mRNA_H-paniculata_contig15750.3336.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: D8LQ69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ69_ECTSI) HSP 1 Score: 317 bits (813), Expect = 1.290e-98 Identity = 215/500 (43.00%), Postives = 264/500 (52.80%), Query Frame = 1
Query: 19 ELVGYTLSFLDGRSLTSFEVVAASTRRLLREHPDMFKRLLLGQLANVPQLASLRNKDGKRALIAWEGGDFQPVVAVRASRDAPSPRYLHRVALAADGWHYLYGGHLSMGMSGEVWRFRVEESRCRR--KSLAGGAVLGLQWELVDADGLQDAAEDEGDAAGRPEDVGDNDNDDPMSSNS-GDAEKAEDGNKASSDESDLKRDDDGVDDVLNPAALFNLPPAA---QSAQHG---AWQALAAAAAQGAGGGVQGDAQAA-----------------HAALQAAIWAQH--LGMNLNLGGNVVALDANGNPTR--------PSPRCAASWTCMPGSNKIYLFGGLGQENDFLSDLWCFDAGARSQCRWERLTALRED----------------EGAEQEEDGAAAA-AVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLL----------------AKDGEQPPARGGHSATVVGDTLYIFGGNITQ 1311
++V L+FLDGRSLT FE + +R+ ++++PD++K LLL Q+ NVP++ASL +++GKRAL+AWE GDF P++A+ R AP PRYLHR A AADGW Y++GGHL G+SG+VWRFR+ +S+ RR + LQWE V +D A + G S G A V P A + PAA + HG A Q AA + A G A A HAA+ AA H LG G V DA G P PRCAASWT +PGSNKI+LFGG G +N+FL DLWCF AGAR +CRWE+L +RE E + + G A VP GRWGHTMVEH+G LYMFGGSSPG A+ GLWRLD S PC WSL+ A GE+PPARGGHSATVV DTLYIFGGNITQ
Sbjct: 11 DMVAAALAFLDGRSLTVFEAASKGSRQTVQDNPDLYKTLLLRQVDNVPRMASLPSEEGKRALMAWEEGDFLPILAL-VPRRAPPPRYLHRAAEAADGWTYVHGGHLQSGLSGDVWRFRMSDSKRRRGPDPREDETAVKLQWEQVWGGNDEDWARETGSXXXXXXXXXXXXXXXXXXXXSWGHPSHA----------------------VPPPDAAXXVAPAAPAPDNVNHGPLPAAQMFAAPGQEIALGAAPAAADQAXXXXXXXXXXXXXXXXXHAAMFAA---NHGVLGAGFEDAGGGV--DAAGXXXXXXXXXMACPRPRCAASWTALPGSNKIFLFGGQGSDNNFLGDLWCFHAGARGECRWEQLDQVREPRPSGDGXXXXXXXXXXEHGDNDVGGPGAPWRVPAGRWGHTMVEHRGALYMFGGSSPGTAFAGLWRLDVSVSPCVWSLMTPGRTAVSLEEGGLAEAAGGERPPARGGHSATVVRDTLYIFGGNITQ 482
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A835Z6C5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.540e-15 Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 1
Query: 1066 AAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPST------RPCRWSLLAKD-----------------------GEQPPARGGHSATVVGDTLYIFGGNITQVCDSSL 1329
+ A VP RWGHT V G LY++GGS PG+ + LW + P T RW+LLA G+ PP RGGHSAT++G +Y+FGGN Q C + L
Sbjct: 360 SGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDL 476
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A1W5CVG2_9LECA (Kelch-type beta propeller n=2 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5CVG2_9LECA) HSP 1 Score: 83.2 bits (204), Expect = 3.470e-13 Identity = 55/158 (34.81%), Postives = 74/158 (46.84%), Query Frame = 1
Query: 859 PTRPSPRCAASW--TCMPGSNKIYLFGGLGQENDFLSDLWCFDAGA--RSQCRWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGGNITQVCD 1320
P+ P P+ A + T +KIY+FGG E F +DL FD A + RWE L D G +P R HT++ K LY+FGG++ Q + +W DP W+ L G P R GHSA +V D +YIFGG + D
Sbjct: 229 PSPPGPKPAGRYGHTLNILGSKIYIFGGQ-VEGYFFNDLLAFDLNALQSNMNRWEMLIQNSND-------GGPPEGQLPPARTNHTIISWKEKLYLFGGTNGTQWFNDVWSYDPRVN--GWTQLDCIGYIPATREGHSAALVNDVMYIFGGRTEEGTD 376
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A8H3GUC4_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3GUC4_9AGAM) HSP 1 Score: 81.3 bits (199), Expect = 6.400e-13 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 865 RPSPRCAASWTCMPGSNKIYLFGGLGQENDFLSDLWCFDAGARSQC--RWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGG 1299
RP+P + +++ +FGG + ++L+DLW D +Q +WE++ E + P R G TMV + +LYMFGG + A+ W D +TR W+ L+ G PP R H+ ++VGD +++FGG
Sbjct: 170 RPAPSARIAHAACICADQFLVFGGQSKPGEYLNDLWSLDLKQLTQGNPKWEQIAIAPE-------------SRSPSRRAGQTMVAYSTMLYMFGGCNEANAFNDTWCFDMNTR--TWTKLSCTGPIPPPRFIHAVSLVGDVVFMFGG 301
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: UPI00046235B3 (galactose oxidase n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI00046235B3) HSP 1 Score: 79.3 bits (194), Expect = 7.750e-13 Identity = 48/129 (37.21%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 916 KIYLFGGLGQENDFLSDLWCFDAGAR-SQCRWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGG 1299
++Y+FGG +F +D+W FD S+ WE+L D A P R GH+ V +K L MFGG+ Y +W D TR WS G P R GHSA +VGD +YIFGG
Sbjct: 79 RVYVFGGHAH-GEFFNDIWSFDLSTLISKPAWEQL-------------DPPKGAPRPSRRSGHSCVAYKDQLIMFGGTDGKYHYNDIWAFDTRTR--TWSEFWCGGYIPSPREGHSAALVGDIVYIFGG 191
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A1M2V5C3_TRAPU (Tip elongation aberrant protein 1 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V5C3_TRAPU) HSP 1 Score: 79.7 bits (195), Expect = 2.400e-12 Identity = 47/129 (36.43%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 916 KIYLFGGLGQENDFLSDLWCFDAGAR-SQCRWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGG 1299
++Y+FGG +F +D+W FD S+ WE+L D A P R GH+ V +K L MFGG+ Y +W D TR WS G P R GHSA +VGD +Y+FGG
Sbjct: 301 RVYVFGGHAH-GEFFNDIWSFDLSTLISKPAWEQL-------------DPPKGAPRPSRRSGHSCVAYKDQLIMFGGTDGKYHYNDIWAFDTRTR--TWSEFWCGGYIPSPREGHSAAIVGDIVYVFGG 413
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A6A6VR18_9PLEO (Uncharacterized protein n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6VR18_9PLEO) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-11 Identity = 51/138 (36.96%), Postives = 70/138 (50.72%), Query Frame = 1
Query: 913 NKIYLFGGLGQENDFLSDLWCFDAGA--RSQCRWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGGNITQVCD 1320
+KIY+FGG E F +DL FD + S RWE L +D + A P R H++V + LY+FGG+ + + +W DP + W+ L G P AR GHSAT+V DT+YIFGG + D
Sbjct: 239 SKIYIFGGQ-VEGFFFNDLVAFDLNSLQSSSSRWEVLLPNTKDGSVSSPQHRA-----PPPRTNHSVVTWEDKLYLFGGTDGVRWFNDVWTYDPRSN--SWTELDCIGYIPVAREGHSATLVNDTMYIFGGRTQEGLD 368
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A4E9G212_BRUMA (Kelch motif family protein n=13 Tax=Onchocercidae TaxID=6296 RepID=A0A4E9G212_BRUMA) HSP 1 Score: 75.5 bits (184), Expect = 3.620e-11 Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 910 SNKIYLFGGL--GQENDFLS--DLWCFDAGARSQCRWERLTALREDEGAEQEEDGAAAAAVPDGRWGHTMVEHKGLLYMFGGSSPG-QAYTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGG 1299
+++IY FGG G+ D D+ D G RW +LT ++ +E + + P R+GHT+VE+ G Y++GG + A + ++ DP WS++ +GE PPAR GHSA VV D +++FGG
Sbjct: 22 NDQIYSFGGYCSGELYDGSQPVDVHVLDTG---NYRWRKLTVRTDNSESETAYPSVSQNSWPYQRYGHTVVEYNGKAYLWGGRNDEFGACSKMYCFDPEA--VTWSVVPSEGEAPPARDGHSAVVVDDLMFMFGG 151
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A0B2VBR1_TOXCA (Kelch domain-containing protein 3 n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2VBR1_TOXCA) HSP 1 Score: 75.1 bits (183), Expect = 4.900e-11 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 919 IYLFGGL--GQ--ENDFLSDLWCFDAGARSQCRWERLTALREDEGAEQEEDGAAAAA----VPDGRWGHTMVEHKGLLYMFGGSSPGQAYTGLWRL-DPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGG 1299
IY FGG G+ E + D+ D RW +L E E + G++A P R+GHT+V +KG Y++GG + + + DP T C WSL+ ++G PPAR GHSA VV DT+Y+FGG
Sbjct: 25 IYSFGGYCSGEPYEGNEPIDVHVLDTETY---RWRKLNVHCE----EPMDTGSSATTQPIITPYQRYGHTVVAYKGKAYLWGGRNDEHGASAQMHIFDPET--CSWSLVERNGPCPPARDGHSAVVVDDTMYVFGG 151
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Match: A0A183J9D0_9BILA (F-box domain-containing protein n=2 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183J9D0_9BILA) HSP 1 Score: 73.2 bits (178), Expect = 8.230e-11 Identity = 52/156 (33.33%), Postives = 67/156 (42.95%), Query Frame = 1
Query: 877 RCAASWTCMPGSNKIYLFGGLGQENDFLSDLWCFDAGARSQCRWERLTALREDEGAEQEEDGAAAAAVPDGRW-----GHTMVEHKGLLYMFGG---SSPGQA------YTGLWRLDPSTRPCRWSLLAKDGEQPPARGGHSATVVGDTLYIFGGN 1302
RC+ S C S +Y+FGG +DLW D DG + +P GR+ TMVEH+G L +FGG SSP Y L DP +W+ L DG PP GHSA+VVGD + +FGG+
Sbjct: 68 RCSHS-ACYHPSGYMYVFGGCAAAYTTFNDLWKLDLA-----------------------DGTWSRLLPGGRYPTPKASATMVEHRGQLVLFGGWSKSSPNPIHQISMFYNELHVFDPVLN--QWTELCDDGSSPPGLAGHSASVVGDRMIVFGGS 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15750.3336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15750.3336.1 >prot_H-paniculata_contig15750.3336.1 ID=prot_H-paniculata_contig15750.3336.1|Name=mRNA_H-paniculata_contig15750.3336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=444bp MQLLPRELVGYTLSFLDGRSLTSFEVVAASTRRLLREHPDMFKRLLLGQLback to top mRNA from alignment at H-paniculata_contig15750:496..4473- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15750.3336.1 ID=mRNA_H-paniculata_contig15750.3336.1|Name=mRNA_H-paniculata_contig15750.3336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3978bp|location=Sequence derived from alignment at H-paniculata_contig15750:496..4473- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15750:496..4473- >mRNA_H-paniculata_contig15750.3336.1 ID=mRNA_H-paniculata_contig15750.3336.1|Name=mRNA_H-paniculata_contig15750.3336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2664bp|location=Sequence derived from alignment at H-paniculata_contig15750:496..4473- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |