEKKK--TERPMDPCRDPITLDDLGSWTWDFRAAEAATPPVSCGGTGTGSKNGGGSAWRGGXXXAREMGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKTPVSSNAVVTYNVESLVLYLLESGDFQ 699
ML RGWVTR+EY Q+L GDR L++L QE ++G+ RKL K++ +V+ RA+ +A V V R+PP+ + ++ R+ G K ++K+ ERP D CRDPITLDDLGSWTWDFRA+EAATPPVSCG T + +K+GGG W+G + G XXXXXXXXXXXXXXXXXXXXXXX S+AVVTYNVESLVLYLLESGDFQ
Sbjct: 43 MLERGWVTRDEYQQLLHGDR-LFSLHKSEMEEQEXXXXXRLRNKIGLRRKLWKQTRIGVVRRARAR-----KAEKVWVKSTQRAPPLPSPHTPPNVQCAHRNKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKKRKQPLAERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKS-TKHGGGGGWKG-----KRFG-----------VGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAVVTYNVESLVLYLLESGDFQ 295
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A7S2UYJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYJ0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.910e-19 Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 628 SSNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSEL 993
S++ YN SL YLL +GDF +P TRRPF+ QL DLD +A R + S++ + KY+E RE+R++L G DRCLG++VS++L +E+ EEA V L+ LFP+F+ +F +L
Sbjct: 13 SNSGCQVYNAASLARYLLSTGDFCDPLTRRPFTEAQLRDLDEIARRDDPDLP-SVLKCKQATPNKYQEIREKRDLLEGTDRCLGEIVSDVLRALEDLAV--EEAQVKLLGLFPEFSSLFQQL 131
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A067CQT9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQT9_SAPPC) HSP 1 Score: 92.0 bits (227), Expect = 7.830e-18 Identity = 55/123 (44.72%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 631 SNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVT-LFPQFAHIFSELK 996
+ +V YN+ESLV Y+L +GDF EP TR PF LA LDA A AG ++ GS V + ++ +A + + + +R+ L+G +RC G+VV+EML IE+ D EE + LV +FP FA ++S+LK
Sbjct: 105 NGTIVVYNIESLVQYILATGDFSEPETRLPFPDAMLAQLDAEAKAAGLEL-GS-VAAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIED--DDGEEGEMRLVMEIFPNFADLYSQLK 223
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A6H5L333_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L333_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 9.640e-17 Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 1
Query: 850 MLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELKE 999
MLVG DRCLGD+VSEMLSTIE++ HEEAH+YL TLFPQFAHIFSE+KE
Sbjct: 1 MLVGTDRCLGDIVSEMLSTIEDNDKSHEEAHIYLCTLFPQFAHIFSEMKE 50
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A4D9CSC2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSC2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.420e-16 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 631 SNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELKE 999
+ + V+Y V SLV YLL +G F+EP TR PF+ L LD+LA RA K YR G+ +Y E RR+ L+G +RC G++V+EML +EES +P E +TLFP ++ ++ E
Sbjct: 173 NGSAVSYRVSSLVDYLLATGKFEEPETRLPFTDADLKTLDSLARRAYLGRKSVWEAKYR-GREQYTEMNFRRDALMGLERCAGELVTEMLLLVEESDEPEEAEMRLALTLFPLLTDLYRQMLE 294
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A8K1CDI6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDI6_PYTOL) HSP 1 Score: 88.6 bits (218), Expect = 2.270e-16 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 628 SSNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELK 996
S+ ++V YNV+SLV Y+L +GDF EP TR PFS L +DA A R AK+ V + + + EQ+ +R+ L+G +RC G+ +++ML +E + DP E ++TLFP F+ IF +++
Sbjct: 137 SNGSIVVYNVDSLVQYILATGDFSEPETRIPFSDDDLRRIDAEAKR--AKLDERSVLEAKHNKHLFDEQKVKRDGLLGLERCAGEFITQMLEVVE-NDDPEEGEMQLIMTLFPSFSSIFEQIR 256
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: G4YJZ0_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YJZ0_PHYSP) HSP 1 Score: 88.2 bits (217), Expect = 2.760e-16 Identity = 47/122 (38.52%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 631 SNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELK 996
+ +VV YNVESLV Y+L +GDF EP TR PFS L +D A++ AK+ + V ++ + K+ EQ+ +R+ ++G +RC + V++ML +E S DP E + ++++FP F+ IF +++
Sbjct: 129 NGSVVVYNVESLVQYILATGDFSEPETRIPFSDEDLRRIDLEASK--AKLSENSVVDAKKNKHKFEEQKVKRDGILGLERCASEYVNKMLDIVE-SDDPEEGEMLLIMSVFPSFSDIFEQIR 247
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A421GM79_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GM79_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.510e-16 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 628 SSNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELK 996
S+ +VV YNVESLV Y+L +GDF EP TR PFS L +D A + AK+ V + + K+ EQ+ +R+ ++G +RC + V++ML +E S DP E + ++++FP F+ IF +++
Sbjct: 118 SNGSVVVYNVESLVQYILATGDFSEPETRIPFSDDDLRRIDQEARK--AKLNEKSVMDAKNNKHKFEEQKVKRDGILGLERCASEYVNKMLEIVE-SDDPEEGEMLLIMSVFPSFSDIFEQIR 237
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Match: A0A2P4WWT0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWT0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.040e-16 Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 628 SSNAVVTYNVESLVLYLLESGDFQEPTTRRPFSLVQLADLDALAARAGAKVKGSLVTSYREGQAKYREQRERREMLVGADRCLGDVVSEMLSTIEESQDPHEEAHVYLVTLFPQFAHIFSELK 996
++ +VV YNVESLV Y+L +GDF EP TR PFS L +D A++ AK+ + ++ + K+ EQ+ +R+ ++G +RC + V++ML +E S DP E + ++++FP F+ IF +++
Sbjct: 126 TNGSVVMYNVESLVQYILATGDFSEPETRIPFSDDDLRRIDVEASK--AKLNEKSIVDAKKNRHKFEEQKVKRDGILGLERCASEYVNKMLEIVE-SDDPEEGEMLLIMSVFPSFSDIFEQIR 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15797.3364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15797.3364.1 >prot_H-paniculata_contig15797.3364.1 ID=prot_H-paniculata_contig15797.3364.1|Name=mRNA_H-paniculata_contig15797.3364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp MLRRGWVTREEYAQILLGDRRLYNLQEDAQPQLRSRRVGIVRKLSKRSPPback to top mRNA from alignment at H-paniculata_contig15797:2013..5984+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15797.3364.1 ID=mRNA_H-paniculata_contig15797.3364.1|Name=mRNA_H-paniculata_contig15797.3364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3972bp|location=Sequence derived from alignment at H-paniculata_contig15797:2013..5984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15797:2013..5984+ >mRNA_H-paniculata_contig15797.3364.1 ID=mRNA_H-paniculata_contig15797.3364.1|Name=mRNA_H-paniculata_contig15797.3364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig15797:2013..5984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |