mRNA_H-paniculata_contig15788.3356.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15788.3356.1
Unique NamemRNA_H-paniculata_contig15788.3356.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 6.580e-95
Identity = 169/234 (72.22%), Postives = 186/234 (79.49%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGEKGTKVYDEWM 702
            G IP ANPTE E SHVFVFNNIFFS+AADSPDAYKAVSG++AARKSASQDLASVVALN L EA HPQLSIKTLAT VVD+ GRR+IAQSLVPGILNGDQTNKVVYGAMEHGQPLR N +VS LL+ VG RLMIAERE+DAVPIK          S+   +    E   ++    +  E  +  PATV +TGAVEMKGIVGSDGRSYLLDVSR+TPRDANWVRG KGT  Y+EWM
Sbjct:  446 GFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAVHPQLSIKTLATAVVDFGGRRLIAQSLVPGILNGDQTNKVVYGAMEHGQPLRENDKVSSLLKDVGQRLMIAEREIDAVPIK------KPPFSSSSTSAGGVEESAQKTSPGSGDETAESAPATVKITGAVEMKGIVGSDGRSYLLDVSRVTPRDANWVRGAKGTGGYNEWM 673          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2S3S9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.780e-43
Identity = 106/243 (43.62%), Postives = 140/243 (57.61%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEA--------------------FHPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
            GH+   NPTE   +HV+VFNN+FFS+A DS D YK   G+ AA KSA  DL ++  ++ L  A                      P   + TLATT+VD   +GRR++AQS+VPGIL  +  +K+VYGA+EHG   +++ ++  L+  V  +  IA RE++AVP+K   G    + +A     AATE            E     P  VTV GAVEMKGIVGSDGR Y+LDV RL+PRDANWV
Sbjct:    5 GHVTPINPTEPSRNHVYVFNNMFFSYAVDSKDGYKVFKGDEAAAKSARHDLRNISLIDRLQRAAVEPPSDQPEDAAEVSPPAVVPPGHRLCTLATTLVDLPCAGRRIVAQSIVPGILQSENLSKLVYGAIEHGHEYKADPDMVTLVGAVTDKFNIAPREIEAVPLKKEDGPPGPEKAA-----AATE------------EDGGTEPGPVTVCGAVEMKGIVGSDGRKYVLDVVRLSPRDANWV 230          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2S3S6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.010e-43
Identity = 106/243 (43.62%), Postives = 140/243 (57.61%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEA--------------------FHPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
            GH+   NPTE   +HV+VFNN+FFS+A DS D YK   G+ AA KSA  DL ++  ++ L  A                      P   + TLATT+VD   +GRR++AQS+VPGIL  +  +K+VYGA+EHG   +++ ++  L+  V  +  IA RE++AVP+K   G    + +A     AATE            E     P  VTV GAVEMKGIVGSDGR Y+LDV RL+PRDANWV
Sbjct:  639 GHVTPINPTEPSRNHVYVFNNMFFSYAVDSKDGYKVFKGDEAAAKSARHDLRNISLIDRLQRAAVEPPSDQPEDAAEVSPPAVVPPGHRLCTLATTLVDLPCAGRRIVAQSIVPGILQSENLSKLVYGAIEHGHEYKADPDMVTLVGAVTDKFNIAPREIEAVPLKKEDGPPGPEKAA-----AATE------------EDGGTEPGPVTVCGAVEMKGIVGSDGRKYVLDVVRLSPRDANWV 864          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2D7Q1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7Q1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.450e-40
Identity = 102/260 (39.23%), Postives = 140/260 (53.85%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAF-------------------------HPQLSIKTLATTVVDY--SGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYDE 696
