mRNA_H-paniculata_contig15710.3315.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15710.3315.1
Unique NamemRNA_H-paniculata_contig15710.3315.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: D8LKP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKP3_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.080e-138
Identity = 211/291 (72.51%), Postives = 231/291 (79.38%), Query Frame = 1
Query:    7 QNLARDPWSSPPTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVAN----GNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASYR 867
            +NL RDPWSSPPTAAE+A+LDLVYVNDR+IAM FP+DKRP    P                 +G  P P  +     GNDID+VAA+LRSRH GHYMVWNVSEEGYDYS+F+DQVLEFRFPGHPAPPLG+LFK+CTS+ESWL AD KN AAVHCLTGRGRTSTVLACYLAWVGE S+PSEAL+HVA+CKGV MERLTIPSQRRYLSYFSSVMEGVRPR EPLLLRRVIMNTIPTFG KNG  + PG         E   A GEG +G ALGCCPYIQVFK GALIFTA+YR
Sbjct:   68 ENLVRDPWSSPPTAAELASLDLVYVNDRVIAMGFPVDKRPPSAAPGV---------------EGPSPPPRASATTRAGNDIDLVAALLRSRHAGHYMVWNVSEEGYDYSLFQDQVLEFRFPGHPAPPLGMLFKMCTSIESWLLADPKNVAAVHCLTGRGRTSTVLACYLAWVGEVSAPSEALEHVASCKGVAMERLTIPSQRRYLSYFSSVMEGVRPRSEPLLLRRVIMNTIPTFGTKNGGVIGPGKGAAAKAEEEAVAAGGEGEDG-ALGCCPYIQVFKGGALIFTATYR 342          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A7S2BZI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZI3_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.190e-92
Identity = 147/270 (54.44%), Postives = 179/270 (66.30%), Query Frame = 1
Query:   61 ALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDAL--GCCPYIQVFKSGALIFTASY 864
            ALDL Y+ +R+I+MA P D R                       + + P+     GN+IDV+AA+L  RH GHYMVWNVSEE YDYS F DQVL+F+FPGHPAPPLGLLFKICTS+E+WL AD+ N A +HCLTG+GRT+T+LAC+L W GEFSS  E LQ +A  KG  +ERLTIPSQRRYL YFS++++GV+PR EPLLLRR+IMNTIP FGM                  +  V   E  E D    GCCPYIQ+FK G LIFT ++
Sbjct:   69 ALDLTYITERVISMAMPYDIR-------AEMIAQAKETMGGDFARKKSPE---KKGNNIDVIAALLNHRHAGHYMVWNVSEEKYDYSKFSDQVLDFQFPGHPAPPLGLLFKICTSIENWLAADSMNVALMHCLTGKGRTATILACFLCWSGEFSSVMEGLQFIAEKKGETIERLTIPSQRRYLQYFSNMLDGVKPRSEPLLLRRIIMNTIPKFGMPR---------------HDNQVQGSEESEQDPQMRGCCPYIQLFKGGKLIFTTAW 313          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A7S2S2N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2N4_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.110e-86
Identity = 153/290 (52.76%), Postives = 185/290 (63.79%), Query Frame = 1
Query:    4 IQNLARDPWSSPPTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDA--LGCCPYIQVFKSGALIFTASYR 867
            +  LA  P +     A +++LDL YV  R++AMA P D    PR                  + GQ        GN+IDVVA  L  RH GHYMVWN+SEE YD S F DQVLEF FPGHPAPPLGLLFKICT+LE+WL AD  N A +HCLTG+GRT+TVLAC+L W+G+FSS  EALQ+VA  K   +E+LTIPSQRRYL YF ++++GV+PR EPLLLRRVIMN+IP FG + G    P            +   G    GD   LGCCPY+Q+FK G LIFTAS+ 
Sbjct:   72 LLGLAPVPGAGERWDAAVSSLDLTYVTPRVVAMAKPHD----PRAELLAAAKASLGGAVVRAKPGQ--------GNNIDVVARFLDERHSGHYMVWNISEEKYDTSKFHDQVLEFNFPGHPAPPLGLLFKICTALENWLDADPANVAVMHCLTGKGRTATVLACFLTWMGDFSSVMEALQYVAEKKRDSVEKLTIPSQRRYLQYFGNMLDGVKPRSEPLLLRRVIMNSIPKFGTQLGDVRDPSLPP--------SSMAGTLPPGDPRDLGCCPYLQLFKGGKLIFTASWN 341          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A067CCY4_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CCY4_SAPPC)

HSP 1 Score: 278 bits (710), Expect = 2.710e-86
Identity = 140/286 (48.95%), Postives = 181/286 (63.29%), Query Frame = 1
Query:   10 NLARDPWSSPPTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASYR 867
            NLA DP +      ++ AL+  YV + ++AM FP                           +GQ  +  + + N ID VA+VL S+H GHYM+WN+SEEGYDY+ F++QVLEF FPGHPAPPLGLLFKIC S+ESW  AD KN A VHCLTG+GRT TVLACYLAW+G F+SP EAL+ V   +  P+E+LTIPSQRRY+ YF++V++GV+PR  PLLLRRVI+N+IP FG +                        +G E    GCCPY+Q+FK G L+FT ++R
Sbjct:   44 NLALDPHAP----IDVNALNFTYVTENLVAMGFPT--------------------------KGQCNRGPIRD-NPIDAVASVLNSKHKGHYMIWNLSEEGYDYNYFDNQVLEFYFPGHPAPPLGLLFKICASIESWSNADDKNLAVVHCLTGKGRTGTVLACYLAWIGRFASPMEALEFVGDARRTPVEKLTIPSQRRYIQYFTNVLDGVKPRSMPLLLRRVIINSIPVFGART-------------------TVDDDGTEVTEEGCCPYVQIFKGGKLVFTTTWR 279          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A1V9Y613_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y613_9STRA)

HSP 1 Score: 271 bits (692), Expect = 7.770e-83
Identity = 138/286 (48.25%), Postives = 178/286 (62.24%), Query Frame = 1
Query:   10 NLARDPWSSPPTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASYR 867
            N A D    P    ++  L+  YV + +IAM FP                           +G + +      N ID VA++L +RH GHYM+WN+SEEGYDY+ F++QVLEF FPGHPAPPLGLLFKIC+S+ESW  ADAKN A VHCLTG+GRT TVLACYLAW G + SP EAL+ V   +  P+E+LTIPSQRRY+ YF++V++GV+PR  PLLLRRVI+N+IP FG +                 ++A  T E       GCCPY+Q+FK G L+FT ++R
Sbjct:  107 NQALDSSGGP---VDINTLNFTYVTENLIAMGFPTKTH---------------------GSRGAIRE------NPIDAVASILNTRHKGHYMIWNLSEEGYDYNYFDNQVLEFYFPGHPAPPLGLLFKICSSIESWTSADAKNIAVVHCLTGKGRTGTVLACYLAWTGAYDSPMEALEAVGDARRTPVEKLTIPSQRRYIQYFTNVLDGVQPRSMPLLLRRVIINSIPVFGART-------------TVEDDAEVTEE-------GCCPYVQIFKGGKLVFTTTWR 342          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A7S3HQ17_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ17_9STRA)

HSP 1 Score: 266 bits (680), Expect = 6.700e-81
Identity = 131/273 (47.99%), Postives = 175/273 (64.10%), Query Frame = 1
Query:   43 TAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTAS 861
            T   +  LD+ YV + I++M+FP D                        + G         GNDID+VAA L+ RH G +M+WN+SEE YDYS F DQVLE++FPGHP+PPLGLLFKICTS+ESWL AD KN A +HCLTG+GRT+ ++AC + W+GEF+SP EALQ++A  + + ++ LTIPSQRRY+ YFS++++GV+PR EPLLLRRVI+N IP FG  + +                        EG + GCCPY+Q+FK+G LI TA+
Sbjct:   89 TKEAVQRLDMNYVTENIMSMSFPCD---------------------FTKKTG------TQVGNDIDIVAAFLKKRHEGKFMIWNISEESYDYSKFADQVLEYKFPGHPSPPLGLLFKICTSVESWLDADEKNVAIIHCLTGKGRTAALVACVMTWIGEFASPMEALQYIADRRRITVDHLTIPSQRRYIQYFSNMLDGVKPRSEPLLLRRVIINGIPVFGSDSSE------------------------EGGSQGCCPYVQLFKNGKLIATAA 310          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A024TDE9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDE9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 2.250e-80
Identity = 140/271 (51.66%), Postives = 170/271 (62.73%), Query Frame = 1
Query:   52 EMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASY 864
            ++++L+  YV D I+AM FP                            G    P+    N ID VA  L + H GHYM+WN+SEE YDY+ F++QVLEF FPGHPAPPLGLLFKIC S+ESW  AD KN A +HCLTG+GRT TV+ACYLAWVG F SP EALQHV      P+ERLTIPSQRRYLSYF++V++GV+PR  PLLLRRVI+N IP FG +                 EE   T E VE    GCCPY+Q+FK G L+FT ++
Sbjct:  114 DISSLNFTYVTDDIVAMGFPTKGN------------------------GHKMGPI--KDNPIDAVAKHLNTEHKGHYMIWNLSEESYDYTCFDNQVLEFYFPGHPAPPLGLLFKICASIESWCAADPKNIACIHCLTGKGRTGTVVACYLAWVGLFDSPMEALQHVGDRCRTPVERLTIPSQRRYLSYFTNVLDGVKPRSVPLLLRRVIINQIPVFGSRT--------------TVEEDGLT-ELVEE---GCCPYLQIFKGGKLMFTTTW 340          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A6G0WDR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDR9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 3.440e-80
Identity = 139/275 (50.55%), Postives = 170/275 (61.82%), Query Frame = 1
Query:   40 PTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASY 864
            P   +++ L+  YV + +IAM FP                          +Q   P       N IDV+A  L + H GHYM+WN+SEE YDYS F++QVLEF FPGHPAPPLGLLFKIC S+ESW  AD KN A VHCLTG+GRT TV+ACYLAW+G F SP EALQHV+      +ERLTIPSQRRYL YF++V++GV+PR  PLLLRRVI+N IP FG +                 EE   T E VE    GCCPY+Q+FK G L+FT ++
Sbjct:  103 PHQVDISTLNFTYVTEHMIAMGFPTKNH--------------------GNKQSMGP----IKDNPIDVIAKHLNAAHKGHYMIWNLSEETYDYSHFDNQVLEFYFPGHPAPPLGLLFKICASIESWCAADGKNVACVHCLTGKGRTGTVIACYLAWIGLFDSPMEALQHVSDQCKTSVERLTIPSQRRYLQYFTNVLDGVKPRSVPLLLRRVIINQIPIFGSRT--------------TVEEDGLT-EIVEE---GCCPYLQIFKGGKLVFTTTW 335          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: H3GE86_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE86_PHYRM)

HSP 1 Score: 264 bits (675), Expect = 2.430e-79
