mRNA_H-paniculata_contig15741.3331.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: D8LNE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE3_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 2.030e-130 Identity = 232/370 (62.70%), Postives = 260/370 (70.27%), Query Frame = 1
Query: 16 GPEGAIVANDEPLAPRRTAVRVMHDICTWLLDLGLPVVARRANTVAEESERLAVKKAQERGLPTRTPTSLRESSRRLRCRLILVE---------------------------------------------GK--------SVNETFTH-----DAEMLALEAVELLPDDPRPWQALAEVCDAQGAIKASEAADAWAAVLDRMEENWKVSGKKGK---ICIPPLQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSLAADNTE--TRGNSHTRR 936
G GAIV++DEP PRRTAVRVMHD C WLL+LGLP +ARRA VAEESERLAVKKA+ERGL RTP++LRESSRRL+C LIL + GK S +E DAE LA EAVEL P DPRPWQALAE CDAQG IKA+EAADAWAAVLDRME W+ S G+ PPL+VYMRLGSLYN LGR ++AKACFLRACRAWRAPGPW GCG AC+RLEQW+EAE+A+QHASR+DCNS LVWG+LALLLLS+GEDRL+EAD+ALSQAL LGLAD+SLLRE+GNCYVAAGRL+AAE ALR SLAAD GN HTRR
Sbjct: 994 GAIGAIVSDDEPGTPRRTAVRVMHDACAWLLELGLPGMARRAFIVAEESERLAVKKAKERGLSVRTPSALRESSRRLKCYLILADAATAAIAADPDNSNTIASAALPGKGGSRPNEDAAIQAAEPAPAALGKAFGDQKQGSASEVMAMVYCAVDAERLAQEAVELSPGDPRPWQALAEACDAQGLIKATEAADAWAAVLDRMETAWRTSSASGEEPTSPTPPLRVYMRLGSLYNTLGRVEEAKACFLRACRAWRAPGPWLGCGAACMRLEQWQEAEDAMQHASRLDCNSSLVWGHLALLLLSMGEDRLQEADRALSQALCLGLADSSLLREIGNCYVAAGRLDAAEEALRKSLAADVNSHGNSGNPHTRR 1363
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A6H5KT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT48_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 3.000e-126 Identity = 231/389 (59.38%), Postives = 255/389 (65.55%), Query Frame = 1
Query: 16 GPEGAIVANDEPLAPRRTAVRVMHDICTWLLDLGLPVVARRANTVAEESERLAVKKAQERGLPTRTPTSLRESSRRLRCRLILVE-------------------------GKSVNETFTH-------------------------------DAEMLALEAVELLPDDPRPWQALAEVCDAQGAIKASEAADAWAAVLDRMEENWKVSGKKGKICIPP---LQVYMRLGSLYNALGRTDDAK---------------------ACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSLAADNTE--TRGNSHTRR 936
G GAIV++DEP PRRTAVRVMHD C WLL+LGLP +ARRA VAEESERLAVKKA+ERGL RTPT+LRES RRL+C LIL + G NE DAE LA EAVEL P DPRPWQALAE CDAQG IKA+EAADAWAAVLDR E W+ S G+ PP L+VYMRLGSLYN LGR ++AK ACFLRACRAWRAPGPW GCG ACLRLEQW+EAE+ALQHASR+DCNSPLVWG+LALLLLS+GE RL+EAD+ALSQAL LGLAD+SLLRE+GNCYVA GRL+AAE ALR SLAAD GN HTRR
Sbjct: 941 GAIGAIVSDDEPRTPRRTAVRVMHDACAWLLELGLPGMARRAFIVAEESERLAVKKAKERGLSIRTPTALRESCRRLKCYLILADEATAAVAADRDNSNIIASTVVSGKAGSRTNEAAQAAAPAPAAAGKASGDEKQTSASDGMAMVPGAVDAERLAQEAVELSPGDPRPWQALAEACDAQGLIKATEAADAWAAVLDRTETAWRTSPASGEEATPPTPALRVYMRLGSLYNTLGRIEEAKVGKGAYNSVGPVNFEYAAVVKACFLRACRAWRAPGPWLGCGAACLRLEQWQEAEDALQHASRLDCNSPLVWGHLALLLLSMGEGRLQEADRALSQALCLGLADSSLLREIGNCYVAVGRLDAAEEALRKSLAADVNSHGNNGNPHTRR 1329
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A7S2GGG8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GGG8_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.970e-46 Identity = 121/304 (39.80%), Postives = 166/304 (54.61%), Query Frame = 1
Query: 58 PRRTAVRVMHDICTWLLDLGLPVVARRANTVAEESERLAVKKAQERGLPTRTPTSLRESSRRLRCRLILVEGKSVNETFTHDAEMLALEAVELLPDDPRPWQALAEVCDAQGAIKASEAADAWAAVLDRME--------ENWKVS--GKKGKICIPPLQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGED-RLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSLAADNTETRGNSHTRR 936
P+RT+V V + LL+ L V+R A +AE++E+ A KA ER L T P+ L + RRL+ ++ L+E A LA A + P D W LA+ G ++AS A A A R E ++ K S G K PPL++Y+RLG LY L R +A FL+ C W+ W G G++ LRL ++EEAE +L A+ ++ P+VWGY+ LL L G+D R+ EA AL++A RL L DASLLRE+GN Y+A LE AE LR SLA D + +HTRR
Sbjct: 164 PKRTSVAVALEAAALLLEANLVAVSRIALEIAEKAEKAAKTKADERKLQTGMPSQLMQWQRRLQAQMALLERDDER------AVSLASVATSMDPSDGEAWLVLADCEMCGGHVEASTVACAKALTCLRKEADTGSATTDSLKNSDIGPSDKSDRPPLRLYVRLGFLYIQLSRYQEASDVFLQGCSVWQTCSVWLGAGISLLRLNKFEEAEVSLMEANMVNGAHPVVWGYICLLCLCCGDDSRISEAHAALTEAKRLKLQDASLLREIGNAYMAVDLLETAEDVLRRSLACDPS-----AHTRR 456
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A835YIA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA9_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.810e-32 Identity = 106/278 (38.13%), Postives = 132/278 (47.48%), Query Frame = 1
Query: 58 PRRTAVRVMHDICTWLLDLGLPVVARRANTVAEESERLAVKKAQERGLPTRTPTSLRESSRRLRCRLILVEGKSVNETFTHDAEMLALEAVELLPDDPRPWQALAEVCDAQGAIKASEAADAWAAVLDRMEENWKVSGKKGKICIPPLQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSL 891
PRRTAV ++ +C +LL GL A KA ERGLP T+ R + RL L + E L A EL P W ALA A A E A+A AA L + ++G PL + RLG+L ALGR ++KA +L R W P W G GVA + LEQWEEAE ALQ A+R+D P VWG LALLLL+ G+ R E A+LLR+LGN +V+ RL AE LR +L
Sbjct: 807 PRRTAVALLLGLCEYLLQRGLRRGAAAXXXXXXXXXXXXXXKAAERGLPPAAGTAQRATLLRLDSALRAAAAANDVXXXXXXVESAQL-AAELEPRSAAAWGALAAALRA--ARYPVEEAEALAAALACCSS----AQERG-----PLAQHARLGALNLALGRPAESKAAWLGGAREWHVPSVWLGAGVAAMELEQWEEAEAALQQANRLDNADPAVWGTLALLLLAQGDARAAEXXXXXXXXXXXXXXXAALLRKLGNAFVSVDRLARAEDMLRRAL 1072
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A485LH67_9STRA (Aste57867_20828 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH67_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.510e-25 Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 499 LQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSL 891
L +Y++LG+LY + AK+ FLRAC W G GV C+R + W+ AE AL A+ +D +P VWGYL+L+ LS R +EA+QAL QALR L++A+LLREL N +VA RLE AE LR SL
Sbjct: 909 LPLYLQLGALYMHHQQWGPAKSIFLRACHETSVASSWLGVGVVCVRQDDWDGAEMALAEANILDHTNPDVWGYLSLVCLSATPARQKEAEQALEQALRYDLSNATLLRELSNGFVALDRLEVAESLLRRSL 1039
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A6G0WAD7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD7_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.710e-25 Identity = 68/140 (48.57%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 499 LQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSL-AADNTETR 915
L +Y+ LG+LY + AKA FLRAC A W G GV C+R E WE AE AL A+ +D + VWGYL+L+ L++ R ++A+QAL QALR L +A+LLREL N +VA +LE AE LR SL AD++ TR
Sbjct: 832 LPLYLHLGALYMQHQQWGAAKAIFLRACHETSAASAWLGVGVVCIRQEDWEGAEMALAEANVLDRTNADVWGYLSLVCLNVTPVRPKQAEQALEQALRYDLTNATLLRELSNGFVALDKLEMAESLLRRSLLTADSSLTR 971
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A7S2XZC4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC4_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.180e-25 Identity = 62/110 (56.36%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 607 WFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSLAADNTETRGNSHTRR 936
W G GVACLRL Q E+AEEALQ A+ +D + +WGYL+LL L GEDRLE A++ L QALR L D LLRELG Y+A RLE AE R SLA + GN TRR
Sbjct: 1 WLGAGVACLRLNQLEDAEEALQEANLLDHRNATIWGYLSLLSLMHGEDRLEHANKTLEQALRFELDDPVLLRELGVSYMAIDRLEVAESLFRQSLAQEG----GNPRTRR 106
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A1V9ZZC2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZC2_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.150e-25 Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 499 LQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSL 891
L +++ LG+LY + +AKA FL +C W G GV C+R E WE AE AL A+ +D + VWGYL L L R E+ADQAL QALR LA+++LLRE+GN YVA +LE AEG LR SL
Sbjct: 851 LPLHLHLGALYMHHQQWSEAKAIFLNSCEEASNASSWLGVGVVCIRQEDWEGAEMALAEANILDNTNAEVWGYLTLACLHSFPPRPEQADQALEQALRYELANSTLLREIGNGYVALEKLETAEGLLRRSL 981
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A024TFN1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFN1_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.400e-23 Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 499 LQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSL 891
L ++++LG+LY + AKA FLRAC W G GV +R + WE AE AL A+ +D + VWGYL L+ L+ RL+EA+QAL QALR GL + +LLREL N +VA +LE AE LR SL
Sbjct: 876 LPLFLQLGALYMHHQQWGPAKAIFLRACHETTVASAWLGVGVVSVRQDDWEGAEMALAEANILDRTNADVWGYLTLVCLNATPPRLKEAEQALEQALRYGLENTTLLRELSNGFVAQDKLEVAESLLRRSL 1006
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Match: A0A812Z0H8_SYMMI (Cfap70 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z0H8_SYMMI) HSP 1 Score: 106 bits (264), Expect = 1.830e-23 Identity = 58/149 (38.93%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 496 PLQVYMRLGSLYNALGRTDDAKACFLRACRAWRAPGPWFGCGVACLRLEQWEEAEEALQHASRMDCNSPLVWGYLALLLLSLGEDRLEEADQALSQALRLGLADASLLRELGNCYVAAGRLEAAEGALRMSLAADNTE--TRGNSHTRR 936
PL Y+ G + GR +DA L CR + + + G+ CLR+++ +AE+ALQ A+ +D +P VW YLA+L L G+ R+EEA+++ QALRLGL ++++LRE+ +++ +L AE +R S+A+D + + NSHTRR
Sbjct: 57 PLADYVEAGKALLSTGRFEDALDVMLLGCRVYPSSTLFNLVGICCLRVDRMVDAEDALQEANLIDNRNPEVWAYLAILCLHTGDHRMEEAERSCEQALRLGLNNSAILREIAMAFISVDKLRTAEELVRRSMASDLADGAPKPNSHTRR 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15741.3331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15741.3331.1 >prot_H-paniculata_contig15741.3331.1 ID=prot_H-paniculata_contig15741.3331.1|Name=mRNA_H-paniculata_contig15741.3331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp MAADSGPEGAIVANDEPLAPRRTAVRVMHDICTWLLDLGLPVVARRANTVback to top mRNA from alignment at H-paniculata_contig15741:177..3276+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15741.3331.1 ID=mRNA_H-paniculata_contig15741.3331.1|Name=mRNA_H-paniculata_contig15741.3331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3100bp|location=Sequence derived from alignment at H-paniculata_contig15741:177..3276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15741:177..3276+ >mRNA_H-paniculata_contig15741.3331.1 ID=mRNA_H-paniculata_contig15741.3331.1|Name=mRNA_H-paniculata_contig15741.3331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1872bp|location=Sequence derived from alignment at H-paniculata_contig15741:177..3276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |