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Homology
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: UPI00106D07F6 (E3 SUMO-protein ligase NSE2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D07F6) HSP 1 Score: 83.2 bits (204), Expect = 2.890e-14 Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 2
Query: 719 DDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPMCPVAGCAHHVTRNDLKDDTEMERQLRIARLQ 970
D D + +E+S+ICPLT Q +PV+S+KC+H++E AAI +HI++ + CPV GCAH+VT D++ ++ + RI RLQ
Sbjct: 149 DSDIMIAQASEESVICPLTQKQMVEPVRSKKCHHSFEKAAILHHIRVRQNRVRCPVGGCAHYVTEADIEPNSSL--AFRIKRLQ 230
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A6P8IJL4_ACTTE (E3 SUMO-protein ligase NSE2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IJL4_ACTTE) HSP 1 Score: 82.4 bits (202), Expect = 5.200e-14 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 2
Query: 719 DDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIK--IGKGNPMCPVAGCAHHVTRNDLKDDTEMER 946
+D L + A + CP+T + +KP++ +KC H YE AI HIK + KG CP+AGC H VT+NDL+ +TE+ER
Sbjct: 146 EDADLIMSQATERTTCPITTVEMKKPMRHKKCGHNYEKEAIIQHIKRAVSKGRAKCPIAGCVHFVTKNDLEPNTELER 223
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A6S7HQ65_PARCT (E3 SUMO-protein ligase NSE2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HQ65_PARCT) HSP 1 Score: 81.6 bits (200), Expect = 9.360e-14 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 2
Query: 719 DDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPMCPVAGCAHHVTRNDLKDDTEMERQLRIARLQ 970
D D + +E+S+ICPLT Q +PV+S+KC H+YE A I +HI+ + CPVAGCAH+V DL+ ++ + RI RLQ
Sbjct: 147 DSDIIIAQASEESIICPLTQKQMVEPVRSKKCQHSYEKAGIIHHIRARQNRVRCPVAGCAHYVVEADLEPNSSL--AFRIKRLQ 228
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A6P5AEF3_BRABE (E3 SUMO-protein ligase NSE2 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AEF3_BRABE) HSP 1 Score: 79.7 bits (195), Expect = 5.520e-13 Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 710 GGDDDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPMCPVAGCAHH--VTRNDLKDDTEMERQL 952
GGDDDD + + AE +L CPLT +F++PV+++KC H Y+ I HI+ +G CPV+ CA+ ++ DL+DD EM R++
Sbjct: 145 GGDDDDEIEMTQAEVNLKCPLTQQEFKEPVRNKKCGHVYDKGPILQHIRRKRG-VKCPVSACANTDPISEQDLEDDVEMRRKI 226
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A6A5K4P2_9PLEO (SP-RING-type domain-containing protein (Fragment) n=1 Tax=Decorospora gaudefroyi TaxID=184978 RepID=A0A6A5K4P2_9PLEO) HSP 1 Score: 70.9 bits (172), Expect = 2.420e-9 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 2
Query: 716 DDDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGN------PMCPVAGCAHHVTRNDLKDDTEMERQLRIARLQPDQEPVDDTGDIDD 1012
DDDD + + A S+ CP+T QF+ P S KC HT+E AI + I+ G CPV+GC+H +T NDL+ D + R RI R+Q + D+ D+
Sbjct: 287 DDDDDIVVDRATISIRCPITYQQFKDPYTSNKCPHTFEKNAILDMIRGGPHKIDGHRAVECPVSGCSHMLTANDLRSDALLIR--RIRRVQQAEAAADEDSSDDE 389
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A1Y1WXD3_9FUNG (SP-RING-type domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1WXD3_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 3.770e-9 Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 2
Query: 716 DDDDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPM-CPVAGCAHHVTRNDLKDDTEMERQLRIARL 967
+DDD + I N ++S ICP+T P+ S+ C H+Y + IK IK + CPVAGC H+V+ NDL+ + + R++R R
Sbjct: 177 EDDDNIIITNRQESFICPITKRIMNDPLISKTCKHSYS-SVIKEIIKENNERRIECPVAGCIHYVSLNDLRPNKLLARKIRRKRF 260
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: C3YMQ0_BRAFL (E3 SUMO-protein ligase NSE2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YMQ0_BRAFL) HSP 1 Score: 68.2 bits (165), Expect = 5.100e-9 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 2
Query: 749 EKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHI--KIG-KGNPMCPVAGCAHH--VTRNDLKDDTEMERQLRIARLQ 970
E ++ CPLT +F++PVK++KC H Y+ I HI K G KG CPV CA++ VT DL+DD EM ++++ Q
Sbjct: 161 EVNMKCPLTQQEFKEPVKNKKCGHVYDKGPILQHIRRKRGVKGGVKCPVGACANNDPVTEQDLEDDVEMRKKIQKKNRQ 239
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A0A3N0YNL2_ANAGA (E3 SUMO-protein ligase NSE2 n=5 Tax=Cyprinoidei TaxID=30727 RepID=A0A3N0YNL2_ANAGA) HSP 1 Score: 65.9 bits (159), Expect = 2.220e-8 Identity = 62/233 (26.61%), Postives = 110/233 (47.21%), Query Frame = 2
Query: 302 SLRADSGRVATKCQDLGEQIQAETLDLAKQLGMESDSLLDSVVHKKLSEQVDRLARADAMLELKVSAVAKAMNEVSSQVEVDCARNNRENNAAY-EEDVKDYAAQLLAKVT-TDMKGADKKAVESDIYKNVMKQIKVFGGDD----DDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKI---GKGNPMCPVAGCAHH-VTRNDLKDDTEMERQLRIARLQ 970
S +AD G C D+ + L + + GM++ L KKL E + +R D +++ ++++E ++QV RN + VKD ++L+A V+ D++ K D + Q + ++ D+ + + ++ + ICPLT + PVK++KCNH Y+ AA+ IK K N CP GC + V ++DL+ D M+R ++ + Q
Sbjct: 15 SCQADIGA----CMDMISDV---ALGIVEAQGMDNSPSL-----KKLEEMILECSRLDR----EINCFVESVDEKTAQV-----RNEPPEAMVHLRNSVKDRFSELMAGVSDADLQRHSKVVAFKDNVRKYAMQGQTDAENEEEELDEDIAVTQSQTNFICPLTQVEMVNPVKNKKCNHYYDQAAVLEMIKAKHKNKKNFRCPKVGCDNRDVQQSDLELDLVMKRMIQNHKRQ 226
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: UPI000C9E782C (E3 SUMO-protein ligase NSE2 isoform X5 n=1 Tax=Equus caballus TaxID=9796 RepID=UPI000C9E782C) HSP 1 Score: 63.5 bits (153), Expect = 8.730e-8 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 2
Query: 722 DDGLFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIG---KGNPMCPVAGCAHHVTRNDLKDDTEMERQL 952
D+ + + ++ + ICP+T + +KPVKS+ C HTYE+ AI I+ K CP GC+H V +DL D + R +
Sbjct: 112 DEDMIVTQSQTNFICPITQMEMKKPVKSKVCGHTYEEEAIVRMIESKHRRKKKACCPKIGCSHTVKMSDLILDEALRRAI 191
BLAST of mRNA_H-paniculata_contig1571.3313.1 vs. uniprot
Match: A7RQ72_NEMVE (E3 SUMO-protein ligase NSE2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQ72_NEMVE) HSP 1 Score: 63.9 bits (154), Expect = 9.690e-8 Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 2
Query: 644 GADKKAVESDIYKNVMKQIKVFGGDDDDG-LFIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPM-CPVAGCAHHVTRNDLKDDTEMERQLRIARLQ 970
G DKK + ++ + I G +D D L + A CP+T + KP+ S+ C H+YE AI++ IK + + CP++GC H +T NDL+ + E+E + + Q
Sbjct: 119 GFDKKIWK--VHHEKEQMIGAGGAEDMDADLIMSQATVQTKCPITLKEMTKPMSSKNCKHSYEKEAIEHMIKKSRVKSVRCPISGCPHTLTLNDLEVNVELEHHIARKKRQ 227
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 145.2 |
| Seed ortholog evalue | 4.1e-32 |
| Seed eggNOG ortholog | 2880.D8LKY2 |
| Preferred name | NSMCE2 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000793,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004857,GO:0004860,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006469,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008156,GO:0008284,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010015,GO:0010073,GO:0010075,GO:0010082,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010605,GO:0010638,GO:0010646,GO:0010647,GO:0010948,GO:0010965,GO:0012505,GO:0016043,GO:0016604,GO:0016605,GO:0016740,GO:0016925,GO:0018193,GO:0018205,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019787,GO:0019789,GO:0019887,GO:0022402,GO:0022622,GO:0023051,GO:0023056,GO:0030071,GO:0030234,GO:0030291,GO:0030915,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031331,GO:0031399,GO:0031400,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032268,GO:0032269,GO:0032270,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032875,GO:0032876,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034641,GO:0036211,GO:0040008,GO:0042127,GO:0042325,GO:0042326,GO:0042592,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045859,GO:0045862,GO:0045876,GO:0045931,GO:0045934,GO:0045936,GO:0046483,GO:0048364,GO:0048507,GO:0048509,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048638,GO:0048731,GO:0048856,GO:0048869,GO:0050000,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051276,GO:0051338,GO:0051348,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060249,GO:0060250,GO:0060255,GO:0061659,GO:0061665,GO:0062033,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0080036,GO:0080038,GO:0080090,GO:0090068,GO:0090304,GO:0090329,GO:0090398,GO:0097240,GO:0098687,GO:0098772,GO:0099402,GO:0106068,GO:0140096,GO:1901360,GO:1901564,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905392,GO:1905818,GO:1905820,GO:1990234,GO:1990683,GO:2000026,GO:2000104,GO:2000112,GO:2000113,GO:2000280,GO:2001252 |
| EggNOG free text desc. | SUMO transferase activity |
| EggNOG OGs | KOG2979@1,KOG2979@2759 |
| Ec32 ortholog description | Zinc finger, RING/FYVE/PHD-type |
| Ec32 ortholog | Ec-11_006000.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 8 |
| Model size | 1976 |
| Cds size | 756 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1571.3313.1 >prot_H-paniculata_contig1571.3313.1 ID=prot_H-paniculata_contig1571.3313.1|Name=mRNA_H-paniculata_contig1571.3313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
MSRRATSLRADSGRVATKCQDLGEQIQAETLDLAKQLGMESDSLLDSVVH
KKLSEQVDRLARADAMLELKVSAVAKAMNEVSSQVEVDCARNNRENNAAY
EEDVKDYAAQLLAKVTTDMKGADKKAVESDIYKNVMKQIKVFGGDDDDGL
FIVNAEKSLICPLTNAQFRKPVKSRKCNHTYEDAAIKNHIKIGKGNPMCP
VAGCAHHVTRNDLKDDTEMERQLRIARLQPDQEPVDDTGDIDDDTPHETY
V* back to topmRNA from alignment at H-paniculata_contig1571:7356..14693- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1571.3313.1 ID=mRNA_H-paniculata_contig1571.3313.1|Name=mRNA_H-paniculata_contig1571.3313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7338bp|location=Sequence derived from alignment at H-paniculata_contig1571:7356..14693- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGGCGAAACCGTTTGTGTCCGTCGACATTCGATACCCTGCTGCCAGAA
CGCACTCCCCCACACCCTTTTGCGGCGCGGGACTGTCAAAAATTGCGCGT
CGAAATTTGTCGCAATGCAGGCAGCCTATCTGTGAGGGTTGAGAGTTTCA
CATACCTGTAGTCAGGAGGTCAATGATTTGAGCTACGCCTTGGCCACGCA
GCCAACCAGGTACAGGCAGTCAGTAGTATGTGGCCTCGATTTCTTACCAG
TGCCAGCTATCGCCAGCTGAAAGGTGTCTGGCGGAATTGCATTTAGCGAG
GAGCCCACCAATAAAGCAGTTTTTATATTTTCGGTCAATGAGCAAGGTCT
TATCTCAGGTTCCGCGATGGTGCTGGACTGGACTGTAGGTTACGTACAGT
CCGGTACTCTTCATACTATCTGGTTTAGGTATGCACACGCAATAACCTCT
ACAACTTGTAGAGCTGCGCTGGAAGTGCATCACATTGTGCATATTGATAC
ATTGTCGCCCTTTCAACGAGTTAACACAATATATACACACCACCAGAGAC
GCCAGTGTGAGCCATAGTCCAACCTTGAACCCTTCAGTACTCAATCGACG
TTCACGATCCAATGGCGCTATGGAGAGCAATAGCTGCTTTCGACGTTCCG
TGTCAGGTAACCTGACGTTGGTCCTTGCACTCGAGAACGGATACCCCTAA
TGCTTCGAATGTGAGGCAATTCTACCATTCTGAACTTCCAATTATTCGCA
TTGCGTGCGGAAGTGATGGTTTGAGAGTGATAGTTGTCGTTCAAAGGGAA
TCTGTGCTCAAGAGGTACCCACGCACAGTCGTGGTCCAGTACCCAGCAGC
TGAACCCGGACCGGATGTCCAGCGCCCGTAGAATCGGATTTTATTATTGC
ATCCCTGCAAGATGACCTTCACTTTTTCTTTGTCCACTATAATCAAATGA
CATGCGTTGGTATCTCTTGAAATATGACAATGCCAAATGAAGTCCTGATT
TATCGGATGCGACGATTTCTTGACAAGATGATGATGTCAAGTTTGACACT
TTTTTTTTCCCATGTATTCACAAACCGATGAGTGTATTTATCTGGTGTAC
GAATATGTATCCTAACTCGCTCCGATATAAACTACGCAGTACGCCAGATA
TGTGCGGCTTTGTTGTTAGAGTAGCCCCAACCTCACCTTCGCTTTCGCCC
CGCCTACACGATGTCATCTTTTACTCTTTCTCGCGAGAATTAGAACCAAG
AGTGTGGTAGTTACAAGCAAAGGAGAAAAGACAAGGATCAGTCAAGCCAG
TCAAGGGACAATACAGCATGTCGAGAAGAGCGACCAGCCTCAGGGCGGAC
TCAGGTCGAGTGGCGACCAAATGCCAAGATTTGGGGGAACAAATTCAGGC
TGAAACTCTGGACTTGGCCAAGCAGCTTGGGATGGAGAGCGATAGGTAAC
AGCATTATACCATTTTTTTCTGCCGTTTTAAGAAAACCGTAAACCATGAC
TTTCTTCGTGTCTGCCCTCTCGCACCCAAGAGACGCAGGTTAAGTGTCTA
CCGTGCTGTATCCACGTAAGCACACGTTCCCTCCCGCTGTTGTATTACTC
CCTCGCCTGGGTTGCTGTTCGTTATTTTGAGCCCAAGATCAGCTCAGCTG
ACTGAAAATAACGAAGGTAAGATACTGGTCTCGAGCCCGCGAACGCTCCG
AACTTGAAATAACAGGAGGCCTGAAGGGAGAGAAGCGGTCAGCCGAAACC
ACACCATGTAGCAACGGCAGTATCAAGGGTCAAACTAAGACCTTAACTCA
CGTACGTCCGCCGTCGTTTCATCTTGGGGGCGTTCAGCTCCTTAGCTGCG
CGTTGTCTTTGCCTACCCTGTGATCGCCAACACCCAATCAACGTTCCCCA
CTGGCGTCTCAAATTGTATCCATAGCGGCGTGTCTTGTGCCATTTCGTGC
CAATTTTTCAGAGTTGTCCCTCATGTATGTATGTATGCCTGTCGTCTATT
TTCTGTTTTATCGTACTTGATCGTTTGTTTGTTTTTCTTGGGGGATGGAA
CCAGCCTCCTTGATAGCGTCGTGCATAAGAAGCTGTCGGAGCAGGTGGAT
CGATTGGCACGAGCAGACGCCATGCTCGAGTTGAAGGTGTGAAATAGCTG
CTGGAGCAATAGATGGGGAACAACCGTCGAGCTTCGTTCAATATGATTAG
ACGGGATTTTTTTTTCTGCAAGCCTGTCGTACAACAAACACACCGTGTGG
CATTTTTTTACGGTTCGGCGGAAAATAGCGTGCTGATGCTTGACATAAGT
GTGAACTGATAGGATCTGCTTTTCAGTGGGATGGTCCGATCTGATCTGTT
TTACAGGTGTCCGCAGTGGCGAAAGCCATGAACGAGGTTTCCAGCCAAGT
GGAAGTGGATTGCGCGAGAAACAACAGGGAGAACAATGCAGCATATGAGG
TCAGCCAGAACGATACACAGCAGGAAAAGTAAGCTTGCGTTAACTTGAGA
GTGTATTCCCCCCTTAATTATATAATTTTGCTGATAAGTGTACTCAGTAT
ACAAGTGCAGTTTGGAGTCAGGTCCATATCGTCAACGTGGGTACGATAGA
GTTAATATGTGAGCTTGATGGCTATAGTTCAACTAACTGTAGAAGGCGTG
TTGGCTTACGAATTAAAATTTCAGTTAGTGAAATGGAGCGGTTTTCGTTT
TTTAATTGTCAGCTGTTCTCCCTCCACCCCCTCTCCGTGGTATTCTTTTT
GGACCGGAATTCCATCGCAACAGCAGCCACGCCAAGGTCGTGTTTTTTGT
ATTTTTGCTGGTTAATTAATACAAGCGTTGAGCGTTGTCTTTTCCAAGCA
CGCTATGGCTCGCGTTCTTCGGTGGAGCTCTAGCGTTGACATAACACCTG
GATGTAGTTGGCTAAGTTTGCGTTTAGACAGTGTCTATGGCCGAGACTCG
CGTACCGCTTGTTACTGTTGGGTTTTGGGAGAGCATGATGTACCGCGTAG
ACATCCTCGTTTACAGGTTGGCGTTACGATAGCTGTTGCCAAGGTGGCGC
TTCCCAGACTTATACGTCATACGGTGACGACGACATTCAACTTTATTTCG
CAAGTTTCTCTCGAACTTCTATCCCCGTCTCGTGGTATTTTGCGGAAATC
ACATTGCAATTATATATGTTATATAGCTATTCTGCAGCGAGTCTACGGCA
CCATGTTGGACATCCTCCGAAACGCGTGACTTTCATAGTACTGTACGGTC
CTGTTACCCGCGATATTGCACTCTGAGAAATTAAGTGTGTGTACCTGCCA
ATCCCTAAGCCACATAATGTTCATGCATTTACCTGGCATAGAGTATCGCA
ACCTGCACTCTGTGGATCCTGTTGGTGATGAATCCATGCACCTTTATTTA
AAGCTGCACGATTGAATCACAACATGAATGCGTTGTGCGTATATCTCGAG
TAACACCTCTCTGGTTTGGCGGTATGTGCCACCGGTACGGGCTTAGCGCA
AACTTTTTGACTCGTCGCCTTCGTCGTTTTTGTGCCTGATTCTCCACGTC
CCAAAAGGAAGATGTAAAGGATTATGCGGCACAGCTTTTGGCGAAGGTGA
CGACAGACATGAAAGGCGCGGATAAAAAGGCTGTCGAGTCCGACATCTAC
AAGAACGTCATGAAGCAAATCAAGGTGGAACTTCCGCATTTTTGTGTTTT
GTGTCTTCTTTAGTCTTCATAACATGGTGCCTGTGTGTGTCGCATTGCTA
GTCAACTTGGAGGTTCTCGCCGCCCGCGTATATTTTGTCATGCTTCACCC
CACGTGTTCAGGAATAACAACAACGCATCATATGGTATGTTCTGACCCGT
AGTCTATTTGCGTTTGACGTCAACTTGTCGATCTGCGCAGTGTAGGCGCT
ACAGATGGGGTGATTGTTGCCCTTTGCGCTGTCCCGTGCGGCAAACGGGT
GTCACTTGTATGCCTCTGCTTGCTTCGTGCCTTCCCCGCCGCGGTTGGTG
GTAACAATATCGTGTTTTTGCTCTTCTTTTTTCCAATGCAGTCGGCATTA
ATTGCAAGGCTACTCTTTCCTTCACTATTTCTAAGGCGTGCGCCGTGCAA
GCAGACCTGTAGACGTACAACGGCGATGTTAAGATCATGATTTATCCTTT
ACGCCAGTGTATTTGCCAGTAACGGTCAAGGAGAGTATTGCGACGGATAA
ACAAAAGACGTAAAGGAGAATACTGTTATCGCCAGGGAAGGTTAAAGGAG
AATATTCTGATATTTATGACAAGCAAAGTTAAAGGGGAATATTGTGATGA
CCAATAAAGGTTAAGAAAGTTATTCTGACCCTTAGTTTGTTTTTTAATGT
CTATGGTCCTCCCCCAAGTACAGTTGCTCCGGTCAGCTTTTCTTAGATAC
AGTATTTGAATTGATAAAATTCTTACCCCTTCCTCATGAATAGCTCCAAT
AGCAGGCTCTCGTCCGGATCCCGACCCTTTAACAACAACTTCAACTCAGT
TAAGCTTGTGTTTATCTTGAGCTTATAAAGTAGCCTGTTCAGGTGCTTTT
TGTGCAGCAAATGGTGTACCTTTTCTAGACCCTCTAAGTTCAATAGTAGC
CTCGAACTGCAAAGCTCGTCTCTTCTTGTCTCTTGCAATATCACAGGTAT