Identity = 128/237 (54.01%), Postives = 164/237 (69.20%), Query Frame = 1
Query:  229 NDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDAL------------------------GCCPYIQVFKSGALIFTASYR 867
            N ID+VA  L  +H GHYM+WN+SEE YDY+ F++QVLEF FPGHPAPPLGL+FKIC+S+ESWL AD KN AA+HCLTG+GRT TV+ACYLAWVG+F +  E+L++VA  +   +E+LTIPSQRRY+ YF++VMEGV+PR  PLLLRRVI+NTIP FG +  + + P           E V    GVEG++L                        GCCPY+Q+FK G L+FT ++R
Sbjct:  178 NPIDLVAMYLNGKHGGHYMIWNLSEETYDYTYFDNQVLEFNFPGHPAPPLGLVFKICSSIESWLQADEKNLAAIHCLTGKGRTGTVIACYLAWVGQFPNAMESLEYVAEQRQTSVEKLTIPSQRRYIQYFNNVMEGVKPRSSPLLLRRVIINTIPVFGER--RVLEPAKKDSSTDDGSETV----GVEGESLTSPATAAEXXXXXXXXXMHETVEEGCCPYLQIFKGGKLVFTTTWR 408          
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Match: A0A485L0S5_9STRA (Aste57867_14201 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0S5_9STRA)

HSP 1 Score: 259 bits (662), Expect = 6.240e-79
Identity = 136/277 (49.10%), Postives = 166/277 (59.93%), Query Frame = 1
Query:   52 EMAALDLVYVNDRIIAMAFPIDKRPMPRPPXXXXXXXXXXXXXXXXRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVSEEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAVHCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQRRYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGXXXXXXXXXEEAVATGEGVEGDAL------GCCPYIQVFKSGALIFTASY 864
            +++ L+  YV D +IAM FP                            G    P+    N ID VA  L + H GHYM+WN+SEE YDY  F++QVLEF FPGHPAPPLGLLFKIC S+ESW  ADAKN AA+HCLTG+GRT TV+ACYLAW  +F SP EALQHV+      +ERLTIPSQRRYL YF++V++GV+PR  PLLLRRVI+N IP FG +                          VE D L      GCCPY+Q+FK G L+FT ++
Sbjct:  116 DISTLNFTYVTDTVIAMGFPTKGH------------------------GSKSGPI--KDNPIDAVAKHLNAEHKGHYMIWNLSEETYDYVHFDNQVLEFYFPGHPAPPLGLLFKICASIESWCAADAKNVAAIHCLTGKGRTGTVIACYLAWTCQFESPMEALQHVSDRCKTSVERLTIPSQRRYLQYFTNVLDGVKPRGVPLLLRRVIINQIPVFGSRTT------------------------VEDDGLTEIVEEGCCPYLQIFKGGKLVFTTTW 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15710.3315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP3_ECTSI1.080e-13872.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2BZI3_9STRA2.190e-9254.44Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2S2N4_9STRA1.110e-8652.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A067CCY4_SAPPC2.710e-8648.95Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9Y613_9STRA7.770e-8348.25Phosphatidylinositol-3,4,5-trisphosphate 3-phospha... [more]
