mRNA_H-paniculata_contig15738.3327.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: D7FKP6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 7.060e-20 Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 7 GEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
G+MGD++ VDLG R V + GRWHTCV++DN+ VKCFGV+T +DLGAGQLGLED +RG ++GD L
Sbjct: 341 GQMGDDMVGVDLGEGRHPVAVAAGRWHTCVLMDNDEVKCFGVNTVEDLGAGQLGLEDQISRGGSLDTIGDNL 412
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 8.520e-19 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 10 EMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
+MGD++ VDLG R V + GRWHTCV++DN+ VKCFG +T++DLG GQLGLED NRG ++GD L
Sbjct: 244 QMGDDMVAVDLGEGRHPVAVAAGRWHTCVLMDNDEVKCFGANTAEDLGGGQLGLEDTINRGGSLDTIGDNL 314
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A150FY78_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FY78_GONPE) HSP 1 Score: 80.5 bits (197), Expect = 8.550e-18 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 4 PGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDALEY 228
PGEMGDNL VDLGT RT + G +HTC VLDN KC+G++ G G+LG D +RGD G MGD+L Y
Sbjct: 8 PGEMGDNLFYVDLGTGRTVAALAAGAYHTCAVLDNGKAKCWGIN-----GNGRLGYGDTADRGDAPGEMGDSLPY 77
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A383F410_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383F410_9ZZZZ) HSP 1 Score: 82.8 bits (203), Expect = 1.040e-17 Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 7 GEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDALE 225
GEMGD+LA VDLG+ RTA I G HTC +LDN +VKC+G + S GQLGL DD NRGD A MGD L+
Sbjct: 22 GEMGDSLAIVDLGSGRTAKAIAAGNQHTCAILDNSSVKCWGANAS-----GQLGLGDDDNRGDGANEMGDDLD 89
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: UPI001056704E (hypothetical protein n=1 Tax=Legionella yabuuchiae TaxID=376727 RepID=UPI001056704E) HSP 1 Score: 84.0 bits (206), Expect = 3.460e-17 Identity = 45/74 (60.81%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 1 EPGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
EPGEMGDNL VDLGT RTA +T G C +LDN+ VKC+G +TS GQLGL D NRGD AG MGD L
Sbjct: 332 EPGEMGDNLPAVDLGTGRTAKQLTAGGGFNCTLLDNDTVKCWGRNTS-----GQLGLGDTTNRGDGAGEMGDNL 400
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A7S4Q2C5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q2C5_9DINO) HSP 1 Score: 82.8 bits (203), Expect = 4.060e-17 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 1 EPGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDALEY 228
+PGEMGDNL VDLGT T + + G H C +LD+ VKC+G TS G+LG EDD NRGD G MGDAL Y
Sbjct: 28 QPGEMGDNLPSVDLGTGCTVLDLGAGEAHNCALLDSNRVKCWGRGTS-----GRLGYEDDRNRGDAPGEMGDALPY 98
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A7C1YKS1_9ACTN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YKS1_9ACTN) HSP 1 Score: 82.8 bits (203), Expect = 8.980e-17 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 4 PGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
PGEMGDNL +DLGT RTAV I G HTC +LD+ ++KC+G +TS QLGL D NRGD+ G MGD L
Sbjct: 204 PGEMGDNLPSIDLGTGRTAVAIAAGSHHTCAILDDGSLKCWGANTS-----AQLGLGDAQNRGDQPGEMGDNL 271
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 1.260e-16 Identity = 42/73 (57.53%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 4 PGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
PGEMGD L V+LGT RTA I+ G WHTC +LDN +VKC+G + AGQLGL D NRGD MGD L
Sbjct: 1851 PGEMGDTLPAVELGTGRTATAISAGGWHTCALLDNGSVKCWGYND-----AGQLGLGDTSNRGDGPSEMGDTL 1918
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A382ZHR9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382ZHR9_9ZZZZ) HSP 1 Score: 78.6 bits (192), Expect = 1.660e-16 Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 10 EMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDAL 222
EMGDNL +DLGT RTA I G HTC +LDN ++KC+G + S GQLGL D RGD +G MGD+L
Sbjct: 103 EMGDNLTAIDLGTGRTATAIAAGNHHTCAILDNASIKCWGSNAS-----GQLGLGDTSTRGDGSGEMGDSL 168
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Match: A0A150G0E4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0E4_GONPE) HSP 1 Score: 80.9 bits (198), Expect = 1.750e-16 Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 4 PGEMGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQLGLEDDGNRGDKAGSMGDALEY 228
PGEMGDNL VDLGT RTAV + G +HTC VLDN KC+G + A QLG D NRGD G MGD+L +
Sbjct: 73 PGEMGDNLPFVDLGTGRTAVVLAGGHYHTCAVLDNGRAKCWGWNN-----AAQLGYGDTNNRGDNPGEMGDSLPF 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15738.3327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15738.3327.1 >prot_H-paniculata_contig15738.3327.1 ID=prot_H-paniculata_contig15738.3327.1|Name=mRNA_H-paniculata_contig15738.3327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp MGDNLADVDLGTDRTAVHITCGRWHTCVVLDNEAVKCFGVSTSDDLGAGQback to top mRNA from alignment at H-paniculata_contig15738:1459..2147+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15738.3327.1 ID=mRNA_H-paniculata_contig15738.3327.1|Name=mRNA_H-paniculata_contig15738.3327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=689bp|location=Sequence derived from alignment at H-paniculata_contig15738:1459..2147+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15738:1459..2147+ >mRNA_H-paniculata_contig15738.3327.1 ID=mRNA_H-paniculata_contig15738.3327.1|Name=mRNA_H-paniculata_contig15738.3327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=432bp|location=Sequence derived from alignment at H-paniculata_contig15738:1459..2147+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |