prot_H-paniculata_contig1579.3358.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1579.3358.1
Unique Nameprot_H-paniculata_contig1579.3358.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length371
Homology
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 247 bits (631), Expect = 1.710e-75
Identity = 134/353 (37.96%), Postives = 209/353 (59.21%), Query Frame = 0
Query:   20 VRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGR-HEKVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMK-ISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            V +L KS YGLKQS   WN+ LD  L  IG   + +D C+Y+  +DG     +VA++VDD+++ G+  EK+   K S ++RF+ K +G L  +L ++V +   +  + I Q +YT  ++K+YG + C+ V TP++   K +SA +  +  N  EY+S VGS+++ S  TRPDI +AV+  A+   +   E ++A KRIFRYL    + G+ +   +N   + GF DADWA D+ DRKST+GY  + NG A+ W  +KQ  V  S+ EAEYVA   A +E +++R LL  +        T + DN+SAI +SK    H R+KHI +++  +R+ + +  L + Y  T   LAD+
Sbjct:   13 VCKLNKSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADL 360          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 250 bits (639), Expect = 9.810e-74
Identity = 137/372 (36.83%), Postives = 218/372 (58.60%), Query Frame = 0
Query:    1 ELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGR-HEKVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMK-ISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            E+++K P  F    ++     +L KSLYGLKQS   WN+ LD  L  IG   + +D C+Y+  +DG     +VA++VDD+++ G+  EK+   K S ++RF+ K +G L  +L ++V +   +  + I Q +YT  ++K+YG + C+ V TP++   K +SA +  +  N  E++S VGS+++ S  TRPDI +AV+  A+   +P  E ++A KRIFRYL    + G+ +   +N   + GF DADWA D+ DRKST+GY  + NG A+ W  +KQ  V  S+  AEYVA   A +E +++R LL  +        T + DN+SAI +SK    H R+KHI +++  +R+ + +  L + Y  T   LAD+
Sbjct:  270 EVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADL 635          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 244 bits (622), Expect = 1.420e-73
Identity = 130/359 (36.21%), Postives = 208/359 (57.94%), Query Frame = 0
Query:   20 VRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHEKV-DGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAP------DRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTT-FFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            V +L++SLYGLKQS   WN T+D F++++G     +D C+Y+ RD  G+  + VA+YVDDLV+   ++++ +  KH+ S+RF    LG L   L +E++  R +  +T+ Q  + + +L ++G  + + V TP +  +K++            +  +  YRS+VG++M+  + TRPD+A AV   ++   DP    + A KR+ RYL      G+ F  + +  G+ G+ DADWA D+E R+ST+GY    NGG I W  +KQ+ V  SS EAEY+A  EA +E ++L+  L  +G          + DN+ +I L+K    H RTKHI +R+  +RE + +G + L YV T D LAD+
Sbjct:   33 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADM 388          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 256 bits (653), Expect = 8.950e-73
Identity = 140/372 (37.63%), Postives = 220/372 (59.14%), Query Frame = 0
Query:    1 ELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGR-HEKVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMK-ISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            E+++K P  F    ++   V +L KSLYGLKQS   WN+ LD  L  IG   + +D C+Y+  +DG     +VA++VDD+++ G+  EK+   K S ++RF+ K +G L  +L ++V +   +  + I Q +YT  ++K+YG + C+ V TP++   K +SA +  +  N  EY+S VGS+++ S  TRPDI +AV+  A+   +P  E ++A KRIFRYL    + G+ +   +N   + GF DADWA D+ DRKST+GY  + NG A+ W  +KQ  V  S+ EAEYVA   A +E +++R LL  +        T + DN+SAI +SK    H R+KHI +++  +R+ + +  L + Y  T   LAD+
Sbjct:  884 EVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADL 1249          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A2P6SBD8_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SBD8_ROSCH)

HSP 1 Score: 247 bits (631), Expect = 3.790e-72
Identity = 149/373 (39.95%), Postives = 216/373 (57.91%), Query Frame = 0
Query:    1 ELFVKLPPEF--SPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHE-KVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            E+++  PP +    F      V RL+K+LYGLKQ+   W + +D F V+ G      +  LY    D G   L++ +YVDDL+ T  +   +D FK S  + F    LG +   L IE+ +  ++  I ISQ  Y  EVL+R+    C  V TP E  +K++    GK  N+T Y+ +VGS+M+ +  TRPDI +AV   +R ME P  +   A KRI RYL   ADLGI F  K     L GF D+D+A D++DRKST+G+V     GAI W  +KQQ+VT S+ EAE+VAA  +  + I+LR +LG +    +  T  + DN S+I+LSK S  H R+KHI VR+  +R+ ++EG + L Y  ++DQ+AD+
Sbjct:  299 EVYINQPPGYVKQVFENQ---VYRLKKALYGLKQAPRAWYSHIDAFFVKEGFCKCPYEHTLYTKLGDDGRI-LVMCLYVDDLIYTSNNSLMLDAFKKSMMEEFDMTDLGLMRYFLGIEILQ--SSAGIFISQKKYALEVLERFKMGNCNSVCTPTEVGLKLTKNGSGKRVNATLYKQIVGSLMYLTT-TRPDIMFAVSMVSRYMEKPMEDHLVAVKRILRYLKGTADLGI-FYKKFQSSNLCGFTDSDYAGDMDDRKSTSGFVFMMGSGAISWSAKKQQIVTLSTTEAEFVAAASSSCQAIWLRRMLGVLQNQQQSPTIIYCDNSSSIKLSKNSVLHGRSKHIDVRYHFLRDLMKEGAIELVYCPSNDQVADI 663          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A1J6HVV2_NICAT (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=2 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6HVV2_NICAT)

HSP 1 Score: 239 bits (610), Expect = 3.930e-72
Identity = 138/352 (39.20%), Postives = 204/352 (57.95%), Query Frame = 0
Query:   20 VRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHEKV-DGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            V +L+K+LYGLKQ+   WN+ +D ++   G      +  LY+     G+  LLV +YVDDL+ TG + K+ + FK + ++ F    +G +S  L I+V++ +  D I ISQG Y +E+LK++  D C  V TP+E  +KIS    G++ N T ++S+VGS+ + +  TRPDI Y V   +R ME P        KRI RY+    D GI +    +     G+ D+DWA D++DRKSTTG+V      A  W  +KQ +VT S+ EAEYVAA       I+LR+LL  +    +  T  F DN+SAI L+K    H R+KHI  R+  IR+ I   V+ L +V++ DQ+AD+
Sbjct:   33 VMKLKKALYGLKQAPRAWNSRIDKYIQANGFSKCPHEHTLYVKIAKNGDI-LLVCLYVDDLIFTGNNPKMFEEFKEAMAREFEMTDIGLMSYYLGIQVQQRK--DGIFISQGEYAKEILKKFEMDNCNPVSTPVECGVKISKHGDGENVNPTFFKSLVGSLRYLTC-TRPDILYGVGLVSRFMEAPTTSHLKVAKRILRYIKDTLDYGILYSSSKDSK-FVGYCDSDWAGDIDDRKSTTGFVFFLGNSAFTWNSKKQPIVTLSTCEAEYVAACSCVCHAIWLRSLLEELHQPQKDATKIFVDNKSAIELAKNPVFHERSKHIDTRYHFIRDCISNKVVELEHVKSQDQIADI 379          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 246 bits (629), Expect = 5.940e-72
Identity = 132/353 (37.39%), Postives = 209/353 (59.21%), Query Frame = 0
Query:   20 VRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHE-KVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKIS-APDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            V RLR+S+YGLKQS   WN+ LD  L  +G   +T D C+Y+ +++GGE   ++AVYVDD+++ G+++ K++  K + +++F+ K +G L   L ++V     +  I I Q +YT+ VL+R+G +  +   TP+    K+  A D  +  +   Y+  VG +++ S +TRPDIAYAV   AR   DP  E + A KRI RYL+   D+G+ + G        G+ DADWA D++DRKST+GYV + +  AI W  +KQ  V  S+ EAEY+A   A +E ++L+ LL  +     G      DN++AI ++K +  H R KHI +++  IRE +    + L Y  T++ +AD+
Sbjct:  124 VCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADI 474          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: UPI001E1CA5CE (uncharacterized protein LOC120969904 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA5CE)

HSP 1 Score: 252 bits (644), Expect = 2.090e-71
Identity = 152/371 (40.97%), Postives = 219/371 (59.03%), Query Frame = 0
Query:    1 ELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHE-KVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            E++V  PP +     +   V RLRK+LYGL+Q+   WN  LD  L  +G D   ++  +Y  R   G+  LLV VYVDDLVITG  + ++D FKH  +  FR   LG LS  L IEVR+GR  D IT+ Q +Y +++++R G +EC     P+E ++K+S   + +  +STEYRS++G + +  + TRPDI++AV   +R ME P  + +   KR+ RY++   D G  +        L G+ DAD A D++DR+STTG +    G  + W  +KQ++V  SS EAEYVAA  A  + I+L  L+G +            DN+SAI LSK    H R+KHI +R+  IRE + EG + +NYV T+DQLADV
Sbjct:  981 EVYVVQPPGYVTPGEEGK-VLRLRKALYGLRQAPRAWNAKLDESLRSLGFDRCPSEHAVY--RRGEGDKLLLVGVYVDDLVITGADKTEIDAFKHQMTTLFRMSDLGELSYYLGIEVRQGR--DRITLCQAAYAKKLVERAGLEECNPGNLPMEARLKLSRDSKERPVDSTEYRSIIGGLRYL-VHTRPDISFAVGYLSRFMEAPASDHYVVVKRLLRYVAGTLDYGCAYIRGKGTPELLGYSDADHAGDIDDRRSTTGVLYFLGGSPVSWQSQKQRVVALSSCEAEYVAATTAACQGIWLARLIGEMLNTDVRPPRLLVDNKSAISLSKNPVFHDRSKHIEIRYHFIRECVEEGRIDINYVCTNDQLADV 1345          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A182GC29_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GC29_AEDAL)

HSP 1 Score: 239 bits (610), Expect = 4.050e-71
Identity = 140/371 (37.74%), Postives = 202/371 (54.45%), Query Frame = 0
Query:    1 ELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHE-KVDGFKHSTSQRFRTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            E+F++ PP F+   R+   V RL+KS+YGLKQS   WN  L   LVE+G + S TD CLY     G    LLV  YVDD++I    E ++D       + F    LG  S  L +++     +   ++S G Y   V  R+G  E +   TP+E     S     K  +  EYRS+VG++++ S+  RPD+A +V    R++  P   D+ A KR+ RYL    +  +++G    G  L G+ DADWA D   RKSTTG+V    GGA+ W  R+Q  VT SS+E+EYVA  EA +E+I+LR+LL  +G    G  T   DN+S I+  K      R+KHI V+   +++   +G + L Y  T+D +ADV
Sbjct:  106 EIFMRQPPGFAVKGRE-GMVCRLKKSIYGLKQSARCWNQRLHSVLVEMGFEQSATDPCLYTKVVSGKRVYLLV--YVDDIMIDCEDEAQIDSVYEQLKRYFEVTNLGEPSDFLGLKIEC--KDRKYSVSVGGYIDRVADRFGLREAKKAKTPMEEGFASSEDKSPKLSDDNEYRSLVGALLYISVCARPDVAASVAILGRKVSSPTEADWVAAKRVVRYLKATKEWKLSYG--DAGGQLVGYSDADWAGDAGTRKSTTGFVFNYAGGAVSWVSRRQSCVTLSSMESEYVALSEASQELIWLRSLLADMGEQVEGPVTVMEDNQSCIQFVKSDRKSRRSKHIEVKQHFVKQLCEDGSMKLQYCPTEDMVADV 469          
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 236 bits (601), Expect = 4.180e-71
Identity = 134/353 (37.96%), Postives = 208/353 (58.92%), Query Frame = 0
Query:   20 VRRLRKSLYGLKQSGCNWNNTLDYFLVEIGPDSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRH-EKVDGFKHSTSQRFRTKYLGPLSRVLEIEV-RRGRTNDNITISQGSYTREVLKRYGFDECRGVPTPLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARRMEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYLRALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREWIREGVLALNYVQTDDQLADV 370
            V +LRK+LYG KQ+   W + ++ + ++   +    +  L++ ++  G++ L+V++YVDDL+ TG     ++ FK S  + F    LG +   L +EV + GR    I I+Q  Y  E LK+YG + C  V  P+    K+S    G + + T ++ +VGS+ + +  TRPD+ Y+V+  +R ME+P  +   A KRI RY+      GI +  +  G  L GFVD+D+A DV+DRKST+GYV    GGA+ W  +KQ +VT S+ EAE+VAA     + ++LR +LG IG+     TT F DN S I+LSK    H R+KHI VR+  +R+ + E V+ L +  T+DQL+D+
Sbjct:    7 VYKLRKALYGSKQAPRAWYSRIEGYFMKEKFEKCYYEHTLFVKKE--GDSILIVSLYVDDLIYTGNSLTMLEEFKQSMMKEFAMTDLGKMKFFLGVEVIQDGR---GIFINQQKYAEETLKKYGMEGCNAVKNPIVPGNKLSRAGGGDAADPTMFKQLVGSLRYLTA-TRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDI 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1579.3358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9M6E1_PARCT1.710e-7537.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9HZ03_PARCT9.810e-7436.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB98_PHYRM1.420e-7336.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT8.950e-7337.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2P6SBD8_ROSCH3.790e-7239.95Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A1J6HVV2_NICAT3.930e-7239.20Retrovirus-related pol polyprotein from transposon... [more]
A0A7D9KES8_PARCT5.940e-7237.39Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001E1CA5CE2.090e-7140.97uncharacterized protein LOC120969904 n=1 Tax=Aegil... [more]
A0A182GC29_AEDAL4.050e-7137.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2JBX5_9BRAS4.180e-7137.96Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..152
e-value: 2.6E-28
score: 99.3
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 129..354
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 129..354
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 23..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1579contigH-paniculata_contig1579:20773..21963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1579.3358.1mRNA_H-paniculata_contig1579.3358.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1579 20773..21963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1579.3358.1 ID=prot_H-paniculata_contig1579.3358.1|Name=mRNA_H-paniculata_contig1579.3358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=371bp
ELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGCNWNNTLDYFLVEIGP
DSSTTDSCLYISRDDGGETNLLVAVYVDDLVITGRHEKVDGFKHSTSQRF
RTKYLGPLSRVLEIEVRRGRTNDNITISQGSYTREVLKRYGFDECRGVPT
PLEGKMKISAPDRGKSGNSTEYRSMVGSIMHASIRTRPDIAYAVHQAARR
MEDPFREDFSACKRIFRYLSTVADLGITFGGKSNGHGLEGFVDADWAEDV
EDRKSTTGYVIKRNGGAIRWCCRKQQLVTWSSIEAEYVAAREAGKEVIYL
RALLGSIGFYCRGNTTFFRDNESAIRLSKGSGAHCRTKHIGVRWQGIREW
IREGVLALNYVQTDDQLADV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like