TTGGAGGCGATGACGACGATGGCTTGTTTATAGTTAACGCGGAGAAGAGT
CTGATCTGCCCGCTCACCAACGCCCAGTTCCGGAAGCCCGTCAAGTCAAG
GGTGAGGGATGTATGCATGTTGCGACGTGCCACGTGCACCACGTATTTGT
CGTTTCTGGGCCTTCGTATTCCCGTTGGAGACTGCCTCTTGCTGGCTTCA
ATTGAATGCTTAGGATTGATTGACTTAGGGACATCTTAATTTGTTTTTCA
AGTTCACACGTCTTTCCCCTTCCCATGAACGCTCAATTGATCCATTGGCC
ATTGTTCAGTCTGGTCAACTAATTGAAGGGGGAAGCAGCACTCTCTAATT
TCTTCCTTGAAGATCTGTCTCGTGCTGGCAGTATGTACCTAACTTAAGTT
CATGTACAAAACATGTTGGTTGCTCGTCTTTTTTTTGTCATCGCACCTTC
CCTGTTCATTACATCATGCAGACAGCGTCGAATTCATTTATTGTCGTTGT
TTTTAGTGGCGTCTTTGGCGTGCAAGCGTTCGGGGCATGAACAGCGCTGT
AAAGCGCCTGCTCGGCTGTCCCGTCGCCTCCAGGTGTGTCGTATTTGTAG
CTCGTGCCATCGATGCGCCATCGTCACGCCCGATCGGCTTTCGCCCCAGG
GTTGACCACAGCATCACCACTTGAAAAATTTGAATCTTCAGGCCAGAAAG
AACGGCGTTTCGGAAACGAGACGTACGTGAGGCGTGCAGTACGTTTGCAA
GTGACAACACAGCCTCATCGAACGAGCAGGTGTTTGCGATTTCCCCAATT
CCCCCTCGGGTAGGTGAGATTCAGTACACACGGGAGCTCTACCCGTGGAG
CTTTTCAACCCGATCTCCCGTTCACATGGAAGTCGGCATTAGTCGGTATT
TGGAGCTCACAACATGATGTTTTTGCTGGTGCCCATATTTCCTCCCAGAA
ATGTAATCACACGTATGAAGATGCCGCTATCAAAAACCACATCAAAATTG
GAAAGGGCAACCCCATGTGCCCCGTGGCGGGATGTGCACACCACGTCACG
CGAAACGACTTGAAGGACGACACGGAAATGGAGCGACAGGTGAAGAGCAC
TAGTGTTCAAGGATCATGCCAATGAACGCTGTAGTTTTTTCTGCCTGTTG
TCTTTTTTCTGTAGCACACCCGGCAGGGATACTCCGCGACAGGTTTTAGT
CAAGCTAACATTGCTGGACAACGGTAGTACTGGATGTGTTTCAGCATGCA
CTAGTCCGGAGGACAAGCACCCTTGATTTTTTGCTCTGATTTCGGTTGCC
TTGTGTTTCGAAGGTTAAAGGCCTTAGTATGTATTTCATTAAGGAAACTG
ACCCAAGCATTGGAATATGGCCCCTCCCTTATGAGAGGAAAATTATTGGT
GCCATTTGTTAACCCAATTGCGAGTGTTTGTGCCCGAGTTGGGTCTCCTC
CTTAAACACAGGATATCAGTATTGAAGACATAAAACTGCAAAATTTCGTC
TCTCCCCGTGAAGAGACAGTAATACCAATCAGCTACCGTCCGATGTAGAT
ATCAAATATACATTGTACCTTGCAAAAGAGAAATATCTCTTCGTGGTCAA
CTATGTTATTTTCGCTGTCTTACCCTGATGTTTAGCGTTCCCTCCCCCAT
ATTGCCCGCAGCTGAGGATTGCGCGCCTTCAACCAGACCAAGAGCCGGTA
GACGATACAGGGGACATCGATGACGATACCCCCCACGAGACGTATGTGTA
GGCAGTAGGGCTGAAGAAACAAACACAACACTTTTTCACGTCGTGGCTTC
AGGTTACCATAACTGCTGTTCAACATTTCGGCGAACAATCGAATATTTGG
AGTATGTTATTAACAGGAGCAAGACATGATCAACTTCAACCCTACACTAG
GCTCCTCAAAGAGTCCTGTATTGCAAAGAGAGCTACTGGGTGCAGGTAGT
GCACATGATGGTGCGGCGAAAAATAGAAGTCGAGATAGATACGTTTGCTC
TGGTGTGCGCAAATGCGGTAGTCTAGTGTTTTTCCTCCGACAGAAAATGG
AGGCGTGGCGAGGTGTTCAGGGGAAGGGGCGAGCTTTCTGTTGTTTCAAC
ACCCGTTTTCTTCATGTATTTCTTCTAGCGTGTCGGGCCGGCTGAAACAT
CTCGTTTTTTGGTGTGCGTTGTACGCACGGAGGCTGCAAGTGTATCGTGT
GTAGCATGTATAGATGTACTCTGCTCTGATTGTGTGGGTTGGTGCGTTCG
ACTGACGACAATCATCCTGTCAAGCTTGGAAAGGCGAATAGTGTTGCATG
TGGTATTCGTCATCTCTCTCTCACTTCACGAAACGCTCGTCGATTAGGGG
GCATAGTGCTTGACAAATTACGCTCCTCAGGAGAGGCCAAGTCCGTGTGC
ACAGTAGACGGGTATCGTGGCAATTTCCGCTTCCGTATGCTCATGATACT
ACTGCTGTACATATACAAATTAGCTGCGGGTAGGTGTAACGAGTCAGAAA
CGGACCCGGGTACTTCGTTTGATTGGCCGGTTGTCTGTGTGACATGATTT
GTGACAAGTTTTGCCTATGATGACCATAATCGTGGCTAAACCACCTTACA
GGAGGATGGATTCCGATGACGAAAGTATGAGAAATGCGAACCGCTTGAAA
ATGCGCTTTTGGACTCGTGCAGTGCAGGGGCACAGAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1571:7356..14693- >mRNA_H-paniculata_contig1571.3313.1 ID=mRNA_H-paniculata_contig1571.3313.1|Name=mRNA_H-paniculata_contig1571.3313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig1571:7356..14693- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAGAAGAGCGACCAGCCTCAGGGCGGACTCAGGTCGAGTGGCGAC
CAAATGCCAAGATTTGGGGGAACAAATTCAGGCTGAAACTCTGGACTTGG
CCAAGCAGCTTGGGATGGAGAGCGATAGATGTCGAGAAGAGCGACCAGCC
TCAGGGCGGACTCAGGTCGAGTGGCGACCAAATGCCAAGATTTGGGGGAA
CAAATTCAGGCTGAAACTCTGGACTTGGCCAAGCAGCTTGGGATGGAGAG
CGATAGCCTCCTTGATAGCGTCGTGCATAAGAAGCTGTCGGAGCAGGTGG
ATCGATTGGCACGAGCAGACGCCATGCTCGAGTTGAAGCCTCCTTGATAG
CGTCGTGCATAAGAAGCTGTCGGAGCAGGTGGATCGATTGGCACGAGCAG
ACGCCATGCTCGAGTTGAAGGTGTCCGCAGTGGCGAAAGCCATGAACGAG
GTTTCCAGCCAAGTGGAAGTGGATTGCGCGAGAAACAACAGGGAGAACAA
TGCAGCATATGAGGTGTCCGCAGTGGCGAAAGCCATGAACGAGGTTTCCA
GCCAAGTGGAAGTGGATTGCGCGAGAAACAACAGGGAGAACAATGCAGCA
TATGAGGAAGATGTAAAGGATTATGCGGCACAGCTTTTGGCGAAGGTGAC
GACAGACATGAAAGGCGCGGATAAAAAGGCTGTCGAGTCCGACATCTACA
AGAACGTCATGAAGCAAATCAAGGAAGATGTAAAGGATTATGCGGCACAG
CTTTTGGCGAAGGTGACGACAGACATGAAAGGCGCGGATAAAAAGGCTGT
CGAGTCCGACATCTACAAGAACGTCATGAAGCAAATCAAGGTATTTGGAG
GCGATGACGACGATGGCTTGTTTATAGTTAACGCGGAGAAGAGTCTGATC
TGCCCGCTCACCAACGCCCAGTTCCGGAAGCCCGTCAAGTCAAGGGTATT
TGGAGGCGATGACGACGATGGCTTGTTTATAGTTAACGCGGAGAAGAGTC
TGATCTGCCCGCTCACCAACGCCCAGTTCCGGAAGCCCGTCAAGTCAAGG
AAATGTAATCACACGTATGAAGATGCCGCTATCAAAAACCACATCAAAAT
TGGAAAGGGCAACCCCATGTGCCCCGTGGCGGGATGTGCACACCACGTCA
CGCGAAACGACTTGAAGGACGACACGGAAATGGAGCGACAGAAATGTAAT
CACACGTATGAAGATGCCGCTATCAAAAACCACATCAAAATTGGAAAGGG
CAACCCCATGTGCCCCGTGGCGGGATGTGCACACCACGTCACGCGAAACG
ACTTGAAGGACGACACGGAAATGGAGCGACAGCTGAGGATTGCGCGCCTT
CAACCAGACCAAGAGCCGGTAGACGATACAGGGGACATCGATGACGATAC
CCCCCACGAGACGTATGTGTAGCTGAGGATTGCGCGCCTTCAACCAGACC
AAGAGCCGGTAGACGATACAGGGGACATCGATGACGATACCCCCCACGAG
ACGTATGTGTAG back to top
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