prot_H-paniculata_contig15757.3338.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15757.3338.1
Unique Nameprot_H-paniculata_contig15757.3338.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: D8LM69_ECTSI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM69_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.140e-32
Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 VSEAEFLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFEWWDHVGDKDRLKSFRDDVIHRVGTCAEK 68
            VS+AEFLD++GLR+LLA AERGEVEFTPWS YIID+FVF WWDHVGDK++L S RD VIHRVG+CA++
Sbjct:  166 VSDAEFLDKDGLRSLLARAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASLRDSVIHRVGSCADE 233          
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: A0A7S2UUE2_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.240e-16
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    6 FLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFEWWDHVGDKDRLKSFRDD--VIHRVGTCAEK 68
            ++  + LR ++  A+RGE++ TPWSRYIID F+F+WW  VGD+  L++  DD  VIHRVG CAE+
Sbjct:  247 YVTADELRDMMDQADRGEIKLTPWSRYIIDEFIFKWWPLVGDRKALEAQADDFSVIHRVGPCAEE 311          
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: A0A3A5V6Z8_9ARCH (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Archaea TaxID=2157 RepID=A0A3A5V6Z8_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 1.700e-8
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 VSEAEFLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFE-WWDHVGDKDRLKSFRDDVIHRVGTCA 66
            VSE +++++E L  +L A   G+ E  PW R I  R + + WWD VGD D+L +  D++IH +G  +
Sbjct:  182 VSEVKWVNQEELEEMLVAEVEGDGEIAPWFRCIASRLMTDQWWDAVGDSDKLSAISDEMIHDMGDVS 248          
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: A0A7S1ETW3_9RHOD (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETW3_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 1.980e-8
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 VSEAEFLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFEWWDHVGDKDRLKSFRDDV--IHRVG 63
            V + ++L+RE L+ LL     G V+ TPW +YI++ FVF+WWD +  K+ L+   D    IHR G
Sbjct:  236 VDDVKYLNREELKELLEQDGNGIVKVTPWFKYIVNAFVFQWWDQLDSKEVLRDAVDTQHQIHRFG 300          
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: D3ZVY0_RAT (Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Rattus TaxID=10114 RepID=D3ZVY0_RAT)

HSP 1 Score: 54.7 bits (130), Expect = 4.360e-7
Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    1 VSEAEFLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFEWWDHVGDKDRLKSFRDDVIHRV 62
            VS   +L RE L  LL    RGEV+ TPW R+++++F++ WW ++ +  R      D I+RV
Sbjct:  213 VSSFSYLTREELEELLERGARGEVQVTPWLRFVVEQFLYAWWPYLDEATRFIEL--DKIYRV 272          
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Match: W7TKI6_9STRA (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKI6_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.550e-6
Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   21 RGEVEFTPWSRYIIDRFVFEWWDHVG-DKDRLKSFRDDV-IHRVG 63
            RG + FTPWSR I++R+++ WW  VG D  +L+  RD   IHR+G
Sbjct:  285 RGHIYFTPWSRAIMERWLYTWWPDVGADMGKLEKHRDTARIHRIG 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15757.3338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LM69_ECTSI2.140e-3276.47Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ec... [more]
A0A7S2UUE2_9STRA2.240e-1652.31Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fi... [more]
A0A3A5V6Z8_9ARCH1.700e-838.81Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Ar... [more]
A0A7S1ETW3_9RHOD1.980e-841.54Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ti... [more]
D3ZVY0_RAT4.360e-738.71Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Ra... [more]
W7TKI6_9STRA4.550e-648.89Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Mo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10coord: 1..62
e-value: 1.2E-9
score: 40.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15757contigH-paniculata_contig15757:578..784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15757.3338.1mRNA_H-paniculata_contig15757.3338.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15757 578..784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15757.3338.1 ID=prot_H-paniculata_contig15757.3338.1|Name=mRNA_H-paniculata_contig15757.3338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
VSEAEFLDREGLRALLAAAERGEVEFTPWSRYIIDRFVFEWWDHVGDKDR
LKSFRDDVIHRVGTCAEK*
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