A0A7S3HQ17_9STRA6.700e-8147.99Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A024TDE9_9STRA2.250e-8051.66Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0WDR9_9STRA3.440e-8050.55Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3GE86_PHYRM2.430e-7954.01Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A485L0S5_9STRA6.240e-7949.10Aste57867_14201 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15710contigH-paniculata_contig15710:119..5186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.7
Seed ortholog evalue6.9e-116
Seed eggNOG ortholog2880.D8LKP3
KEGG koko:K18080
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG2283@2759
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-03_001070.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Exons4
Model size870
Cds size870
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15710.3315.1prot_H-paniculata_contig15710.3315.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15710 119..5186 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929254.1356702-CDS-H-paniculata_contig15710:118..4541622929254.1356702-CDS-H-paniculata_contig15710:118..454Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 119..454 +
1691480788.971159-CDS-H-paniculata_contig15710:118..4541691480788.971159-CDS-H-paniculata_contig15710:118..454Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 119..454 +
1622929254.1545744-CDS-H-paniculata_contig15710:1839..20141622929254.1545744-CDS-H-paniculata_contig15710:1839..2014Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 1840..2014 +
1691480788.9834592-CDS-H-paniculata_contig15710:1839..20141691480788.9834592-CDS-H-paniculata_contig15710:1839..2014Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 1840..2014 +
1622929254.1741762-CDS-H-paniculata_contig15710:4271..43941622929254.1741762-CDS-H-paniculata_contig15710:4271..4394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 4272..4394 +
1691480788.9954274-CDS-H-paniculata_contig15710:4271..43941691480788.9954274-CDS-H-paniculata_contig15710:4271..4394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 4272..4394 +
1622929254.193483-CDS-H-paniculata_contig15710:4950..51861622929254.193483-CDS-H-paniculata_contig15710:4950..5186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 4951..5186 +
1691480789.0037632-CDS-H-paniculata_contig15710:4950..51861691480789.0037632-CDS-H-paniculata_contig15710:4950..5186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15710 4951..5186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15710.3315.1

>prot_H-paniculata_contig15710.3315.1 ID=prot_H-paniculata_contig15710.3315.1|Name=mRNA_H-paniculata_contig15710.3315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
NIQNLARDPWSSPPTAAEMAALDLVYVNDRIIAMAFPIDKRPMPRPPPAE
EAAGGTRSNGGGGRQGQLPQPLVANGNDIDVVAAVLRSRHPGHYMVWNVS
EEGYDYSMFEDQVLEFRFPGHPAPPLGLLFKICTSLESWLGADAKNAAAV
HCLTGRGRTSTVLACYLAWVGEFSSPSEALQHVATCKGVPMERLTIPSQR
RYLSYFSSVMEGVRPRPEPLLLRRVIMNTIPTFGMKNGKAVPPGGGAAAV
AAAEEAVATGEGVEGDALGCCPYIQVFKSGALIFTASYR*
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mRNA from alignment at H-paniculata_contig15710:119..5186+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15710.3315.1 ID=mRNA_H-paniculata_contig15710.3315.1|Name=mRNA_H-paniculata_contig15710.3315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5068bp|location=Sequence derived from alignment at H-paniculata_contig15710:119..5186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATATTCAGAACCTGGCCAGAGACCCGTGGTCCTCGCCACCGACCGCTGC CGAGATGGCCGCGCTAGACCTAGTCTACGTCAACGACCGCATCATTGCCA TGGCCTTTCCGATTGACAAGCGCCCCATGCCGCGCCCTCCACCTGCGGAG GAGGCGGCGGGGGGTACTCGAAGTAACGGGGGAGGGGGTAGACAGGGGCA GCTGCCACAACCCCTTGTGGCGAACGGAAATGACATTGACGTAGTGGCGG CCGTGCTGAGGAGCAGGCATCCGGGGCACTACATGGTCTGGAACGTCTCG GAAGAAGGATATGATTATTCTATGTTCGAGGACCAGGTTAGTTGGTTGCG GGAATCGTGGGAAGGGTCGAGCTGGTGAGGAGGGGGGGGGGGAGTATCAG TCGGGAGGCTACTGTCGGTAGGCATGAATAGACGTGAAAGGGAGCACCTG ATACAACTATCCATCTCGTGTTGATTTGCTTTGTTGGGTGAATATGTTAA AAGGCTCTATCGTATCCCTGCGGCAGTCTAGGTCTCAGACCTTCCGCAGA GTAGATATTTCTTTTTTTGGTAAAACACGAGAAGAATTGGGTAGAGGCGG GGACATCGACTAGTACATCAAATGTGTCTTGCTCCACTGGACACATGAAC CTCCTACGTCATCATCTCGATAATTCAAATATAGATGTGTACTGCCACAG TGACCGCATTGACAAATTACTGTAATGAACATCTCGGACCCTCTATGACC ATGATTGGGATGATCATGATAAGTTATTCAGTAGTATTCAGTAGTGGTAA CGCGTGTGCTTCGACTGCATGTGGTTCTCAGCACCAGTAATGGTCTTTAA GTGGAAGTGCTTTGTCATCTTTCTCCCTTTTTCGCGAAATGTCTTGGGAG CGTATGTTGTAATGAAGTGAGTGGGTGATATGGAGACCCCAAGCCTTTCC ATGGACCCACGCCCAAATGGGTAGGGTAGCTCGTGAACTGAGCATGACTG GAAGTCTAGTCAGAGGTCTTTTAGTGGGTGCAACCTCCACACTGCCTACC TGGTCAAGCCTAACCGGGGTGGCGCCCACCCCGCAGAGGAACATATAGCT CTGTTCTGTTGAAGGAAATGTAGACGTACTTCGGTATGGAAGCATCGGAT AGAGGTTTTTGCCTTAGCATTCCCGGGGTTAAAAAAAACAAACAAAAAAA CAGGCCTTTCAATTTCAACCCAAACCAGCCTTCCGTGAATACAAATAGGT CTACTCAAGAGAGACGGCTCAAGCATGTACTGCGTATAATGCATGGTGCT TCACGATTCAACCTGAAGACGGAAAGTCTTATGTATCTTCTTTCCGTAAC TCCTCATGGCTTACTACAAGATGAAGCGAATAAGATGCAAAATTCGATTT CAATGGGTAAAAAAACAAAGCGGAATTTGGGCCGTTATTTTGTTACCAAT TTTTAGGCTAAGTCATTACCCCCGTTTGATCTAATTTTGATGATAAAAGT GTATTCACTACTACACAAGTGTGGATTAATGTCAGCTGGATAACCTCAAC ATGGGTACAGGGGAGTGTTATTATATGAGGTTTAGATTTCTAGTTCAACT TATTGTGGCAGGATAATATATTACCCCTCCCCCCCCCCCCCCCCCCCCCC CCCCCATTCCCCCCCCGGCTCATGTTGAAAATTTGACTTGAAAAAAAAAA AAAAAAACTTGGTTGGATCAGGTGTTGGAATTTCGATTCCCAGGGCATCC CGCACCCCCTCTGGGCTTATTGTTTAAAATTTGCACCTCTCTGGAGAGCT GGCTGGGAGCCGATGCTAAGAATGCCGCCGCGGTGCATTGTTTGACAGGA AGGGGGCGGACCAGCACAGTGCTGGCCTGCTATCTCGCCTGGGTCGGTGA GTGGAGCATGACGCGTACCTTCTTAATTCGGGGTCGTGCAGAAGGAACTC TTTTTTATGCTTTTTCTTTATTGGATATATTTTTTCAGTGTTGTCACAGA