prot_H-paniculata_contig1573.3325.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1573.3325.1
Unique Nameprot_H-paniculata_contig1573.3325.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
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BLAST of mRNA_H-paniculata_contig1573.3325.1 vs. uniprot
Match: D8LRY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY6_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.350e-7
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    2 WTWYVLIKHASEWLILFVMLWILHSPQPAEGSDYGRVEDGTDG 44
            W WYV++KH SEW+ILFVMLWILH P  AEG      ++G+ G
Sbjct:  254 WDWYVVVKHVSEWMILFVMLWILHDP--AEGGSSLGSDEGSQG 294
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1573.3325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY6_ECTSI1.350e-758.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.844

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1573contigH-paniculata_contig1573:11518..11673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1573.3325.1mRNA_H-paniculata_contig1573.3325.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1573 8112..11673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1573.3325.1 ID=prot_H-paniculata_contig1573.3325.1|Name=mRNA_H-paniculata_contig1573.3325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MWTWYVLIKHASEWLILFVMLWILHSPQPAEGSDYGRVEDGTDGSEDIRG
GG
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