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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 497 |
| Cds size | 495 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1577.3346.1 >prot_H-paniculata_contig1577.3346.1 ID=prot_H-paniculata_contig1577.3346.1|Name=mRNA_H-paniculata_contig1577.3346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
MDIASSFKAAHNSTSKKRARTSGRGSPRAASANANSVKPQRATMDSVGQS
AVRRRLSRGALGAIGVSEAGDDLGASPPRRHVQTDATSTSDLPPTPSSAG
SRSSSGRSCWSSNSGAAGSWKGWAAASGASASKRAAIGTYNPGAMGLRAV
LRQKRLDLSKNVTVD back to topmRNA from alignment at H-paniculata_contig1577:6261..15342- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1577.3346.1 ID=mRNA_H-paniculata_contig1577.3346.1|Name=mRNA_H-paniculata_contig1577.3346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9082bp|location=Sequence derived from alignment at H-paniculata_contig1577:6261..15342- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACATTGCTTCGTCGTTTAAAGCGGCTCATAATTCCACTAGGTCAGT
TTTTTGTAGACGGGAGGGGTGGGAGAGAGTACAGTAGTTAGTCATGCGAG
ACGTGTTTTTTGTGCAAATTGATGTGTTTTTGGAGGATTGGCGATTAATT
GTAAACCTTTGAGCATTAATCGGATACAACAAGCTGGTCTCGCCAAGAGG
CATAAGAATTCTTCACCAAACATTTAATCCACAGTTTCTTCGAGTTATAA
GGGCGCAAAGTAGCGTCACTTTTTGGATTGAGAAGACAAAATAACTCTGC
GCGGGATAATTTTGTTTTTGTGTCTCTAGTGTCAAAGTATTTGGAATTTA
GAATAACGGAGGATACTTAGATCCCTTCAATTTGTGAAAAAAATTCAGGA
ACCGAAAAGAGCGCACTTCAGCGTTTGATCAGCTTGTTGATGCACAAAAT
TGATGGGGTTTTTTCTTGTTTCATAGCTCGATCTAAACGTGGGACAACAG
CAAGAAAACGAAATCAAAGCAATTTGGCCTAGAATGTAAGAATTAAAACG
AAAAGTTATTCTCGAACGTAACGTTCGAGCGGCGACGAGCTTTCACGCGA
TATAACGACCATGAGGCTTCTTCACACACAAACACACACACACACACACA
CACACACACACACACACACCAATTGTTTTAATCAAAATGATGTCGTTTCC
GCTAATTCTCATTACCCTAGATTCAAGCAGGAAATGCTACCCGAAATCAA
CCTCCTAACTGTTTGCCATGATCCTCGTATCCCTATCTTACGGATGTACT
GCGACATTAGATACCATTGACAGTGCCCGGAAGCGCCACAACGAACACCC
TCCCTGGAGGAAAACCCACTCGAACGACAAAAACGTTGGTAAAAGAAAAA
TCCTTCTTCGGGAGAAACCTCTTCGAGAATCCTGGATTTCGTTTATTTTG
ATACCATCGAAATCGAAAACAAAAATGAAAAACGGCGGTTTGTTTGTAAT
GTTCATACGAAAATTGATATTCCTTTTCATGCGTAAATTGTAATATGCAT
GTGCTCGAGGAGGTAAGTCATTTTCGTTGGATAGGATTTGGGGGAGGGGG
GAGACGTCATTGACTCGAAGAGGGTAATTCAACAGTACGTGCCGTAGTCG
GTGCTGAGGAGATGATAAGTATGGGGTTGTGTAAAAATGAGGGTAACTGT
TCTCGACCGACATTGAGTGGTTATTACCCCTTTTATGGTGTTACCTAAGG
TGATCGCCACATGACCGCTCCCTTGCTTCGAGTCTTACTTTGCAAGACTT
CAGCTTACGGGCAACCGAAACCCGACAGGCTGGCCGCGAGGTGTTGAGAT
TTCTTTTCTTCATAAGAGTTCTGAACATGTTGCTTTTGTCCCCCACCATA
GTTTCGACTTTTGTGTTGGGCGCTTAACGTTTTCTTCATTGGTCTGTCGA
TGCTGGGGGTTGGACCCATACTCTTGAGGACTACAAGCAGACAAGTTATC
TGTCGGTATCGCCGTTGTGAAAATGATGGTAACTGTCCCCGATAGACTTT
GGGTGATTATTAACCTTTTTAAGGTGTTACCTAAAGTGACCATTCCAATT
TTTCCGAAAAAATAGGTCAAATATCTAAAATGAATATTGTATTATTTTGG
CATATATCGCACTTGCGCAATTCAGATATTATAAAAAAAACCTTACGAGA
TAAAGTACGAGAAGGAGAAGCTGGGAAGGGCGACCGCCCTCCATCGCAAT
ATTGTCGTGTTCTTCGTCACAATACGTTTTATTGTCGCTACTAATTATTG
GTAGTTGTCGTGGATGTATTAGGCGTGAACCGAACGGAAATATAGCAATA
TTTCACCCCTTGGACAAATACGAATAAAATAAATGAATAAAACGAAAACT
CTGCAATGAATACTATATCTGTTTTGAGTTGGGGAAGGTATCCACATGAC
GCAAGTAATATGCAGTGTACTCCATGTACCATGAAGCATCGAAAAGCTCG
GGCAGATAGAGTATTCAATCTATACGATACCATCCGGAAAATAGACAGGG
CCTGCATGTGTGACTGTTCGCCGGGTGTACGATCAACTGGTGATCATCTG
TAGAGTGACCATTCATGGACTTATCAACGAATATGGACACGTGCGTACCC
AAGATAAATAATGATAATTCGAGATAGCTGCGAATGCTCCATTGGTCTTT
GTCCGAGGGATGCAATATTTTCTTTAGAGTTCATTGTATCTCGTGAGTAT
TCCATCTGCAGGATAACATACATCATAAGCCGTTCTTTCGAAAATCGGTG
TTCCAGACTCCAATCCAAAACCGATCTTCCAAAGTGGTGAACTGGCATCT
GAAAAAAATACATTGATATGTAAACGAATTGGCCTTCTTCTAAACGGTAT
TCACTCACCTGGGTGTAGACGCTGTCCTGTTGATTGGATCTACCTCTGTA
GATAAATGGATCTTGGTCGGTGGAGGTCATTAATACAGGCGGCACCCTAC
GTATAACTCGTTCTCTCGGAATTCATAGATTCCAGAAATACGAAACCACA
GTGAATGCGTGATTACCGGTACTCGTTTTTGCTCTCCAAGCCCCTCTTAC
GTTGGTCAATATTCACCGGCTCTTATCGTCAGTATATGAAGCTAGCTTTC
TAGTACAGTATCGTGGCAAATACGTGCAGTCCCCCCTCCCCTCCCCCACC
ATGGATCCAGCAGCTTGAAGATGGTGAGCATACCTCCACATTGTTTCATG
GCTCTTGTCATGTATTCTAACGCAATTTATGCCTATCTGCTGGTACTGTA
GACTCGCTCTTCACCCCCCTCGGCTGTGCTATACGCGCTCGTACCCCTAC
CATGGCAGCAAAAAGCGCGCCAGGACGTCAGGCAGGGGGTCACCGAGAGC
AGCGTCCGCAAACGCCAATTCGGTGAAACCCCAAAGGGCCACCATGGACA
GCGTGGGGCAGTCAGCCGTGCGAAGGAGGCTCTCGAGGGGAGCACTCGGA
GCAATCGGGGTTTCCGAAGCAGGGGACGACCTAGGCGCGTCCCCTCCCAG
GAGACATGTACAGGTAAAACTTTGTTATATTCCGGAAGACCTGCAATAGA
CAAGCGTACACTCTGCCTGTATCCAAGCGCTTTCGTGGTAAATGACCTCG
CTTTTTCGTTCACTTTGGCCCGATTTCGCAAGCGAGCCCGTTTCTTGTCT
CCCCTGGAATTGTTTTTGTGGGGAATAAAACGGATTTTGCGCCTATTTTC
CGATAGTGCGGAAAGATGTGGACCCCCTTGAGTTTTAGGGAAAGTTTTCC
GGAGCTTGACAACGAGAAATCAACGACGATTAGAGATAGCGTTTATTCAC
TCATACTACTGCGGTGAATATAGCAGGATTATTAGGTGTATCTTGGCGGG
TCGTGTTACTGTTTCTTACTCAGGGGCGGTCGTTCCTGTCTTTTTTCGTC
GTCTAATGCTACTGTGTGCTGCCGCGTCCGAATCTGCGCTTTATCGAATG
ACAAATTTCAGATATTGATTTGGAGTATATACAAATATTCGCATATTGTC
TCCATCTTGACAAAAAAAACATTAATTGCAGGGTTGTTGGTTGGTCGAGG
GAGAAGAAATGTGCCGATGGTTGGGCGCATTCTACAGACTGGACCCTCGA
CCCTACACATGTTGCACAGACCTCATAATCTGGTATAACACCTTTGCAAA
AAGTTCACAGCTCAACTGTCGGACGCGTGATTTTTGTATGTACCTAACAC
CTATTTCAGTATTGATGACAGGAACACCCATAAACCAGCAAAAAGGTAAC
AACTCTGTGTTGAAACGGTCAAATCGGTTGATTCTAGTATGAAATACCTC
GTGGGTGCTGCACTATAGCACATGTAAAGAATAAGGACGCTCCGGTTCTG
CTTCTGATAAAAACGAATGTCCTGTTGTTTTGGATAGGGGGTAGTGCAGT
AGTATCCCCCGGCGGGGGAGGAGAAAGTATTCCCTTCTCCTCTCTCCGAC
CGTGCTACGAGTGAACGACACACGGAAATACTCAGGGGTCGGGTTCTGAA
AACAACTAAAAAAAGGAATTGTGACAAGCTGAGGACAGTACTTACAGGTT
AACTTGAAGCTCTGCTGTAGTAGAAGTTGACGTTAACCGAATTGTACTTG
TATGAAGCAAAAAAAAGCTTTACATTACTAATAATAATAACATGTTTCTA
TTTGTCTATATACCTATTGGCCATTCCTGTAATTATTCAAATACCATGGG
AATTTCTTTTATCATATACTAAAAATTTTAATTCAATACAATTAATATTT
GACCCACAACTTGAAAATTATTTAACTTTTATATATAAAATTAGTATAAT
CATAAATGTGAGTTATCCTGTTTTACTAACATTAAATTTAATATTATCCT
CTATTCAAATTAAAACTTTAACAATAGATTTTTGCTCTTTTTTTATACAT
ATATATATACTACTACTAGTAGTAGTAGTATAGTCACAGTTACGTCCTTG
CAGTCCTACTCCAGTGGTTTGTCTTTGTACACATTAAGCCATTCTCCAGA
ACCCACGACCCACTCACAAGGGCTCGCTACGCTCGCGTGTAGGTGCCATG
TCTATGAAGATTCACTGTCAGTTGTTACTTGATTATAGAATGAAACAAAT
GTTCCAAAATGACCATCATCATAACCACCACAGCGGGGATTATTATTGGA
ACATGACATTTTTCTCGTGAGTAGATGGGCACATACCCAACATTTTGACC
GCGTTGACGCTTTTGTGTGTTTTATTCCTCGATCCTTAGCTTTACGCGGA
ATCGTCTGCGTGAGTTCACAAATAATCGATTTTCCTTTTTACCCTTGAGA
TACAAATCCGGATAATTTTCTCTCTGTCGTAAAGCAATTGGTGCGAGAAA
TAATAGGGACATGCATACACTTGAGTTATATTACGATAGACAGGTGAGTC
TTCTGGAGTATGACAATCTCCTTGAAGTGGCTATCAACATGCATGCATAA
ATACATACCTATACACATCTCGTCCAGGTTGCCCTTCTTTCATGTGTCTG
TTTTTTCCCTGACATGTCACGGGGAGGCGTTCGCTTGAACGAACGCTTCT
AAGTTTCAAAGCTGATAACACGGTACCATGCCTTTTGGGTGCAGTAAACG
TGGTGATAGGTACCACCTTTTATCATGAGAAAAACTATTCATATTGAACT
ATATATACATATATTTCTTTTGCGGACTAAGACAACGTTGAAAACTTACC
AAATACAAGAGATATGATAAATAAATCAGGGTATAAAAAAACAAATGGGA
AAAAAAAGGGGGGGAACCTACCGAAAAAAACAATCAGGAGATTTAAAAAA
AAAAAATCATTAACCAACAATAAAGAGAAAAATATGTGTAGATCCCACAC
ATTCAAAATATCAAAAACTTACCGTTGCCGCCGTAATATCGCCTCCAACG
CAATCAAGACTGATGCTACCAGCACCAGCGACTTGCCCCCTACTCCATCA
AGTGCCGGCAGCAGGAGCAGCTCGGGAAGATCATGTTGGAGCAGTAATAG
TGGCGCGGCGGGGTCTTGGAAAGGGTGGGCGGCAGCGTCCGGGGCATCGG
CATCGAAACGCGCCGCGATCGGGACGTACAACCCTGGAGCGATGGGTCTC
AGGGCTGTTCTTCGGCAGAAGCGGTGAGCAGTAGATACCGCGATTCTTGT
TTTGTTTCGTGCTCAGGAGACCAGCTAGAAACCTATAACCTTTCACCCTC
TGGAGAATGACGAATACCAGCACTTGGAGCATTCAGAACGAACGTGAACA
AGTATTCGCTTGATTATTCAGAATGTGCGGGCACATATCGAAGTGTGTAA
GATTTGAATGACCAGCTAAAAACAACACTGCGAGAAATCAGTTTGAAACG
CTGCAGAAGCCAGATGTACACTTTCGCTGAATGTTTTACGTTTTATTTAA
TATACTCCATGCGATAGGTAACGGCGGTTATGTTTGGCAAATTATATCTC
CAGATCTAAGACTGTTCAGAAGCTGCGGGTGGAATCGTATGAAAGCTGAA
CTCTGAGAGACTCATATGCGCTATTTCGAATTGCCTTCCAATTTCTGTAT
CAGGATTAATGGCCGCTCAAGGGTGGGCTAATTTCGACCGTTTTCCTTGT
TTGTTCCATTTTTCACGTTTTTTCAGTGGGAAAATACGAAAATGGGCGAA
ATCGTGCCCTTTTTTCGCCCGATTTTGTTTTGTGCACCGCGCGCGTTCCT
GGTGGGTTTCGCCAATTTCCATGAAATTTTAGAGATCAACCTCCAAACAT
GTAGGATTGTAGCTAAAAAGTATAATCGGGGATAGTTACGTGCCTCTATA
AACTCAACCGACTTTACTTTTTGGCATAGATGGAGTATACGGAATTAAGT
GCCGACTTCTGTTTATCTGTTCTGCTATTATTGGGGGAAATTGTAGATGG
TCTAGGACACACTGAAAAGACGTGCTCATGTTTGAGAATCTTGAGGCGAA
TACTTGATATTTTCGTCGCAAATGGTCATGCTCCAAGTTTTGTGTTCGCC
ATTCCTCATTCTCCGAGGGGCGAAACCATCACTGATATATACGTATGAGC
CGCTTCAACTGGAGAGTGTCTTGGTTATAGTGTTGGATCATTTCGGAACA
ATGTGTTTTCGCCGCTGTGTTTGGGGGTAGCGAATTTAAATTTGCTTCTT
TTTCACATGCAAATTGCTTATTCGGTGCCTTGAGCTGGTGCAATGTCAGT
ACCAAAGGTCAGCTTCGCACTTGAACTCTTTAGGCGTCTACAGTAGCTCA
AAAAGTAGAGCTTATCATCATTTTGACCCGTCCTGTCAGTTGAAACGGCT
CTATACCGGACTGTATCACCGCGACTTTTGTATTTATTCACTTCGGTTCT
GCTGCGATACCTCCTTTGATGCTTACTCCACCCTATTCCTCGTCCTCCAT
AATTTCGAGCTAAGAGGGAAGAACAAAACGATGCCTTAGAACAATGCTTT
TAGCCCTCAAGGGGCTCACACCTCGAAAATCTTCTGTTTGAGATCTTCTT
CTGGGGCGTGTGTCTTTCAGAGCAATATTGCGCTACATTGTGGAAAATGG
CTAGAGTAGAAGCGATGAAGTAGTTGATTTTTCCCCGCTGAAATGAGCAG
TGGTTTGACTGACTCACCGGTATATAGTCTTTGGCTGAATAGAACGATGG
TTAGTCCGTGCAGGTGAAATTCAGATTTGTAAAAGAATATTGCGCTCCGA
AGGAATTAATTGATTAGTTGATCATAGTAATAAATTTATAGCTGATAGCA
CTAGACGCTAGTAGTAGGGGGCTTGAGGTGTTTAATGCAATCGGAGCTGT
AACATAGTCGGCTTGCTCTATCTTATGCACAACCTCGACACACACGACCA
GATCAATAATAGAGTTTGCGGGCAGGGTTGGTTCTGCCAGAATACTTTTA
ATAATTAATGGTGAAGTATAGAGTCAACGAATATGATAGCCCTCTAGGTA
GAGCGCGACTGACCCTGTGCTACCTGAAAAGACAATGCTGAACAAAATAA
ACATGCTTAGCTCTACCCCCTTCAAGTTCGGTGCTCCTAGGGTCAAGACG
AGCAGAGAAAACAATTGGGGTATTTCGAAAACTCAGAAAATTTCATTATT
TCGTGTCTTTAAAAAAGAGCCAAAATTTACGCAAAAAAGCGACGAACCAT
CATCTATCGTCTACCAGTTCGGAAAAAACAAAATTTGAACGTATTCTTGA
GCACGTTTGGCTTTGACTTGACACGAAAATGTACAATTCCCCAAATTTCC
CCTCTGCTAGTAATGACGCTTAGGCGCAACCAACAGAACGCACCCCGGGG
ACTCTGCTTTTGACATTCCCCATGTAGGCTCTGTCAGTCTCGCTTCCCCA
ATATAACACCTTGACAAGCTGTTGTCCTACGATTTTACAATGCTAATTAA
GAGATCTACGCGTAGTGTGAGAAAATGCAAGTTTCCTCCTCCCCCACACC
CAGGATTTTTCCGGGATTTTTCTACGATCATTTCGGGATCATCCAGATTG
ATCCAACACCTTGCCACTTTTTCGACAACTTCATGACCTTCCGTCTCCCC
TCTCTATGTTCACGTGTAATATATCGTTTAGTATGCATATAAGTACTATA
GATGCATGTTTAGAGCACGTTCCTGACGTTCCTGGGTTCCTGAACCCCAG
TTCCCTACACGACAACCATCATTATCGGAACAGGGTTTCTAGCTCGCCTT
CGACCCTAGATGACCAGTTCTTCAGCTACAGAATAGACGTCAAGTACATG
CTTCACACTAGAGCCCAATACTTAGAACTAGCATCCGGAGCAGGTGCTGT
CCCCTCGAGAGCCAGTCTCTCCTAGGAGCATCGCGTGTCAACACCTTCAA
AATTACAATACGTTTTTGTTTGTTTTTTAACCCCCGGAAGGCTAAGGCAA
AAACCTCTATCCGATGCTTCCATACCGAAGTACGTCTACATTTCCTTGTA
CAGAACAGAGCTACTTGTTCCTCATTACAACGCGTTTCCACTCATCTTGA
CAAAACTCCCCTCCTAATCCCCACCACCAGAAATAGTAGAACGGGAAACG
ACGCCTAAATATTGACAGAATTACACGAGTAGGGAGTTGTCGCTGTTCAG
ACAACTAGTCAGCCAGCTACAGAGAGTATATGCAGTAAAGACAGAGAGTT
AACGTGGTTCTAAGCACAACGACGGCGGCGTTCGATGATACTGTTGAATT
TTGCTATTGTTCCAAATCCGGCTTCATTATTCGTTCCGAAACAGCCTCTT
CAAGCGGCACCTAAAGGTATGAAAGCACCGTTATTTAGTATCGAATCAGA
CAATTACTTTCGTACAGAAAACGACGAACATTTCGCTCGAGGGGTTTTCA
CAGCGAATATGGTAAAATATATGTTTTCCTCTTCTGTGCAGGTATAGAAT
GTAATTAACAAATGTTTTCACAATTTTCTCTCTCGTATTTTTTACCCCCC
CAATCGTCAATGTACACATTCCATCTATTTACGTGCTCGACCAATCACCA
GCCTGGATCTTTCGAAGAATGTAACTGTCGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1577:6261..15342- >mRNA_H-paniculata_contig1577.3346.1 ID=mRNA_H-paniculata_contig1577.3346.1|Name=mRNA_H-paniculata_contig1577.3346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig1577:6261..15342- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACATTGCTTCGTCGTTTAAAGCGGCTCATAATTCCACTAGATGGAC
ATTGCTTCGTCGTTTAAAGCGGCTCATAATTCCACTAGCAAAAAGCGCGC
CAGGACGTCAGGCAGGGGGTCACCGAGAGCAGCGTCCGCAAACGCCAATT
CGGTGAAACCCCAAAGGGCCACCATGGACAGCGTGGGGCAGTCAGCCGTG
CGAAGGAGGCTCTCGAGGGGAGCACTCGGAGCAATCGGGGTTTCCGAAGC
AGGGGACGACCTAGGCGCGTCCCCTCCCAGGAGACATGTACAGCAAAAAG
CGCGCCAGGACGTCAGGCAGGGGGTCACCGAGAGCAGCGTCCGCAAACGC
CAATTCGGTGAAACCCCAAAGGGCCACCATGGACAGCGTGGGGCAGTCAG
CCGTGCGAAGGAGGCTCTCGAGGGGAGCACTCGGAGCAATCGGGGTTTCC
GAAGCAGGGGACGACCTAGGCGCGTCCCCTCCCAGGAGACATGTACAGAC
TGATGCTACCAGCACCAGCGACTTGCCCCCTACTCCATCAAGTGCCGGCA
GCAGGAGCAGCTCGGGAAGATCATGTTGGAGCAGTAATAGTGGCGCGGCG
GGGTCTTGGAAAGGGTGGGCGGCAGCGTCCGGGGCATCGGCATCGAAACG
CGCCGCGATCGGGACGTACAACCCTGGAGCGATGGGTCTCAGGGCTGTTC
TTCGGCAGAAGCGACTGATGCTACCAGCACCAGCGACTTGCCCCCTACTC
CATCAAGTGCCGGCAGCAGGAGCAGCTCGGGAAGATCATGTTGGAGCAGT
AATAGTGGCGCGGCGGGGTCTTGGAAAGGGTGGGCGGCAGCGTCCGGGGC
ATCGGCATCGAAACGCGCCGCGATCGGGACGTACAACCCTGGAGCGATGG
GTCTCAGGGCTGTTCTTCGGCAGAAGCGCCTGGATCTTTCGAAGAATGTA
ACTGTCGACCCTGGATCTTTCGAAGAATGTAACTGTCGAC back to top
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