mRNA_H-paniculata_contig15779.3350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: D7FKW2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI) HSP 1 Score: 199 bits (507), Expect = 4.800e-63 Identity = 103/134 (76.87%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 7 SIVIHH------KRPTTRHVRIHC-RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELENEST 387
S+V+HH KR +++ RITQLRWETGPV+PQELQQSLSARE +LFN YD ILT++ +GLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLV G LQELENEST
Sbjct: 61 SLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 194
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2XZV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.050e-37 Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 1
Query: 10 IVIHHKRPTTRHVRI----HC----RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELENE 381
IV+HH+ R+ RI H ++ LRWETGPV+P+ LQ +LS ER+ F+ YD +++ Y EG+ +DLT D QPPKEL +EVR L DCGEIMT+ G++ L++G+THLLRR D E+L+ G L+++ ++
Sbjct: 64 IVVHHQ-ALMRNKRILLAYHMYRLEKLKALRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCEGVGIDLTQDQQPPKELFIEVRALEDCGEIMTEQGTINLEKGSTHLLRRCDAENLIKQGMLEQISDD 194
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2CTQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTQ8_9STRA) HSP 1 Score: 124 bits (312), Expect = 6.820e-34 Identity = 56/101 (55.45%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 70 QLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
QLRW+ G V+P E + ++ A E F+ YD +LT+Y + +D+T+D+ PPKEL VE+RVL++CGEIMT+ GSV L++GTTHLLRRSDVE LV G L+E+
Sbjct: 54 QLRWDLGTVLPPEYRSNMHAHETSFFSKYDKLLTNYISDVGVDVTSDMMPPKELMVEIRVLAECGEIMTETGSVNLEKGTTHLLRRSDVESLVRQGYLEEI 154
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A3R7MJX0_9STRA (Sld5 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.220e-33 Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
+I LRWETG +IP L Q+L RE LFNAYD +LTDY LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+ G L+++
Sbjct: 88 KIKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 191
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A7S2RC62_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RC62_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.390e-33 Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
R+ LRWE G VIP ++++ +SA E F++YD IL Y +++DLT+D+QPPK L +EVRVL DCGE++TD GS+ L + TTH LRRSDVEHL+ G L+++
Sbjct: 100 RLINLRWEIGSVIPTDMKRKVSAEEGRFFDSYDDILQRYMRTVDVDLTSDMQPPKNLFIEVRVLEDCGEVLTDSGSINLAKNTTHYLRRSDVEHLIRQGMLKQI 203
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A067C3N3_SAPPC (Sld5 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3N3_SAPPC) HSP 1 Score: 121 bits (304), Expect = 2.700e-32 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELEN 378
+I +LRW+TG V+P+ L +L ARE F+ YD +LTDY +DL AD+QPPK+L +EVRVL DCGEI T++G+V L +TH LRR+DVE L+ G L +L++
Sbjct: 87 KIKELRWQTGSVVPEHLAPALHAREVQFFHGYDQLLTDYMSSFGIDLAADMQPPKDLFIEVRVLKDCGEIYTENGAVHLRANSTHFLRRTDVEGLIRQGMLVQLKH 192
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: W2KQ83_PHYPR (Sld5 domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2KQ83_PHYPR) HSP 1 Score: 120 bits (302), Expect = 5.420e-32 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
+I LRWETG +IP +L Q+L RE FN YD +LTDY LDL+AD++PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+ G L+++
Sbjct: 87 KIKALRWETGTIIPAQLAQNLCQREVQFFNQYDQLLTDYMAEFELDLSADMKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: G4YZC9_PHYSP (Sld5 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP) HSP 1 Score: 120 bits (300), Expect = 1.030e-31 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
+I LRWETG +IP L Q+L RE FN YD +LTDY LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+ G L+++
Sbjct: 85 KIKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 188
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: K3X6H6_GLOUD (Sld5 domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6H6_GLOUD) HSP 1 Score: 119 bits (299), Expect = 1.540e-31 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 61 RITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQELEN 378
+I LRWETG +IP L +L RE F +YD +LTDY +DL+AD +PPK+L+VEVRVL DCGEIMT++G V L+ +TH LRR DVE L+ G L+++++
Sbjct: 87 KIKNLRWETGTIIPASLAPNLCQREVQFFQSYDQLLTDYMADFEIDLSADTKPPKDLYVEVRVLRDCGEIMTENGLVNLEANSTHFLRRVDVEQLIRQGLLEQIKH 192
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Match: A0A2R5GNH7_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNH7_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.800e-31 Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 64 ITQLRWETGPVIPQELQQSLSARERDLFNAYDGILTDYAEGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVLHGQLQEL 372
I LRW+ G IP++L++ L A E F+AYD IL+DY ++LDL AD++PPK L+VEVRVL DCGEI T G V L + TTH LRRSDVEHL+ G L+++
Sbjct: 94 IGNLRWDAGSAIPEDLRRKLCAEEAQYFSAYDNILSDYMREVDLDLAADMEPPKNLYVEVRVLRDCGEIDTVSGPVVLAKDTTHNLRRSDVEHLIRQGALEQV 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15779.3350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15779.3350.1 >prot_H-paniculata_contig15779.3350.1 ID=prot_H-paniculata_contig15779.3350.1|Name=mRNA_H-paniculata_contig15779.3350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp TESIVIHHKRPTTRHVRIHCRITQLRWETGPVIPQELQQSLSARERDLFNback to top mRNA from alignment at H-paniculata_contig15779:2933..4005- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15779.3350.1 ID=mRNA_H-paniculata_contig15779.3350.1|Name=mRNA_H-paniculata_contig15779.3350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1073bp|location=Sequence derived from alignment at H-paniculata_contig15779:2933..4005- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15779:2933..4005- >mRNA_H-paniculata_contig15779.3350.1 ID=mRNA_H-paniculata_contig15779.3350.1|Name=mRNA_H-paniculata_contig15779.3350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig15779:2933..4005- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |