|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1080 |
| Cds size | 1080 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1577.3345.1 >prot_H-paniculata_contig1577.3345.1 ID=prot_H-paniculata_contig1577.3345.1|Name=mRNA_H-paniculata_contig1577.3345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp
SENVGRSGGAGIQGPRAADDGAVVDLASYMSACPEPSRQPQPPPQEPQQQ
QQQVFDFAAFSYNPNANPSPPISDSCTTPNITAATTTNDSNNTAKTVGSS
CSPLFPSSQQLHPWDGGCGDDQVVNGREEGDDQQQRCRRKWRVPMTGTMG
ELNSAGAGTRMKSVESAQGLGRQAIEPKTMVAAPSTSTNNSLINTDTRSW
DDLLRGRSTFLPHPPHRGVAPPPMVDPVGNVSGQRVPWQVQRRPVDRTIE
DYADADQGSFIEGKGSMWTTGDSYWGSSGGGDGQTGYSLVQGQIPQGQVF
QPPHTPSTSSWPQDAQYNCSFFAVQSKNDDRLRDSENSGGSGGGSEIDTR
AVVVPTPRR* back to topmRNA from alignment at H-paniculata_contig1577:839..5316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1577.3345.1 ID=mRNA_H-paniculata_contig1577.3345.1|Name=mRNA_H-paniculata_contig1577.3345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4478bp|location=Sequence derived from alignment at H-paniculata_contig1577:839..5316- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGAAAACGTCGGCCGATCGGGTGGAGCGGGAATCCAGGGACCGAGGGC
AGCCGACGATGGCGCAGTGGTGGACCTTGCTAGCTATATGTCCGCCTGCC
CTGAGGTAAATGAATACTGTAAAACCCTCCCCGTATTCTCGGCTCCCCTA
TGTCCCCATTTATCCATTTCTTCCGGCTTCCTTTCAGGATTTTAGCAGAT
TTTAGCGGTTTTGTTTTACGGATTTTCCACTCAAGGTGGCTGCGACAAAA
TTGTGCTACACCAGCAGCTCCGTCGTGCCCCGTGAAGCAATTGTCCCTTG
CGGTGTTGCAAGTCAATCAGAGTATCGCAACACGTAGAACGGTAGCATGG
CGCGGTACGTTACCACCGCTTGATCGTGGCAAATCGGGGAATTGAGAAAT
TAGGAACGTGCGCAGAGCTCAAGGGAGGTTAGTTGGGTTTGCCAACCCCT
ACGTTTGGACTCGAATATTCTCCCTAGCCGCTATTATTACGACGCAGTAC
TTGGCGATGAGTGTACACTATTCCTGGTATCAAATGCGGCAAATGGAAAT
ACAGTATGCGTCAATTCGGCGTTTTTTTATTGATCTGGCCTCCCTTGGCT
ATGTCTGGCCATACAGAAGGGAGTTGCCATGTGATAGGGGGGTGTCTTTT
GGAGCATGACACCGCATGCATCATCACAACACTTACTCGTATTAATCAAA
ATGCGACTGAGGATAATATTTAGGGTAAATTGAGCGCTTTTTCCCTTGTA
ATGTTTATCGATAGCGTTTACCATATGCAAGAGATGCTTGAAATTGGCGG
AGCTCATCTACGTTGATATGTTGGAGAAGCCAATATGTCAATACGTTGGC
GCCAATGGTATTGGTGCGAGCGAAGTGAGCGGGCAAACACAGCGAGCAAT
CGAGGGCTTTAGCGCGAGAAAAAATACCCCCGGACGAGCAAGCTCGGTTT
TCCCGAGGACGGGTAGTCAATGTCTAACAACTACGGTATGCAAAGCATGA
GTACGCCCTCCCCCTGGCTGTCGAAGCGCAAATGTAGTCTGAGATAGCCT
CAATGAAGATGCGACAACAAACAACAAACAACGTGGGCCCGATTTCTACA
CTGCTGCACACACCAAAAAGCTGATTTATGGCAATAAGTGGTAAACAATT
CACTGGATAATGACCGTATAGCATGCGAGGAAATACAGCTAATGCACTGG
TGTCACGCGTTTCCAATACTAATTCTTTAGAACATTATTAATGAGCATAT
TAGGATGGAATCAGTTCACAGCACTACTATTTCCATGTCTGCTGGCCGCC
TTCAACCACTATGTCTGGCCGTACAGGAAGGAGAAGTTCTAGGATAGGAG
TGTACGTTTTGGACCATAGCAAGACACACTGTTGAGAGTGGCTAAGCATG
CACCTAAACATCTTGGCCACGTTGTTTAACTCTGCTGTTTTATCATTGTG
TTACTCTGGTGTATAGCGTGGAGCAGCAGCCCTCTGCTTGCTCCCGCGAA
CGATCGCTTTCAACCCCCAAAGAGGATAGGTAGGTAGCGTAGGATTGGTA
GGTACCCTTGTAGAAGAGAAGGCATAGGTGACGTAACCACTATCGTACGA
CGAGACTATGGTAGGTAACACTGCAAAAGCTAAAGCAAGTAACGAGCTTC
AAGTCGTGTTTTCATTTTTAAAAGTGCTCTTCTCTTCGCTAGTTCGAACC
AAAATGCTATGAAACCAGCATGCGTAAATGAAAGTCTAGACTATCTAGCC
GGCACACGTAGCGTTGTCGATCCTGTTCTACGTTTTGCCAGTAAAAGTGA
GGACTATTCCGCCCGCTTCGATTTCCAAGACAGATCACGGTAGCCTGGAC
AGACCCCACATATATACTGTGCGTAATTAACGCGGCAGGTGAAAAGAACA
AAAAATATATACCCGCTGACCAGTGACGCGGTAGGCTCAAACCACCGACT
GTTACTAGTTAAAACATACCTACGCTCATGGTATTGAATCCCCACTCAGC
TCTCAACAAATGCTAAATCAACGCAAGAGCGAAATAACAGCACTCCCGAT
CCTCGAACGCTACGCTCTGATCCCGCTTCCCTACCTCGCCCAACACCCAC
CCTGTGTTTATCCGTGTTTACAGCCGTCACGGCAGCCGCAGCCGCCACCG
CAGGAGCCCCAGCAGCAACAGCAACAAGTTTTCGACTTCGCAGCTTTTTC
CTACAACCCCAATGCGAACCCCTCCCCCCCCATATCCGACAGCTGCACCA
CCCCCAACATCACCGCCGCCACCACCACCAACGACAGCAACAACACAGCC
AAAACAGTGGGTAGTAGTTGTTCGCCCCTTTTCCCGTCTTCTCAGCAGCT
GCACCCGTGGGATGGCGGCTGCGGCGACGATCAGGTGGTCAATGGGCGTG
AGGAGGGCGATGATCAGCAGCAGCGCTGTCGCAGGAAGTGGCGGGTGCCG
ATGACCGGAACGATGGGGGAGCTAAATAGTGCAGGAGCCGGCACCAGGAT
GAAAAGTGTAGAATCTGCCCAAGGCTTGGGTCGGCAAGCGGTAAGATGGC
GAGGTCTCTTGATGTCGGCCTAAGGGTTGGGATAGGGTTAGGGTTAGCGT
TGTATTTGTGTTGTTTTAATAATGGCATGTATGACTTCCTTAACGTTGAT
AGGCTCGTCGTAACATGGAGGGGGTATCCAACATAGGGAGGGCACCCCCG
TTTTGAGTACAGGGAACCCTCTCTGCTGGATTGTAAAAAATTGCTGAAGT
GCTCCACGAAAGCAAGCAAGCAGCTTTACGTATATGTACGAATCAGGAAA
ATTAAGCGCAAAGCGACTAAAACGTGTCTGGGTAGTCACGCCTTAGCAGA
ATAGAGTCATGCTCTAAAACTGCCCCCCCCTCCTATCGTAGGATGACTCC
GTAAAGATGGTTCCGTGGTATTTCATAGCTCTGATTGTTGCACTCGGATG
GCGGGCACTGCTCTATTGCTGTTGTCTAGTGCATCATGGTGGATTTTCAA