            GH+P  NPTE    HV+VFNN+FFS+  DS DAYK + G+ AA KSA  DL +V  L+                                P   + TLAT +VD   +G+R++AQS++PGIL GDQ +K+VYGA+EHG   + +  +  LL +V  +L IA R + A+P+     A    + +    G  +  K E+EE              V +  AVE+KGI GSDGR Y LD+ RLTPRDANW+ +   GT V++E
Sbjct:  679 GHVPPINPTEPTRQHVYVFNNLFFSYGVDSKDAYKVLGGDGAAVKSARHDLRNVQLLDYYQRTIGLGTVDKEKDDVTPPTGCFAEPGTVSPDERLCTLATAIVDLPCAGKRLVAQSIIPGILQGDQLSKLVYGAIEHGVKYKVDPGMKNLLDEVASKLYIAPRTIAAIPMPA---AKDDPIQSGQLNGVDSVDKDEEEEE------------VVGICNAVELKGICGSDGRKYALDILRLTPRDANWLPKASGGTGVFEE 923          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S1ZYD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYD8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.890e-40
Identity = 100/234 (42.74%), Postives = 143/234 (61.11%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSP-DAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLR-QVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYD 693
            GH+   NP E   SHV++ NNIFFS A D+  D +K   G+ AARKSAS+D + + AL  L     P+L   TLAT +VDY G R++ QS+VPGIL+G++T+ ++YGA+E   PL  +KE+ +LL   +G  LM+A R +  +P+     +  +KL        A E+  +  E   EG+ P     T  + G +E+K I GSD R Y+LD++RLTPRDANWV + E GT V++
Sbjct:   39 GHVTPMNPNEPTRSHVYLHNNIFFSRAVDAGVDTFKITQGDKAARKSASRDASCMGALFKLDI---PELH--TLATVLVDYLGTRLVCQSVVPGILHGERTHTLLYGAVEATSPLVWDKEMHDLLETSLGKGLMVATRPVPTLPLSDERMSEIEKLKT-----VALEAINKDVEEKTEGKSP-----TTNICGPIEVKAIRGSDQRKYVLDLTRLTPRDANWVPKSEGGTGVWE 257          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A836CKQ1_9STRA (Clustered mitochondria-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.450e-40
Identity = 101/248 (40.73%), Postives = 143/248 (57.66%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPI---KGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPAT-------VTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGE----KGTKVYDEWM 702
            G++   N  E+  SHV+VFNNIFFS A D+ +  +AV+G+  A KSA  DL +V A++           + TLA  VVDY GRR++AQS++PGIL GD T K+VYGA+E   PL+ + ++ E LR++  +L+IAER + A+P+   +G G    KK    G        +K +                       V++ GAVE+KGI G D R Y+++V RLTPRDANWV G+    KGT VY +W+
Sbjct:  471 GYVTPINGMESPRSHVYVFNNIFFSNALDTKEGGRAVNGDPMAHKSALHDLHNVKAISMFETP-----GLHTLAMAVVDYLGRRIVAQSVIPGILQGDSTFKLVYGAVEPSHPLKLDADMHEQLRKLAPKLLIAERTLPAIPMPAAEGEGEEGGKKEKEGGEGXXXXXXQKGEXXXXXXXXXXXXXXXXXXXGDQEVSLCGAVELKGIEGYDARRYIMEVIRLTPRDANWVDGDGSEHKGTGVYTDWL 713          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S2KYX4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYX4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.310e-38
Identity = 92/225 (40.89%), Postives = 138/225 (61.33%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSP--DAYKAVSGEAAARKSASQDLASVVALNSLS-EAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQ-VGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV 663
            GHI   NP E+  SHV++ NNIFFS A D+   D Y+  +G+ AARK+AS+D +++  L+ L  E  H      +L T ++DY G R++ QS++PG+L+G+  +KV+YGA+E G PL S+ ++ +L+   +G    I  R +  VP+     AA K   +K  A A+    K       E E  ++TP TV + G +E+KGI+G+D R Y+LD++RL PRDANWV
Sbjct:  495 GHITPMNPNESARSHVYLHNNIFFSRALDNGMYDTYRVATGDNAARKAASRDASTIGILHRLDVEGLH------SLGTVILDYLGTRLVCQSVIPGLLHGENCHKVIYGAVETGSPLASDADMHKLMEDTIGKNYWIGSRAVPTVPLSDERVAAAKAALSKTLALASLSPTKRG--SITESEAKEDTPPTVPICGPMEVKGILGADNRRYVLDLARLAPRDANWV 711          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: A0A7S4SDJ8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDJ8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 8.020e-38
Identity = 100/234 (42.74%), Postives = 143/234 (61.11%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSP-DAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLR-QVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWV-RGEKGTKVYD 693
            GH+   NP E   SHV++ NNIFFS A D+  D +K   G+ AARKSAS+D + + AL  L     P+L   TLAT +VDY G R++ QS+VPGIL+G++T+ ++YGA+E   PL  +KE+ +LL   +G  LM+A R +  +P+     +  +KL        A E+  +  E   EG+ P     T  + G +E+K I GSD R Y+LD++RLTPRDANWV + E GT V++
Sbjct:  170 GHVTPMNPNEPTRSHVYLHNNIFFSRAVDAGVDTFKITQGDKAARKSASRDASCMGALFKLDI---PELH--TLATVLVDYLGTRLVCQSVVPGILHGERTHTLLYGAVEATSPLVWDKEMHDLLETSLGKGLMVATRPVPTLPLSDERMSEIEKLKT-----VALEAINKDGEEKTEGKSP-----TTNICGPIEVKAIRGSDQRKYVLDLTRLTPRDANWVPKSEGGTGVWE 388          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: G4ZAU5_PHYSP (Clustered mitochondria protein homolog n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZAU5_PHYSP)

HSP 1 Score: 149 bits (375), Expect = 2.080e-37
Identity = 95/232 (40.95%), Postives = 139/232 (59.91%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVGSDGRSYLLDVSRLTPRDANWVRGEKGTKVYDE 696
            G+IP  NP + +S+HV+VFNNIFFS + D   A K   GE  A  +A++DL  V A N +         + TLATTVVDY G R+IAQSL+PGIL GD  +K+VYG+++HG+ + +N  + EL+ + G +L IAER +  +P+    G + ++L+A+          KEQE +       + +    T+ GAVE KGI GSDGR Y+LD+ R+TP+D  + +  +  K   E
Sbjct:  464 GNIPPINPMDDKSAHVYVFNNIFFSVSIDGK-ATKEDGGEENAYSAANRDLQGVKAFNEVDVR-----GLHTLATTVVDYLGVRVIAQSLIPGILLGDAASKLVYGSVDHGKTIAANSSMHELMLKAGEKLHIAERSI--IPL----GKSDEELAAE----------KEQESLGVTVSGGEASTDVATICGAVEAKGIQGSDGRQYVLDLVRITPKDWTFYKNREAAKKNTE 673          
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Match: M4BM91_HYAAE (Clu domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM91_HYAAE)

HSP 1 Score: 148 bits (374), Expect = 2.840e-37
Identity = 94/220 (42.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query:    1 GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQDLASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQTNKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAATKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATV---TVTGAVEMKGIVGSDGRSYLLDVSRLTPRD 651
            G+IP  NP + ES+HV+VFNNIFFS + D      A  G+  A  +A++DL  V A N +         + TLATTVVDY G R+IAQSL+PGIL GD  +K+VYG+++HG+ + +N ++  L+ + G +L IAER +  +      G + K L+A             +EE  A G  P+   AT    T+ GAVE KGI GSDGR Y+LD+ R+TP+D
Sbjct:  463 GNIPPINPMDDESTHVYVFNNIFFSVSNDGKPIKDAAQGDENAYSAANRDLVGVKAFNEVDVC-----GLHTLATTVVDYLGVRVIAQSLIPGILIGDSASKLVYGSVDHGKTIAANSKMHALMLEAGSKLHIAERTIKPL------GKSEKDLAA-------------EEEQKALGVAPESGEATTDPTTICGAVEAKGIQGSDGRLYVLDLVRITPKD 658          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15788.3356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH17_9PHAE6.580e-9572.22Clu domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2S3S9_9STRA1.780e-4343.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2S3S6_9STRA2.010e-4343.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D7Q1_9STRA2.450e-4039.23Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1ZYD8_9STRA2.890e-4042.74Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A836CKQ1_9STRA4.450e-4040.73Clustered mitochondria-domain-containing protein n... [more]
A0A7S2KYX4_9STRA1.310e-3840.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4SDJ8_9STRA8.020e-3842.74Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
G4ZAU5_PHYSP2.080e-3740.95Clustered mitochondria protein homolog n=5 Tax=Phy... [more]
M4BM91_HYAAE2.840e-3742.73Clu domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15788contigH-paniculata_contig15788:1359..3784 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.6
Seed ortholog evalue9.6e-84
Seed eggNOG ortholog2880.D7G8X4
KEGG koko:K03255
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular distribution of mitochondria
EggNOG OGsKOG1839@1,KOG1839@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Exons4
Model size702
Cds size702
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15788.3356.1prot_H-paniculata_contig15788.3356.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15788 1359..3784 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929259.6055322-CDS-H-paniculata_contig15788:1358..16121622929259.6055322-CDS-H-paniculata_contig15788:1358..1612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 1359..1612 -
1691480791.046258-CDS-H-paniculata_contig15788:1358..16121691480791.046258-CDS-H-paniculata_contig15788:1358..1612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 1359..1612 -
1622929259.623693-CDS-H-paniculata_contig15788:2395..25551622929259.623693-CDS-H-paniculata_contig15788:2395..2555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 2396..2555 -
1691480791.0585191-CDS-H-paniculata_contig15788:2395..25551691480791.0585191-CDS-H-paniculata_contig15788:2395..2555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 2396..2555 -
1622929259.6350334-CDS-H-paniculata_contig15788:3270..34111622929259.6350334-CDS-H-paniculata_contig15788:3270..3411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 3271..3411 -
1691480791.0666986-CDS-H-paniculata_contig15788:3270..34111691480791.0666986-CDS-H-paniculata_contig15788:3270..3411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 3271..3411 -
1622929259.6457336-CDS-H-paniculata_contig15788:3637..37841622929259.6457336-CDS-H-paniculata_contig15788:3637..3784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 3638..3784 -
1691480791.075285-CDS-H-paniculata_contig15788:3637..37841691480791.075285-CDS-H-paniculata_contig15788:3637..3784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15788 3638..3784 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15788.3356.1

>prot_H-paniculata_contig15788.3356.1 ID=prot_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
GHIPAANPTETESSHVFVFNNIFFSFAADSPDAYKAVSGEAAARKSASQD
LASVVALNSLSEAFHPQLSIKTLATTVVDYSGRRMIAQSLVPGILNGDQT
NKVVYGAMEHGQPLRSNKEVSELLRQVGHRLMIAEREMDAVPIKGTGGAA
TKKLSAKGAAGAATESKKEQEEMTAEGEYPDETPATVTVTGAVEMKGIVG
SDGRSYLLDVSRLTPRDANWVRGEKGTKVYDEWM
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mRNA from alignment at H-paniculata_contig15788:1359..3784-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15788.3356.1 ID=mRNA_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2426bp|location=Sequence derived from alignment at H-paniculata_contig15788:1359..3784- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTCACATTCCAGCAGCGAATCCTACAGAGACGGAGAGCAGTCATGTCTT CGTGTTCAACAACATTTTCTTCAGTTTTGCGGCCGATAGCCCAGACGCGT ACAAGGCTGTCTCAGGAGAAGCCGCTGCGCGCAAGTCCGCGTCACAGGTG TGATAACAGGCCCGGGGGTGTTGTGTAGTGGATCGGTGTTTGGTGACAAC TTTTGTCGATGACGGGGAGTGGACAGCATGTTGCAGTTATTTGCAAGGAC AGTAATGAGAGGGTCAATTACGAAAAGTATACTGAGAGTCAATTTCGTCT CTCTTTGCCTGGGCATGTGTTTGATTTCTATTTGTGTGTGTGTTTCGATG TGTGCACTTTTTGCTCTTTCAAGGATCTCGCCAGCGTGGTGGCGCTTAAC TCCCTCTCCGAGGCGTTCCACCCTCAACTGAGTATCAAGACTCTGGCCAC CACGGTCGTCGACTACTCGGGGAGACGGATGATCGCTCAATCTCTAGTGC CAGGGATCCTCAACGTGAGCATGCCTTCTCCAACGGTCCTGATTCAACAG TCCTTGTTGTCATTATTCTATACGGTATTGGGGACGTGGCAAGCGTGCGT GGTGGTCGTTTTGGCAGAGATTTTCAAACCTGTACTCGATAAATCCTGAA AAATGAATCATCGAGTATAGCGCGCGACTGTAAGTGCAGCGAGTCCGTGT CGGTTGAGGATAAGCACGAACTGCGTCGGTGTGAATCCGTGGCCACACTC TACCGCTAGTTATCAGTAAATGAAAAATGTCGATTGTTTGCTGATGAGAA TATGTCGCTGTGGGGTAACCGTGAGCTTTATATCGCCCCGGTATGATATA GATGTGTGGCAGAAATGCTGTCTGTTGTGACAAATACGTGCCGTGCAGGT ACCGATGTATGTATATTTGTCTCCTTTTATCGATATTCAGTCGTGGCTGT GATCCTTTCAGCCTCTTGAGGGTCCACATTAGAAAGCGCTTTTATGCGCC CTGGACACACCATCTGCGCAGCTCCGAAAGAAAAATACTTCGTAAAACGA ATGACGAGGGGATCAACGCTTCATTTTAGGTACCCGCGCTCTCTGAGGTC ATGAGTCAATCTCCTTGTTTTGGTCCGGGGAATGGATAATGCTTCAAAGG CACAGTCTTGTATATAAAAAATCCGAATGATTAATTTTCTGTCCCCTGCT CACCTCATGAATTAAATCGAATCTGACAGGGAGACCAAACGAACAAGGTT GTGTACGGGGCGATGGAACACGGGCAGCCGTTGCGCTCCAACAAGGAGGT GTCGGAGCTACTCCGACAGGTGGGGCACCGCCTCATGATTGCCGAGCGCG AGATGGACGCCGTTCCCATCAAGGGCACCGGTGGTGCAGGTGCAGCTGCT GCTGGTGAGTGGGATTTGCAGTCGGTCGTCGTCGTTGTTGTCGTCGTGTT GTATATTTTGGGCCTCATAATGTTTTGCCTGTCGTGGTTCTTAAAAGACC GTTGATCACGCGCCCTCGTGAGGACGAAGCTTTTTTCCTCTCGTTTCGTT TTCTTCTTTTTTTTTTCTCTCTTTTTTGTGTCTTGGCAAAAAGAAAATAA CACCCTCTCATGGTTGGTCATTGTCTAGTTGTAGTTGGTTATTCAGGCTT TAAACGCTCTCTTCATTTGATCATTTTGCATTGCGCCTCCCAAACTTGAG ATATATATATATATATCGTAAAATGGAGCTCTGTTGAGAGGTCGAAGGGA AAAAAATCCCTTCTCCCCTCCCTTTCCCAAGAACGGAAGACATCATCGTC ACCGCTTCATATTGGTGAAGATCTCACCACCGCATCTGTGTAGTCCGTAA AACATGAACCCTCCACGCCCAACATGAAATAAAAACTTGAACACTTAATC GTTGTCCTGTTGTGGTCCCTCATCTATGCTTCGAACGCTCGGTTCACTTT ATTACTCTTTACTGCTTGCTTTTTATACATGCACACATGTATAGATGTAT AGATAGATGATAGATGATAGATCCCGGTATAGGTAAAGCAGTGTTTAGTA GGGGTTACTGGAAAAAGAACCTCAGGGCCTCACTCGCCCCTACTCGGGAA ATACGATCGTCACCACCATCATCACTATCGACTATATCGTCACCGTTGAT TTCCGTTTGTTCCCCTCGACAGCGACAAAGAAACTCTCCGCTAAAGGGGC AGCAGGAGCAGCAACAGAGAGCAAGAAGGAGCAGGAAGAGATGACGGCAG AGGGAGAATACCCAGACGAGACCCCTGCGACTGTTACGGTAACGGGAGCG GTGGAGATGAAAGGGATTGTGGGTAGCGACGGGCGCTCGTATCTTCTGGA CGTGTCGAGGCTGACACCCCGCGATGCTAACTGGGTGCGCGGGGAGAAGG GGACAAAGGTGTACGACGAGTGGATG
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Coding sequence (CDS) from alignment at H-paniculata_contig15788:1359..3784-

>mRNA_H-paniculata_contig15788.3356.1 ID=mRNA_H-paniculata_contig15788.3356.1|Name=mRNA_H-paniculata_contig15788.3356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig15788:1359..3784- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTCACATTCCAGCAGCGAATCCTACAGAGACGGAGAGCAGTCATGTCTT
CGTGTTCAACAACATTTTCTTCAGTTTTGCGGCCGATAGCCCAGACGCGT
ACAAGGCTGTCTCAGGAGAAGCCGCTGCGCGCAAGTCCGCGTCACAGGGT
CACATTCCAGCAGCGAATCCTACAGAGACGGAGAGCAGTCATGTCTTCGT
GTTCAACAACATTTTCTTCAGTTTTGCGGCCGATAGCCCAGACGCGTACA
AGGCTGTCTCAGGAGAAGCCGCTGCGCGCAAGTCCGCGTCACAGGATCTC
GCCAGCGTGGTGGCGCTTAACTCCCTCTCCGAGGCGTTCCACCCTCAACT
GAGTATCAAGACTCTGGCCACCACGGTCGTCGACTACTCGGGGAGACGGA
TGATCGCTCAATCTCTAGTGCCAGGGATCCTCAACGATCTCGCCAGCGTG
GTGGCGCTTAACTCCCTCTCCGAGGCGTTCCACCCTCAACTGAGTATCAA
GACTCTGGCCACCACGGTCGTCGACTACTCGGGGAGACGGATGATCGCTC
AATCTCTAGTGCCAGGGATCCTCAACGGAGACCAAACGAACAAGGTTGTG
TACGGGGCGATGGAACACGGGCAGCCGTTGCGCTCCAACAAGGAGGTGTC
GGAGCTACTCCGACAGGTGGGGCACCGCCTCATGATTGCCGAGCGCGAGA
TGGACGCCGTTCCCATCAAGGGCACCGGTGGTGCAGGGAGACCAAACGAA
CAAGGTTGTGTACGGGGCGATGGAACACGGGCAGCCGTTGCGCTCCAACA
AGGAGGTGTCGGAGCTACTCCGACAGGTGGGGCACCGCCTCATGATTGCC
GAGCGCGAGATGGACGCCGTTCCCATCAAGGGCACCGGTGGTGCAGCGAC
AAAGAAACTCTCCGCTAAAGGGGCAGCAGGAGCAGCAACAGAGAGCAAGA
AGGAGCAGGAAGAGATGACGGCAGAGGGAGAATACCCAGACGAGACCCCT
GCGACTGTTACGGTAACGGGAGCGGTGGAGATGAAAGGGATTGTGGGTAG
CGACGGGCGCTCGTATCTTCTGGACGTGTCGAGGCTGACACCCCGCGATG
CTAACTGGGTGCGCGGGGAGAAGGGGACAAAGGTGTACGACGAGTGGATG
CGACAAAGAAACTCTCCGCTAAAGGGGCAGCAGGAGCAGCAACAGAGAGC
AAGAAGGAGCAGGAAGAGATGACGGCAGAGGGAGAATACCCAGACGAGAC
CCCTGCGACTGTTACGGTAACGGGAGCGGTGGAGATGAAAGGGATTGTGG
GTAGCGACGGGCGCTCGTATCTTCTGGACGTGTCGAGGCTGACACCCCGC
GATGCTAACTGGGTGCGCGGGGAGAAGGGGACAAAGGTGTACGACGAGTG
GATG
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