prot_H-paniculata_contig15762.3340.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15762.3340.1
Unique Nameprot_H-paniculata_contig15762.3340.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
BLAST of mRNA_H-paniculata_contig15762.3340.1 vs. uniprot
Match: A0A6H5L2H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H8_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 3.930e-67
Identity = 108/198 (54.55%), Postives = 137/198 (69.19%), Query Frame = 0
Query:    1 PVPRGKEGNRWCQTPVKASLSSSLTCVHHQHNR-IGNGRPTVDQKRFMLLAGKSSKEEFYDRK-GDLCWLRVVSHLRSLASPLEDEQRKLIITAGERAFALADVKITLHGFRQCTLFWLAACRLTRRGYPLTMVAHPSKAKFRDFLNGLRNDKSIFPPPKPASSPLVCIRDLNA-------RGACYYSNGYADVCRMF 189
            PV RGKEGNRWCQTPV+ SL S + C+HH H R  G   P+ +Q R+M+LA     +EF+DR+ GD+CW RVVS+LR+  SP E  QR+ ++TAG+RA A+AD +I LHGF QC  FWLAACRLTRRGY   MVAH SK  F++FL+ LR  K+ +PPP PASSP VC+ D  +       +   YY++GY  VC MF
Sbjct:  193 PVSRGKEGNRWCQTPVRGSLESRMACMHHSHRRRAGGAGPSKEQLRYMMLA-----DEFFDRQSGDICWQRVVSYLRARKSPRELAQRRQVLTAGDRALAVADTQIVLHGFVQCLFFWLAACRLTRRGYEFKMVAHASKGDFKEFLSRLRR-KAAWPPPSPASSPFVCMDDKRSGKRQRQMQHPSYYASGYDQVCGMF 384          
BLAST of mRNA_H-paniculata_contig15762.3340.1 vs. uniprot
Match: D7G151_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G151_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 4.670e-66
Identity = 106/191 (55.50%), Postives = 134/191 (70.16%), Query Frame = 0
Query:    1 PVPRGKEGNRWCQTPVKASLSSSLTCVHHQHNRIGNGR-PTVDQKRFMLLAGKSSKEEFYDRK-GDLCWLRVVSHLRSLASPLEDEQRKLIITAGERAFALADVKITLHGFRQCTLFWLAACRLTRRGYPLTMVAHPSKAKFRDFLNGLRNDKSIFPPPKPASSPLVCIRDLNA-------RGACYYSNGY 182
            PVPRGKEGNRWCQTPV+ SL S + C+HH H R   G  P+ +Q R+M+LA     ++FYDR+ GD+CW RVVS+LR+   P E  QR+ ++TAG RA A+AD KI LHGF QC  FWLAACRLTRRGY  TMVAH SK+ F++FL+ LR  K+ +PPP PASSP VC+ D  +       +   YY++GY
Sbjct:  114 PVPRGKEGNRWCQTPVRGSLESRMACMHHSHRRRAGGTGPSKEQLRYMMLA-----DDFYDRQSGDICWQRVVSYLRARKCPRELAQRRQVLTAGGRAVAVADTKIVLHGFVQCLFFWLAACRLTRRGYEFTMVAHASKSDFKEFLSRLRR-KAAWPPPSPASSPFVCMDDKRSGKRQRQMQHPSYYASGY 298          
BLAST of mRNA_H-paniculata_contig15762.3340.1 vs. uniprot
Match: A0A836CBN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.760e-21
Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   40 TVDQKRFMLLAGKSSKEEFYDRKGDLCWLRVVSHLRSLASPLEDEQRKLIITAGER----AFALADVKITLHGFRQCTLFWLAACRLTRRGYPLTMVAHPSKAKFRDFLNGLRNDKSIFPPPKPASSPLVCI--RDLNARGACYYSNGYADVCRM 188
            T DQ+  +LL        FY R G+LCW  V+++L+       + +  +++ +G      AFA  DVKI LHGF+QC LFW AACRL  RGY    V H S+A+FR  L   ++D + F   +  +SPL  I  R  N R   YY  G+ ++C +
Sbjct:  118 TRDQRLHLLL-----DPAFYRRNGELCWETVLAYLQEHTPDWRNRKEAVVVGSGGEGEAAAFATRDVKIVLHGFQQCPLFWFAACRLAARGYAFQHVCHASRAQFRAALRR-QSDVAGFS-MQHTTSPLALISSRRENVR---YYLGGFDNICNL 262          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15762.3340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2H8_9PHAE3.930e-6754.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G151_ECTSI4.670e-6655.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBN2_9STRA9.760e-2138.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15762contigH-paniculata_contig15762:144..4042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15762.3340.1mRNA_H-paniculata_contig15762.3340.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15762 144..4042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15762.3340.1 ID=prot_H-paniculata_contig15762.3340.1|Name=mRNA_H-paniculata_contig15762.3340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
PVPRGKEGNRWCQTPVKASLSSSLTCVHHQHNRIGNGRPTVDQKRFMLLA
GKSSKEEFYDRKGDLCWLRVVSHLRSLASPLEDEQRKLIITAGERAFALA
DVKITLHGFRQCTLFWLAACRLTRRGYPLTMVAHPSKAKFRDFLNGLRND
KSIFPPPKPASSPLVCIRDLNARGACYYSNGYADVCRMF*
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