TGATAACAGCTTCATTTTAAGTGTTGACGTGCTGTAGCGAGTTTGACCTG TTGAAATCGGTCTTGACTTTCTATTCATGTACTTGACTGGGAAATACTTG GGGTACGCTGATTTATATGGTGAGCGTAAATTGATGTGCTGAGAAAGAAA AAAGAGGCACACACATGACAGCCCCGGATTGCATGAAATAATGTTGATGT CATACGTAACGTTGAGCCCAACTCTCGTATTTGCAATAGTCTTGGAAAAC ATGAACGCGGATTCCATCCTGAGGTCATATATCCCATAATTATGGATCTC GGATCATCACTATCTATGCAGTCATAAGCAACTCTCAAAATCCGTGAGGA GGGCGGGGGTGGGAGGTGGCATACTCTGGCGTGCTGCCATATCCTGTATA TCGTGTTTGTTCTGTCTGCTGCTCATGCGAGCAAAGGTGCTCCCAGTATT GAAAAAATGTTGAGTATACCGGTCAGTATTGCCAGTATTTTGATACTCAG TATCGCTTCCGTATCGTTTTTTTTTGTTTGTTTTAACCCCCGAAAGGCTG AGGCAAAAACCTCTATCCGATGCTTCCATACTTGAAGTATTTTACCTATG TCTACATTTCCTTCAACAGAATAGATTTATTTATTCCTCTGCGGGGTAGG CGTCACCCTGGTTCGGCCGAACCAAGTAGGTAGTGTGGGGGGGTTGCGCC CACTAAAAAACCTTTGACTAGACTTCCAGTCATGCTCAGTTCATGAGCTA CCTTACCCGTTCGGACGTAGGTCCGTGGCTTCCGTATCGTTAGTATAATC AGCGCCAACACTTCGTATTCTAGTATACTGCACTGGGAACACCTTTGCAT GCCAGGGACATCGTGATACACCCTCCCGGTCAACGTCAGGTGCGGTGTAA CAGTCTGCGCGCTGTCTCCAGTCCTTGCTATCAGAGCTGTGCAACCGATC GAGGTATCTGGTGCGGAAGCAGGGTGAAGCGAAGCTCCTCTGGTTAAAGC AAGCTTTGTATCGTTTCTATTGGATATGGTTGCGCACAAAAAATTATTCC ATCCGCAAATCTCGATTTGCATAGCTAACGATGATGTGCTCCTTGCAGAT CCCGTCCGGACCGCAGCTCAACCGTTTCAGATTCGTACCTTCCGAGGGAG ATACGAATAGTAACAGGTTGTGAGACAGTTTTGTACCGAGACGTTGGTGT AGATAGACTGGAGTTTGGAATGAGGTCATCTGTGAGCTATACACGACCCA ATGGGAAGTCGCGAAGTAGAATTTTTCTCGGCGCAAACTCTCTTCGCGTA AACACTCTATTGTGTATGTAGAGCTTTTATCGTCAATTGTTTGTCGGAAT GTGCATACAACAACCCTCGTGCATACTACCTTCCGTGATCACGTCCAAAA TATTTTGCCGGGCGATTATCAGGCTCTTCCTGTAAACTACGGTGTATTTT TCGAGGGGGAAACTAGCTTTAAGCTCAGGTCAGCTCGGCGTGATATGTTA CTACCCGTCACTTGTGTCTCATTTCACGTTTTTGCTTCGTTTCTCGTTCA TTTTTTGCTCATTGTGTTTGTTTGTTTTTTTGCGATCTTTATCGCTGATG GCCATATTGTTCGGTTGAAGCGTTCGGTTTGACGGGGGTTCTGAGCCCTG TATCCCACTGACCTACTAGTAGTCCGTCCAAATGATCATCTTCCTAAAAA GGTGTACTCGGCATTCGTATCATGTATCACCAAAAATTGCGCCCGTGGTT CTTTTCTTACTGCAAATGCCTCCCTATGTCCATGAATCGGTCCACCGTGT TGATCGTGCTCATGTTAGCTCCCGTCTTGTTTCGTTGTCTCTTGCTCCAG ACACATAGGTCTAGCCGTCTAGCTTGCTTTCATTAACATTTTTGTTTTCA ATTTTACTAGGGTAATACCGGGCAGAGGCCCAGACACTGTAAAATACTTA AGTATGGAAGCATCGGTAAAGGTTTTTTGCCTTAGCCTTGCGGGGGTTAA AAAATTAGTAAGTGCCCAGACACTACAATAAAGCACGATATAACGCCCCC TGTCGTGGAATGAGACATTCTTTCATTCATTCACTCACTGTTGAGAAAGG ATCGCATGGCCTGTTCATGGATGGATCCAACGTATTTTTTTTTAAACTTG CAGGAGAGTTCTCTTCGCCGTCCGAGGCCTTGCAGCACGTGGCGACATGC AAAGGAGTCCCCATGGAGCGACTCACCATCCCGAGCCAACGGCGATACCT CTCGTACTTCTCCAGCGTCATGGAGGGTATGTGTAGCATAATACAGTAGG GCGGTAATAATAACCCCGCTGCGTGTCGGTTTTTCGATGATGTGGCGTGA AAAGACGATTCGTGTGTATATTTGTGTATTATTCCCATTCGCCTGATTCA GATAAGACTTGACGTGATAATTTCTGTCAGTTCGTATGGGCTAAAAAATG GCTACTGGTAGTGGTGTAGATAAAACAGTCCCTGGCACTTGATTCAAATA AGGGTTTTCTTGAGATATATCCTCCATCTGTGCCTACGGGAAAATGACTA ATAACATTGATACAAAGTTCACGCGGTCAAATCCGGTTTGTTCATTGATG GATCTCCATCTGTGTCCATGTGAAAACAATTGCTACCTGTGGTACACTTT TTTTTTCATGTTGAAAAAAAAGAAAGAAAAAAGTAAGGCATCTTGAAATC GATCAATTGGAACAATCCTAAACGCTAACAAATGTTGGAGTGAACTAAAA TCGAATGAAAACGTAAATCTAATCCCCCCCTGCCCCCCCCCCCAAAAAAA AAAAAAAACCCAACAAAAACAAACACCCACAGGTGTCAGACCGCGCCCGG AGCCCCTTCTTCTAAGGCGCGTGATCATGAACACCATTCCCACCTTCGGC ATGAAGAATGGGAAGGCGGTGCCCCCTGGGGGTGGCGCAGCGGCCGTGGC CGCAGCGGAGGAGGCGGTGGCTACCGGGGAGGGTGTCGAGGGTGACGCGC TGGGTTGTTGCCCGTATATCCAAGTCTTCAAAAGCGGGGCGCTGATATTT ACCGCCTCTTACAGGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig15710:119..5186+

>mRNA_H-paniculata_contig15710.3315.1 ID=mRNA_H-paniculata_contig15710.3315.1|Name=mRNA_H-paniculata_contig15710.3315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at H-paniculata_contig15710:119..5186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATATTCAGAACCTGGCCAGAGACCCGTGGTCCTCGCCACCGACCGCTGC
CGAGATGGCCGCGCTAGACCTAGTCTACGTCAACGACCGCATCATTGCCA
TGGCCTTTCCGATTGACAAGCGCCCCATGCCGCGCCCTCCACCTGCGGAG
GAGGCGGCGGGGGGTACTCGAAGTAACGGGGGAGGGGGTAGACAGGGGCA
GCTGCCACAACCCCTTGTGGCGAACGGAAATGACATTGACGTAGTGGCGG
CCGTGCTGAGGAGCAGGCATCCGGGGCACTACATGGTCTGGAACGTCTCG
GAAGAAGGATATGATTATTCTATGTTCGAGGACCAGAATATTCAGAACCT
GGCCAGAGACCCGTGGTCCTCGCCACCGACCGCTGCCGAGATGGCCGCGC
TAGACCTAGTCTACGTCAACGACCGCATCATTGCCATGGCCTTTCCGATT
GACAAGCGCCCCATGCCGCGCCCTCCACCTGCGGAGGAGGCGGCGGGGGG
TACTCGAAGTAACGGGGGAGGGGGTAGACAGGGGCAGCTGCCACAACCCC
TTGTGGCGAACGGAAATGACATTGACGTAGTGGCGGCCGTGCTGAGGAGC
AGGCATCCGGGGCACTACATGGTCTGGAACGTCTCGGAAGAAGGATATGA
TTATTCTATGTTCGAGGACCAGGTGTTGGAATTTCGATTCCCAGGGCATC
CCGCACCCCCTCTGGGCTTATTGTTTAAAATTTGCACCTCTCTGGAGAGC
TGGCTGGGAGCCGATGCTAAGAATGCCGCCGCGGTGCATTGTTTGACAGG
AAGGGGGCGGACCAGCACAGTGCTGGCCTGCTATCTCGCCTGGGTCGGTG
TTGGAATTTCGATTCCCAGGGCATCCCGCACCCCCTCTGGGCTTATTGTT
TAAAATTTGCACCTCTCTGGAGAGCTGGCTGGGAGCCGATGCTAAGAATG
CCGCCGCGGTGCATTGTTTGACAGGAAGGGGGCGGACCAGCACAGTGCTG
GCCTGCTATCTCGCCTGGGTCGGAGAGTTCTCTTCGCCGTCCGAGGCCTT
GCAGCACGTGGCGACATGCAAAGGAGTCCCCATGGAGCGACTCACCATCC
CGAGCCAACGGCGATACCTCTCGTACTTCTCCAGCGTCATGGAGGGAGAG
TTCTCTTCGCCGTCCGAGGCCTTGCAGCACGTGGCGACATGCAAAGGAGT
CCCCATGGAGCGACTCACCATCCCGAGCCAACGGCGATACCTCTCGTACT
TCTCCAGCGTCATGGAGGGTGTCAGACCGCGCCCGGAGCCCCTTCTTCTA
AGGCGCGTGATCATGAACACCATTCCCACCTTCGGCATGAAGAATGGGAA
GGCGGTGCCCCCTGGGGGTGGCGCAGCGGCCGTGGCCGCAGCGGAGGAGG
CGGTGGCTACCGGGGAGGGTGTCGAGGGTGACGCGCTGGGTTGTTGCCCG
TATATCCAAGTCTTCAAAAGCGGGGCGCTGATATTTACCGCCTCTTACAG
GTAGGTGTCAGACCGCGCCCGGAGCCCCTTCTTCTAAGGCGCGTGATCAT
GAACACCATTCCCACCTTCGGCATGAAGAATGGGAAGGCGGTGCCCCCTG
GGGGTGGCGCAGCGGCCGTGGCCGCAGCGGAGGAGGCGGTGGCTACCGGG
GAGGGTGTCGAGGGTGACGCGCTGGGTTGTTGCCCGTATATCCAAGTCTT
CAAAAGCGGGGCGCTGATATTTACCGCCTCTTACAGGTAG
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