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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 742 |
| Cds size | 570 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15796.3362.1 >prot_H-paniculata_contig15796.3362.1 ID=prot_H-paniculata_contig15796.3362.1|Name=mRNA_H-paniculata_contig15796.3362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MATQRRTHLVIRGHRNDEGHLNDYDRLQQDLDALQKCVVAKSRLHMNYVF
GCVGQSNFLVNLKNKATRRSVDLIIKSALGAESHTSMVDTRLPGEKFAPG
LRTSKKRRTGSETSHEAPVEATIERHAAQVFRESDGKALLLGVAGKTKSY
SYDRNRTGLVLTETYNRHQNGVTTDQCTPPAPYNTWPSNP back to topmRNA from alignment at H-paniculata_contig15796:181..2699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15796.3362.1 ID=mRNA_H-paniculata_contig15796.3362.1|Name=mRNA_H-paniculata_contig15796.3362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2519bp|location=Sequence derived from alignment at H-paniculata_contig15796:181..2699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTCCTCATATTAGGTTTGACACCTAATGAAGTGCGCGGGGAAATGAGAC
GAAAGTGGTTGGGACTTCATCCAACACCGAGTGAAAGTGACACATACTTA
ATTAAAGTCATCAGTAGCCCTAGTCTAAAAAATCCCGGCTTGTGTTGCAC
CTGCGTCACCAAAGAAACGTATGGCCACTCAACGTAGGACACATCTCGTG
ATCCGTGGACATCGGAACGATGAAGGTCACCTCAACGATTACGATCGACT
GCAGCAGGTATGTCAGGCGCGGATTCATTAATTTCCCGTCTGCCACCTGC
CATAGGTATGCTCGTGACTGAGACATGAGACATGCCGCACCGGCCCTAAC
TTATAAATAATGAGACTAATCAGAACCAGTAGTCTCGATGTGTACCTGGC
CAAGTAGTGCTTGGGGTTACACTCATCGGTTGGAAGCAGAGGCTGCAACG
CTTTCACAGAAATCGATCGGGGTGTTTGGATGGTTAGATGGTAACTCTGC
GCCCTGTACTGAATTACTGTCTGTGTACTGAAGAATTTGTTAGAAGCTCC
AACATCAACTTGGCGATTATAGCGTTGGATGTCTCTCGTGCATGGCACTT
CTGGGCGCCCTTGCGCTAGGCTTCATTGCTGTTATATTACCTGTATCCAG
GATGATATACATATATGGCCGCAGGGAGTTCTCTTTTTTGCAGTCTATTC
GAATTGGAGTGGACCTGTTGACTGAGCTAGCTAATTCGAATGAGGAGTAG
TAAATAGGGATTCGCGTGAAAATCGCTCCTTCGATACCTCACAGGAAATT
TCAACCATCGGCCCTTGTCATATGATGTTCCCACCGAAAACAAAACAATA
TTGCTGTGCTGCTGTGTAATAGTAGAGCAAGCTCGCTACAATGTTCAAAG
AAAAATTGACCAGCCCGTCAGAGAACTCGAAGAAAGAAGAATTACATACC
CGACATCCTGTCAACATCTCGTGCACATATCCGTGAACGTGCGTCAGTGT
ACAGTACAGTACAGTACCGTTTTTTTGCCCGATCTGGGACTGTGTAATAT
CTTGTGGACTTGAATGTATTTTGATGGTCTTTACTCAGGACCTGGACGCT
CTACAGAAGTGCGTTGTGGCGAAGAGCCGACTCCACATGAACTACGTGTT
TGGGTGTGTGGGTCAATCCAATTTTCTCGTCAACCTTAAAAACAAAGCAA
CCCGGCGTTCAGTGGATTTGATAATCAAAAGCGCCCTGGGGGCAGAGTCA
CACACGTCCATGGTGGACACGCGGCTGCCCGGAGAAAAATTTGCACCGGG
ACTAAGAACATCCAAAAAGCGTCGTACTGGCAGCGAGACCTCCCATGAGG
CGCCCGTCGAAGCCACGATCGAAAGACACGCAGCACAAGTCTTCCGTGAA
TCCGACGGCAAAGCGCTCCTGCTGGGTGTTGCAGGCAAAACCAAGAGTTA
TTCGTATGACCGCAACAGGACTGGCTTGGTGCTCACTGAAACATACAACC
GACATCAAAATGGGGTAAGTGAAATTGAACTAAGAATGAGTAGAGGGTGC
TGTTGTTTGAGGAAGCGAATTTGCCCTTTCCAAGCGCACCCCATATGCCA
CGTAGAAGCGCGCTAAATATGTGCCGGGCAATTGCCGCAGAGTAATCTTA
AGGTAGGGTGGGGGTCAAATATTTAACGAAGGCCGCTTAACAAAAAGCGG
TGCAAAAATAACGCGAATCAAAATCATGTCAAGTGCATACGCTTGTGCAC
TCCTGAAGGTGCACAATCCACGAGTTGAAGGCGAATCATTGTGTTTGAGG
GCGAGCAACAAATCCAAGAAAAGTGGGAAAAACGCCCGATCCCCTTCTCA
AAGCGGCTCGCTCGTTGAACAAAGCGGCTCAAATACTCCCCGCCCCTACC
GTAGGATGACTCCGCACGTATCTTGCATGACAGTGCCGTTGCAAGCTTCG
ATTATGCTTCACTTCGAATAGTGTTGATTCACTTCTACGGTGATATTTTT
TTCGTTGCAGCTTTGTGAGGTCTTCACTGCAGACTCGGAACCAGTTACTA
ATGAACAACTTTGGGCTCAGATAACTTCGGGAATGCGACCGAACTTTGTG
TTCAGAAAACTCCAGGAACCTCACGAACTCCAGGAACGTGCTCTCCACAA
TTGGAACGTTCCAATCGGGGCAATGCAGACAGGAAAAGAGTACACTTGAT
GCGCTGAGTAGGGAGACGGCTTTCAGACAAGCACCGCGGGCAGAGTATTA
TTTGCTTGCGTTGTGTGGCCTGAGAAACGATGCCCTCCTAATGGTCACTT
GCTCGCTTCTTATTATTTTTTTCGTTGCTTTCTTCAGAGCTGTTATATTT
TATTTCAGTGCATGTGTGTGTCCCCATCGCTTGTCCAACGATTTTGCCTC
ACACTGAAGAGTTCGTTGGTCCTAACTAAGGCGCTGACCCGCACACGCCT
CTCTATTGGCAGGTCACAACTGATCAGTGCACACCCCCTGCGCCTTACAA
CACTTGGCCTTCAAACCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig15796:181..2699+ >mRNA_H-paniculata_contig15796.3362.1 ID=mRNA_H-paniculata_contig15796.3362.1|Name=mRNA_H-paniculata_contig15796.3362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig15796:181..2699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCACTCAACGTAGGACACATCTCGTGATCCGTGGACATCGGAACGA
TGAAGGTCACCTCAACGATTACGATCGACTGCAGCAGATGGCCACTCAAC
GTAGGACACATCTCGTGATCCGTGGACATCGGAACGATGAAGGTCACCTC
AACGATTACGATCGACTGCAGCAGGACCTGGACGCTCTACAGAAGTGCGT
TGTGGCGAAGAGCCGACTCCACATGAACTACGTGTTTGGGTGTGTGGGTC
AATCCAATTTTCTCGTCAACCTTAAAAACAAAGCAACCCGGCGTTCAGTG
GATTTGATAATCAAAAGCGCCCTGGGGGCAGAGTCACACACGTCCATGGT
GGACACGCGGCTGCCCGGAGAAAAATTTGCACCGGGACTAAGAACATCCA
AAAAGCGTCGTACTGGCAGCGAGACCTCCCATGAGGCGCCCGTCGAAGCC
ACGATCGAAAGACACGCAGCACAAGTCTTCCGTGAATCCGACGGCAAAGC
GCTCCTGCTGGGTGTTGCAGGCAAAACCAAGAGTTATTCGTATGACCGCA
ACAGGACTGGCTTGGTGCTCACTGAAACATACAACCGACATCAAAATGGG
GACCTGGACGCTCTACAGAAGTGCGTTGTGGCGAAGAGCCGACTCCACAT
GAACTACGTGTTTGGGTGTGTGGGTCAATCCAATTTTCTCGTCAACCTTA
AAAACAAAGCAACCCGGCGTTCAGTGGATTTGATAATCAAAAGCGCCCTG
GGGGCAGAGTCACACACGTCCATGGTGGACACGCGGCTGCCCGGAGAAAA
ATTTGCACCGGGACTAAGAACATCCAAAAAGCGTCGTACTGGCAGCGAGA
CCTCCCATGAGGCGCCCGTCGAAGCCACGATCGAAAGACACGCAGCACAA
GTCTTCCGTGAATCCGACGGCAAAGCGCTCCTGCTGGGTGTTGCAGGCAA
AACCAAGAGTTATTCGTATGACCGCAACAGGACTGGCTTGGTGCTCACTG
AAACATACAACCGACATCAAAATGGGGTCACAACTGATCAGTGCACACCC
CCTGCGCCTTACAACACTTGGCCTTCAAACCCGGTCACAACTGATCAGTG
CACACCCCCTGCGCCTTACAACACTTGGCCTTCAAACCCG back to top
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