GTATCCGCAAGCATCCTCCAGCAGTACACCCCACGATCACGATCCATCGT
AGTACGATTGGCGACGGTGCTGTACCTCCATCAGACTTGAACCGAACAGT
GCTACTTGTTTATCTGACAAAACGGTCAGCAGATCGAACCAAAGACGATG
GTGGCAGCTCCCTCTACTTCTACCAACAATTCTCTAATCAACACTGACAC
GCGCTCATGGGACGATCTTCTGAGAGGACGCTCGACTTTTCTACCCCACC
CACCTCATCGCGGAGTCGCTCCTCCACCCATGGTGGACCCCGTAGGCAAC
GTCAGCGGCCAGAGGGTACCGTGGCAGGTCCAGCGGCGCCCGGTCGACAG
GACGATAGAAGACTACGCCGACGCCGACCAAGGCAGTTTTATCGAGGGGA
AGGGATCCATGTGGACGACCGGCGATAGCTACTGGGGTAGCAGCGGTGGC
GGCGATGGCCAGGTAAGAAGGGTTCAATCTCTAGGTCCTCCCTCCTTGGT
CATAATCCACTCATTGGTATTTAATCATGGTTGAAAGCTTTATATAATAG
GTTATTCATATATACGACAGATACATCCTGCAGTAGAGATCATAAAAGAG
TGCCAAGCTATTTATTAGTAGTAGGGGTTGAGGATTGTTTTTTACTTTTT
CGGATTGGATGCTGGATCAGCACGAATGGGTGAATGAAATGGTGTCGTTT
TGGGGCGGTTCAAGAACAAAAGACGTCGTGCGCAGAAAAGAACGGCGCCG
TCTTTTTCGCCAACGTGAGCGGCAAAAAGGGCCAGTAGGCCGTTGGTGGG
GACCAGCTACTACCCAAACGACGCGCCTAACTCGTCAGAATCTGATTTTT
CAATACAGCTTCGGTCCGCTCGTAAGAGACTGAAAGGCAGGTGTACCCAG
GCTGTGTTCGTCTCTTATGTTGACGAAGCGAAGCAAGAAAGCACTCATTT
TCAAGGCAGTTTCATTTTTTGCAGCACAACCCTAGGCGTAGGGTCAATAC
CAACGAGAGCGTTTCCTCGGGGGGAAGGGTTTCTCTCTCTTCCTCCATAG
TAGCTTTGCCTTTTTCCTGCAACATGCTGAGATGATGTCAGAATAATCAG
GAAAAACTGAATTAGGGCGAAGTTCAGGTACATTGTGGCAGGTGGGTTGA
CTTGTGAACACGGCTTGGTGCCGTTACCCCCTCCCCCCCTCCACCTCCCT
CTCCCCGTCTCCCCCCCCCTCTCCATTCTCAAACTCCTGATGCTTACAAG
ACTGGTTATTCTCTAGTCCAAGGCCAGATACCCCAAGGGCAAGTTTTTCA
GCCGCCACATACGCCCAGCACCTCGTCTTGGCCCCAAGATGCCCAGTACA
ACTGCAGCTTCTTCGCAGTTCAATCAAAGAATGACGATAGACTCCGTGAC
AGTGAGAATTCGGGTGGCAGTGGGGGCGGGAGCGAGATAGACACGAGGGC
GGTGGTGGTTCCGACTCCTAGGAGGTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1577:839..5316- >mRNA_H-paniculata_contig1577.3345.1 ID=mRNA_H-paniculata_contig1577.3345.1|Name=mRNA_H-paniculata_contig1577.3345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2160bp|location=Sequence derived from alignment at H-paniculata_contig1577:839..5316- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGAAAACGTCGGCCGATCGGGTGGAGCGGGAATCCAGGGACCGAGGGC
AGCCGACGATGGCGCAGTGGTGGACCTTGCTAGCTATATGTCCGCCTGCC
CTGAGAGCGAAAACGTCGGCCGATCGGGTGGAGCGGGAATCCAGGGACCG
AGGGCAGCCGACGATGGCGCAGTGGTGGACCTTGCTAGCTATATGTCCGC
CTGCCCTGAGCCGTCACGGCAGCCGCAGCCGCCACCGCAGGAGCCCCAGC
AGCAACAGCAACAAGTTTTCGACTTCGCAGCTTTTTCCTACAACCCCAAT
GCGAACCCCTCCCCCCCCATATCCGACAGCTGCACCACCCCCAACATCAC
CGCCGCCACCACCACCAACGACAGCAACAACACAGCCAAAACAGTGGGTA
GTAGTTGTTCGCCCCTTTTCCCGTCTTCTCAGCAGCTGCACCCGTGGGAT
GGCGGCTGCGGCGACGATCAGGTGGTCAATGGGCGTGAGGAGGGCGATGA
TCAGCAGCAGCGCTGTCGCAGGAAGTGGCGGGTGCCGATGACCGGAACGA
TGGGGGAGCTAAATAGTGCAGGAGCCGGCACCAGGATGAAAAGTGTAGAA
TCTGCCCAAGGCTTGGGTCGGCAAGCGCCGTCACGGCAGCCGCAGCCGCC
ACCGCAGGAGCCCCAGCAGCAACAGCAACAAGTTTTCGACTTCGCAGCTT
TTTCCTACAACCCCAATGCGAACCCCTCCCCCCCCATATCCGACAGCTGC
ACCACCCCCAACATCACCGCCGCCACCACCACCAACGACAGCAACAACAC
AGCCAAAACAGTGGGTAGTAGTTGTTCGCCCCTTTTCCCGTCTTCTCAGC
AGCTGCACCCGTGGGATGGCGGCTGCGGCGACGATCAGGTGGTCAATGGG
CGTGAGGAGGGCGATGATCAGCAGCAGCGCTGTCGCAGGAAGTGGCGGGT
GCCGATGACCGGAACGATGGGGGAGCTAAATAGTGCAGGAGCCGGCACCA
GGATGAAAAGTGTAGAATCTGCCCAAGGCTTGGGTCGGCAAGCGATCGAA
CCAAAGACGATGGTGGCAGCTCCCTCTACTTCTACCAACAATTCTCTAAT
CAACACTGACACGCGCTCATGGGACGATCTTCTGAGAGGACGCTCGACTT
TTCTACCCCACCCACCTCATCGCGGAGTCGCTCCTCCACCCATGGTGGAC
CCCGTAGGCAACGTCAGCGGCCAGAGGGTACCGTGGCAGGTCCAGCGGCG
CCCGGTCGACAGGACGATAGAAGACTACGCCGACGCCGACCAAGGCAGTT
TTATCGAGGGGAAGGGATCCATGTGGACGACCGGCGATAGCTACTGGGGT
AGCAGCGGTGGCGGCGATGGCCAGATCGAACCAAAGACGATGGTGGCAGC
TCCCTCTACTTCTACCAACAATTCTCTAATCAACACTGACACGCGCTCAT
GGGACGATCTTCTGAGAGGACGCTCGACTTTTCTACCCCACCCACCTCAT
CGCGGAGTCGCTCCTCCACCCATGGTGGACCCCGTAGGCAACGTCAGCGG
CCAGAGGGTACCGTGGCAGGTCCAGCGGCGCCCGGTCGACAGGACGATAG
AAGACTACGCCGACGCCGACCAAGGCAGTTTTATCGAGGGGAAGGGATCC
ATGTGGACGACCGGCGATAGCTACTGGGGTAGCAGCGGTGGCGGCGATGG
CCAGACTGGTTATTCTCTAGTCCAAGGCCAGATACCCCAAGGGCAAGTTT
TTCAGCCGCCACATACGCCCAGCACCTCGTCTTGGCCCCAAGATGCCCAG
TACAACTGCAGCTTCTTCGCAGTTCAATCAAAGAATGACGATAGACTCCG
TGACAGTGAGAATTCGGGTGGCAGTGGGGGCGGGAGCGAGATAGACACGA
GGGCGGTGGTGGTTCCGACTCCTAGGAGGTGAACTGGTTATTCTCTAGTC
CAAGGCCAGATACCCCAAGGGCAAGTTTTTCAGCCGCCACATACGCCCAG
CACCTCGTCTTGGCCCCAAGATGCCCAGTACAACTGCAGCTTCTTCGCAG
TTCAATCAAAGAATGACGATAGACTCCGTGACAGTGAGAATTCGGGTGGC
AGTGGGGGCGGGAGCGAGATAGACACGAGGGCGGTGGTGGTTCCGACTCC
TAGGAGGTGA back to top
|