prot_H-paniculata_contig15779.3350.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig15779.3350.1
Unique Name	prot_H-paniculata_contig15779.3350.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	130

Homology

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: D7FKW2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.800e-63
Identity = 103/134 (76.87%), Postives = 113/134 (84.33%), Query Frame = 0

Query:    3 SIVIHH------KRPTTRHVRIHC-RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELENEST 129
            S+V+HH      KR    +++    RITQLRWETGPV+PQELQQSLSARE +LFN YD ILT++ +GLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLV  G LQELENEST
Sbjct:   61 SLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 194

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2XZV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.050e-37
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 0

Query:    4 IVIHHKRPTTRHVRI----HC----RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELENE 127
            IV+HH+    R+ RI    H     ++  LRWETGPV+P+ LQ +LS  ER+ F+ YD +++ Y EG+ +DLT D QPPKEL +EVR L DCGEIMT+ G++ L++G+THLLRR D E+L+  G L+++ ++
Sbjct:   64 IVVHHQ-ALMRNKRILLAYHMYRLEKLKALRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCEGVGIDLTQDQQPPKELFIEVRALEDCGEIMTEQGTINLEKGSTHLLRRCDAENLIKQGMLEQISDD 194

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2CTQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTQ8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.820e-34
Identity = 56/101 (55.45%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   24 QLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            QLRW+ G V+P E + ++ A E   F+ YD +LT+Y   + +D+T+D+ PPKEL VE+RVL++CGEIMT+ GSV L++GTTHLLRRSDVE LV  G L+E+
Sbjct:   54 QLRWDLGTVLPPEYRSNMHAHETSFFSKYDKLLTNYISDVGVDVTSDMMPPKELMVEIRVLAECGEIMTETGSVNLEKGTTHLLRRSDVESLVRQGYLEEI 154

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A3R7MJX0_9STRA (Sld5 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.220e-33
Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            +I  LRWETG +IP  L Q+L  RE  LFNAYD +LTDY     LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L+  G L+++
Sbjct:   88 KIKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 191

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2RC62_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RC62_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.390e-33
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            R+  LRWE G VIP ++++ +SA E   F++YD IL  Y   +++DLT+D+QPPK L +EVRVL DCGE++TD GS+ L + TTH LRRSDVEHL+  G L+++
Sbjct:  100 RLINLRWEIGSVIPTDMKRKVSAEEGRFFDSYDDILQRYMRTVDVDLTSDMQPPKNLFIEVRVLEDCGEVLTDSGSINLAKNTTHYLRRSDVEHLIRQGMLKQI 203

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A067C3N3_SAPPC (Sld5 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3N3_SAPPC)

HSP 1 Score: 121 bits (304), Expect = 2.700e-32
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELEN 126
            +I +LRW+TG V+P+ L  +L ARE   F+ YD +LTDY     +DL AD+QPPK+L +EVRVL DCGEI T++G+V L   +TH LRR+DVE L+  G L +L++
Sbjct:   87 KIKELRWQTGSVVPEHLAPALHAREVQFFHGYDQLLTDYMSSFGIDLAADMQPPKDLFIEVRVLKDCGEIYTENGAVHLRANSTHFLRRTDVEGLIRQGMLVQLKH 192

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: W2KQ83_PHYPR (Sld5 domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2KQ83_PHYPR)

HSP 1 Score: 120 bits (302), Expect = 5.420e-32
Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            +I  LRWETG +IP +L Q+L  RE   FN YD +LTDY     LDL+AD++PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L+  G L+++
Sbjct:   87 KIKALRWETGTIIPAQLAQNLCQREVQFFNQYDQLLTDYMAEFELDLSADMKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: G4YZC9_PHYSP (Sld5 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP)

HSP 1 Score: 120 bits (300), Expect = 1.030e-31
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            +I  LRWETG +IP  L Q+L  RE   FN YD +LTDY     LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L+  G L+++
Sbjct:   85 KIKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 188

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: K3X6H6_GLOUD (Sld5 domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6H6_GLOUD)

HSP 1 Score: 119 bits (299), Expect = 1.540e-31
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 0

Query:   21 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELEN 126
            +I  LRWETG +IP  L  +L  RE   F +YD +LTDY     +DL+AD +PPK+L+VEVRVL DCGEIMT++G V L+  +TH LRR DVE L+  G L+++++
Sbjct:   87 KIKNLRWETGTIIPASLAPNLCQREVQFFQSYDQLLTDYMADFEIDLSADTKPPKDLYVEVRVLRDCGEIMTENGLVNLEANSTHFLRRVDVEQLIRQGLLEQIKH 192

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BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A2R5GNH7_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNH7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.800e-31
Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 0

Query:   22 ITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 124
            I  LRW+ G  IP++L++ L A E   F+AYD IL+DY   ++LDL AD++PPK L+VEVRVL DCGEI T  G V L + TTH LRRSDVEHL+  G L+++
Sbjct:   94 IGNLRWDAGSAIPEDLRRKLCAEEAQYFSAYDNILSDYMREVDLDLAADMEPPKNLYVEVRVLRDCGEIDTVSGPVVLAKDTTHNLRRSDVEHLIRQGALEQV 196

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKW2_ECTSI	4.800e-63	76.87	Sld5 domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A7S2XZV1_9STRA	3.050e-37	48.48	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2CTQ8_9STRA	6.820e-34	55.45	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A3R7MJX0_9STRA	1.220e-33	56.73	Sld5 domain-containing protein n=5 Tax=Phytophthor...	[more]
A0A7S2RC62_9STRA	2.390e-33	52.88	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]
A0A067C3N3_SAPPC	2.700e-32	51.89	Sld5 domain-containing protein n=2 Tax=Saprolegnia...	[more]
W2KQ83_PHYPR	5.420e-32	53.85	Sld5 domain-containing protein n=15 Tax=Phytophtho...	[more]
G4YZC9_PHYSP	1.030e-31	54.81	Sld5 domain-containing protein n=1 Tax=Phytophthor...	[more]
K3X6H6_GLOUD	1.540e-31	51.89	Sld5 domain-containing protein n=2 Tax=Pythiaceae ...	[more]
A0A2R5GNH7_9STRA	1.800e-31	55.34	DNA replication complex GINS protein PSF1 n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.1030		coord: 3..63 e-value: 6.9E-9 score: 37.9
IPR005339	GINS complex, subunit Psf1	PANTHER	PTHR12914	PARTNER OF SLD5	coord: 7..125
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 20..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15779	contig	H-paniculata_contig15779:2933..4005 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15779.3350.1	mRNA_H-paniculata_contig15779.3350.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig15779 2933..4005 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig15779.3350.1 ID=prot_H-paniculata_contig15779.3350.1|Name=mRNA_H-paniculata_contig15779.3350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
TESIVIHHKRPTTRHVRIHCRITQLRWETGPVIPQELQQSLSARERDLFN
AYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLD
RGTTHLLRRSDVEHLVLHGQLQELENEST*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005339	GINS_Psf1
IPR036224	GINS_bundle-like_dom_sf