mRNA_H-paniculata_contig1571.3311.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1571.3311.1
Unique NamemRNA_H-paniculata_contig1571.3311.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A835ZH45_9STRA (DNA-directed RNA polymerases I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH45_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.920e-42
Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 2 
Query:   98 ADDGDAA--YDVFAQEDDEPQMDEEQVEETQDADMEIVDSGDVSGA--GA--LRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELII 478
            +DDGD A  YD FA + DE   +E   E  Q   +E++++ +  GA  GA  ++ A +RIT+KYMTKYE+ARILGTRALQISMNAP+MVD+E+ TDPLKIA KELRERKIPIKIRRYLPDGS+EDWA+EEL+I
Sbjct:    2 SDDGDHADAYDAFADDGDEDMQEEVADEVGQAGQLELMEADETGGAAPGAPPVKPAQERITSKYMTKYEKARILGTRALQISMNAPIMVDLENMTDPLKIAEKELRERKIPIKIRRYLPDGSYEDWALEELMI 134
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A1Z5JVB2_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVB2_FISSO)

HSP 1 Score: 146 bits (369), Expect = 1.560e-39
Identity = 80/118 (67.80%), Postives = 96/118 (81.36%), Query Frame = 2 
Query:  131 AQEDDEPQMDEEQVEETQDADMEIVDSGDVS-GAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            A EDDE Q D+E ++ T +    IV  G+ S G G   AA +RITT+Y+TKYE+AR+LGTRALQISMNAPVMVD++ ETDPLKIA KELRERKIPI IRRY+PDGSHEDWA++ELI+D
Sbjct:   28 AAEDDELQSDDEGLDVTGEH-TSIVGVGEGSEGGGRSVAAAERITTRYLTKYEKARVLGTRALQISMNAPVMVDLDGETDPLKIAEKELRERKIPIIIRRYMPDGSHEDWAVDELIVD 144
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A1Z5K9F7_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9F7_FISSO)

HSP 1 Score: 147 bits (372), Expect = 4.270e-39
Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 2 
Query:  131 AQEDDEPQMDEEQVEETQDADMEIVDSGD-VSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            A EDDE Q DEE ++ T +    IV  G+   G G   AA +RITT+Y+TKYE+AR+LGTRALQISMNAPVMVD++ ETDPLKIA KELRERKIPI IRRY+PDGSHEDWA++ELI+D
Sbjct:   96 AAEDDEVQSDEEGLDVTGEH-TSIVGVGEGTEGGGRSVAAAERITTRYLTKYEKARVLGTRALQISMNAPVMVDLDGETDPLKIAEKELRERKIPIIIRRYMPDGSHEDWAVDELIVD 212
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A8B7XNY9_ACAPL (RPB6 homolog n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7XNY9_ACAPL)

HSP 1 Score: 144 bits (364), Expect = 5.260e-39
Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 2 
Query:   68 MSDNEANYDGADDGDAAYDVFAQEDDEPQMDEEQVEETQDADMEIVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            M+D E + D  +DG      F     E  +D+E +E+ QD + E  ++ DV  AG  +   +RITT YMTKYERAR+LGTRALQI+MNAPVMV++E ETDPL+IAMKEL+ RKIPI IRRYLPDGS+EDW I+ELIID
Sbjct:    1 MADEEGDVDNFEDG------F-----EDDVDDEPLEDMQDVEEEGGENIDVLPAGEGQQQTERITTPYMTKYERARVLGTRALQIAMNAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDGSYEDWGIDELIID 127
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A7R9ZBL4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBL4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.360e-38
Identity = 84/134 (62.69%), Postives = 97/134 (72.39%), Query Frame = 2 
Query:   95 GADDGDAA-----YDVFAQEDDEPQMDEEQVEETQDADMEIVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            GADDG         DV  + DD  Q D        + D E++ S    G GA  A  +R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW+I+ELI+D
Sbjct:   31 GADDGGRGGGNEDLDVTGERDDNAQEDMNAA--NNEGDGELLGSS-APGGGATGA--ERVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWSIDELIVD 159
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A7S2E4M0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4M0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.400e-38
Identity = 73/99 (73.74%), Postives = 85/99 (85.86%), Query Frame = 2 
Query:  185 DADMEIVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            + D+E++ S   S  G  RA  +R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct:   67 EGDLELLGS---SAPGGSRA--ERVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWKIDELIVD 160
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A7S2Y910_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y910_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.580e-38
Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 2 
Query:  200 IVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            +V  G+   +   RAA +RITTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPL+IA KELRERKIPI IRRYLPDGSHEDW I+ELIID
Sbjct:   71 VVGMGNSDPSSQGRAATERITTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRERKIPIIIRRYLPDGSHEDWKIDELIID 164
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A6U0JRN7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JRN7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.190e-38
Identity = 71/99 (71.72%), Postives = 84/99 (84.85%), Query Frame = 2 
Query:  185 DADMEIVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            D D+E++ S    G  A     +R+TT+Y+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW+I+ELI+D
Sbjct:  105 DGDLELLGSAAPGGGAA-----ERVTTRYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWSIDELIVD 198
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BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: B8C3F5_THAPS (Dna-directed RNA polymerase i (Fragment) n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C3F5_THAPS)

HSP 1 Score: 140 bits (352), Expect = 6.550e-38
Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 2 
Query:  254 RITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            RITT+Y+TKYERAR+LGTRALQISMNAPVMVD+E ETDPLKIA KELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct:    1 RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYLPDGSHEDWGIDELIVD 76
[Close]
BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Match: A0A024TCI1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCI1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.540e-38
Identity = 81/138 (58.70%), Postives = 100/138 (72.46%), Query Frame = 2 
Query:   74 DNEANYDGA-DDGDAAYDVFAQEDDEPQMDEEQVEE-TQDADMEIVDSGDVSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID 481
            D++ +YDG  DDGD           + ++ EE++E   +D   E     ++   G  +   +RITT+YMTKYERAR+LGTRALQISMNAPVMVDIE ETDPLKIAMKEL ERKIPI IRRYLPDGS+EDW+I+ELII+
Sbjct:    2 DDDHDYDGGMDDGDHV---------DEELQEEEIENFDEDGQGEHEGGVELLNEGEKQPNANRITTRYMTKYERARVLGTRALQISMNAPVMVDIEGETDPLKIAMKELAERKIPIIIRRYLPDGSYEDWSIDELIIE 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1571.3311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZH45_9STRA9.920e-4263.91DNA-directed RNA polymerases I n=1 Tax=Tribonema m... [more]
A0A1Z5JVB2_FISSO1.560e-3967.80DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A1Z5K9F7_FISSO4.270e-3967.80DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A8B7XNY9_ACAPL5.260e-3958.70RPB6 homolog n=3 Tax=Asteroidea TaxID=7588 RepID=A... [more]
A0A7R9ZBL4_9STRA1.360e-3862.69Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2E4M0_9STRA1.400e-3873.74Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2Y910_9STRA1.580e-3875.53Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A6U0JRN7_9STRA2.190e-3871.72Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8C3F5_THAPS6.550e-3886.84Dna-directed RNA polymerase i (Fragment) n=2 Tax=B... [more]
A0A024TCI1_9STRA8.540e-3858.70Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1571contigH-paniculata_contig1571:238..7411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score143.3
Seed ortholog evalue8.6e-32
Seed eggNOG ortholog36331.EPrPI00000020416
Preferred namepolr2f
KEGG rclassRC02795
KEGG koko:K00960,ko:K03014
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181,M00182
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0001650,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006383,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.DNA-directed RNA polymerase I, II, and III subunit RPABC2. Source PGD
EggNOG OGs1MGWT@121069,COG1758@1,KOG3405@2759
Ec32 ortholog descriptionArchaeal RpoK/eukaryotic RPB6 RNA polymerase subunit
Ec32 orthologEc-11_006010.1
EC2.7.7.6
COG Functional cat.K
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Exons2
Model size1113
Cds size417
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1571.3311.1prot_H-paniculata_contig1571.3311.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1571 305..6782 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929253.8277123-UTR-H-paniculata_contig1571:237..3041622929253.8277123-UTR-H-paniculata_contig1571:237..304Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1571 238..304 +
1691480788.7930565-UTR-H-paniculata_contig1571:237..3041691480788.7930565-UTR-H-paniculata_contig1571:237..304Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1571 238..304 +
1622929253.8714228-UTR-H-paniculata_contig1571:6782..74111622929253.8714228-UTR-H-paniculata_contig1571:6782..7411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1571 6783..7411 +
1691480788.8236835-UTR-H-paniculata_contig1571:6782..74111691480788.8236835-UTR-H-paniculata_contig1571:6782..7411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1571 6783..7411 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929253.8406634-CDS-H-paniculata_contig1571:304..5611622929253.8406634-CDS-H-paniculata_contig1571:304..561Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1571 305..561 +
1691480788.806883-CDS-H-paniculata_contig1571:304..5611691480788.806883-CDS-H-paniculata_contig1571:304..561Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1571 305..561 +
1622929253.858314-CDS-H-paniculata_contig1571:6622..67821622929253.858314-CDS-H-paniculata_contig1571:6622..6782Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1571 6623..6782 +
1691480788.8149517-CDS-H-paniculata_contig1571:6622..67821691480788.8149517-CDS-H-paniculata_contig1571:6622..6782Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1571 6623..6782 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1571.3311.1

>prot_H-paniculata_contig1571.3311.1 ID=prot_H-paniculata_contig1571.3311.1|Name=mRNA_H-paniculata_contig1571.3311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
MSDNEANYDGADDGDAAYDVFAQEDDEPQMDEEQVEETQDADMEIVDSGD
VSGAGALRAADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETD
PLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIID*
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mRNA from alignment at H-paniculata_contig1571:238..7411+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1571.3311.1 ID=mRNA_H-paniculata_contig1571.3311.1|Name=mRNA_H-paniculata_contig1571.3311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7174bp|location=Sequence derived from alignment at H-paniculata_contig1571:238..7411+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTACAGCACTCTACTAGTGCTCTACCAGTAATTTGTCTTCTACCTACGA
CTAGTGTGTTACACATCATGTCTGACAATGAGGCAAATTACGACGGGGCT
GATGACGGGGATGCAGCGTACGATGTCTTCGCCCAGGAAGATGACGAGCC
GCAAATGGATGAGGAGCAAGTGGAGGAGACACAAGATGCCGATATGGAGA
TCGTGGATTCCGGGGATGTGTCGGGCGCCGGGGCGCTTAGAGCTGCCGAT
GATAGAATTACCACCAAATACATGACGAAGTACGAGCGAGCGCGAATACT
GGGGACTCGGGCGTTGCAGATAAGGTGATATTTATAAGTTTGTAGTGGGT
GATCATGTTGTGGGGAAGTCGTCTTCCTTGATAACACTGACAATCAGTTT
CACTGGTGTGGTGTTCGGCTGTGACACTGGTACACGCTAGTTTGAAACCC
TCGCCCTTCCAACCTGGTTGAAACGTTGAACTGCCGAAGTGGTACAACGA
ATCTGAAAAATTGCCAGGCAATTATACAAGTGACGTTTATGAATGCGGTA
CTGGTGGCGTGTCGGTGCCTTCACTGATGGCTAGATGGATGGGATGGCCA
CAGTGTCCCTAGTTAAGAACAACTTTATCTCTCATTCATGACTCGCCGTT
GTACTGTCTGTTGTTTGCGCCTCATAGTTTGGTCACTTGCGTGTACTTCC
CTCTCAAAATGTAAGTTTGTGTGCTTGCCGAATAAGTGAAGTCGTTCGCT
GTTGGTGTTGGGTTTGAGAGTACCAGCGGTAGTAATATAGCCGATATCCT
TCCACGATCTACGCACATATATTTTGCTTAACGCCTTTTCGGGGGGAGGG
GTTTGTGCCAGAGTTGGTGCGCCGCAGCTGCCTCAATCGAGTGTCGATCA
TTATCTTGCTGGGACTGCGTTACGCCGGACTGAGACTGACCATGTAAGAG
CACCGACTCATAGCCATGATTCATTGGCACACACGGGCAAAAAGTCGGTG
CGAAACGGTGCTCATTCTAGGATGAGTTGGCCGCTGCGGGTGATCGTCTC
CAGTCCTGTCTACCCTAGTAGCAGCACGAAGATAGGCAGTCCCGCGACGC
CACGGTGCTCTGCACGTAAAATGTATATGATATAGTATAGTTATCCAGTA
TCCTATGATATACGAGATCTGTCGAAGTTTTGAAGTTTACCCGAATTGGG
CATACTTAGAAACTTGTTGCAACGAAACCTACTGGTTTCTCTCTTGCCTG
TTATGGTCTTCTACTGAACTCAGTATCGTATGTTATTTGTGTTGCCAAAG
ATAAGATATGTAAAAAAAAAAAAAATTGAAGTGCACTCCTGTTGGGTGGA
GCCATAGAGGGTGGTCGATGGCCTAAAACCGGTCCCAACGACCAAAATGT
TAATCACCTATTTATTATTTTCACGTCATAGCCCAAAAATTACAAACTAC
TTGTTCTGGGTATCAAATCTTATATCGAGCAAATCTTAGCTCTTAGATCG
AACTGGCTAATGTCAATGTATTAAGTAAGTGTCGACAGCTGTAATCTAGT
GCATGCGCAGTGGCGATTTTGGATTCGTCTTATGTTGGTGATGCACGCCA
TGAAAATAGTGTATTTTGAAGATATTTCTGTTCGTAGCTCGCGCATTATT
TCGTTAAGCGAAAATCGCCACTGCACATGCACTAGTATTGGTCATAGCAA
ACACAGCACAACAAAAGCTCACGATTCCTCACAGTTGTCGACGAGAACTG
CCTCATCAAATATCTCATGGCTTACCATGGGGCCAAGGTTTCGATACTAG
GTTCAAGTATTTAACAATGTAGAACATAACTCAGCATGACTTGGCTACGC
GCTCCTGTACTAATTTTATGGATAAAGTTATATACCTGAACTGAGCAACA
TCTCAGCAAGGTTCAAAACAATTACTGAGGTTTCAAAAAAAGGGAGTGAT
ACTGCACAATTTTTTCAGGCGGATATAGTCACCAGTGTACAGGAGTACAA
TAGCCAGGGCAATAGACCAGATCGTTAGACAAGACCTGCCCCACCTCCTT
CTGCGCGTTTTACTAGCTGCAAAGCTCAGCAATAAGCGACTAGGGGCATC
CATCGAAAAATCAAGTAACCAGGCTAAGTGAAAAAAAAATAAACCGCTCG
CTACCGCGCAAATTGGTCAAAACGAGAACTGGTGGAAGCCCTTGAATGCA
TGAAGCTGCGCGGAAATTGAAACGCGCCGTGGAGAGAGATGGCTTGGCGT
TGTCCGAGGTGCTGCGGGCAACCGTGAATGCTGAACGCAACAAGGCCGTT
GCCGCGAAGCAGGCCGCGGAAAACAAAGCGGCCAAGGCCGTCGCGCAGTC
GTCGGCTGCGGACAAAAAGCGATGGAGGATGCCATGACTGGTGCTGCTCA
TGCTCAGCAGTCGCTCCGCGCGGAACAGGAGAAAGGCGTGCGGCCAAGGC
AAACCCAGCGAGTTTAGCGGAGGAACTGCAGGGGTTTGCCGTATGCAGGA
GCTGAGAGTGGACACGGAGGCTATGGGCATGGCAGAAACCATGCCGGTGT
CAAACTTGCTGCAGTGAGGTGACCAGGTTGACGAAGCACATGGTGGGGTG
GTTGCAGCAAGATCTCGAGGCGGCAAAATTTTTCGCTTCAAAACAGCGGA
AGGGCTATGATAAGCAGAAGAAGCGGGTGAGATAAGAGGTTTTTCACTAT
AGGCAATCAGCTGCATCCCCAATTGCTGCTCTCAGTCTCGTTTGATGCTC
GGAATGGGTTTGGTTATGTCTGTGCTGTGTGTGTCGTCCTTCAATTGATT
GTGCCCTGTTAGCTGCGAATTTTTATGTTTGTAATGCTTTGATCATAAAA
TAAGCTACATGATCACATTCGGCAACACTGAAAATGTAGTTTATGCTTCG
AATCAGAATGTGTGTGACAGCAGTGTGTGTATGTGTGTGCATGCTGAACA
GCCTTTTTTGTAGACCATACCCGCCAAGCTTGTTCGTATATTGTGTGTGC
AGTATAGATGTCAGGTAGAACAGGCGTTTGCTGGCTGGTGGCCTATCTCT
TGTTTGTACACCCTCTCAGTGCCTGCGTTCTCTGTGTTGCGGGTTGTAAT
GATGTTGTGCTGGCTGTCTCAGTTGCGCTATGTCAGCTGCCGTATCTTTT
GTGTGGTTCAAGTTGTGTATTTTTTTGTCTTGGTCTAAACATAAATATAA
GGTACATTTACATTATTGTCGCAAAAAGGTACGTTATAGCAGTTGTGCCT
CCTGTGCTGCTACTACTCCACAACATGAGACCAAAATCAAACAAAATATC
CGTGACATGCATGGCAATATTGCAATGCTGGCAGTGCAATTATTGTGAAC
TCTATTCGCCACTTTTGACCGATTACGAAATCATCACCGCGTCTTTTCAC
TGACTTTCGACAGCCTGACTTGTCTGTTTTATTCCCGTGAATTTACCTAT
CATATGTAGGTTAAGCGGGCCGAGAGAGAGATGATGGCGCTCATAGCTGC
TGCTGCCGCAAAGCGCTTTATACTGAGTCCTGCTCCGCCGTTCGAGGGCC
AGCTCAACGTCAGAATATCAGAGAATCTAAAACCTAATGACCGGTTCGGT
GAGCGGACGGCAAGGATGTGTCAGTCACTCATTCAAAAGGGTATAGCGCT
CAAACAGATTGTACCTATCGTCCAGGGCGTGTTCTGGCACTCGCTCAACT
TCGACATAGCTACAGAAATCAACATAAAACTGGTCTCGAGCACCGTTAAA
ATCCTCGGCCTCGGCATCACTACGCTCGACAGCGACGAGCTCATCAAGAC
GATGCAGAGAGCGCCGTTGCTGACCATTGCGGAAGACGAGTTTATGCGAA
ATGGAAACCAAAAATACCCCCATCTTCGTGTCATTTTGGGACACCAAACG
ATACGCCCCCTGGTATGGTATGTTTCGCGTGGTGAGCATAGTGGATGAGA
CAGCGGAGACTCAAGCCCCCCTTTTTTACGAGATGGTCGTAGACATCCTG
AAGGTCACCCGGAACGGATTCTGTTTCTTTTGAGCGACAACACCGCGTCG
GTGTCGGCCGCGGTTGGGGGGTGCGTGACCTTGTTGCGAAGCAAGTTTAA
ATCTCTCTTCGGAGATCCCCTAGGACCCATGGCTGATTCTGAGAATCCCG
TAACGGAGACCGAGAGGGTCGGGGCTGAGGACAGTGGGTCACACCGGCGG
GGTTCAGGGTGGTGGCGGCGGCGTGGTGGGAGGGAGCGTGGTCGCGGCGG
GGCTCGAGGCGGCCGTCGCGGGAGAGGATGCGGGCGGGTCGGTTCGGGGT
AATGTCAGAGGCTGAATATCGTTGGGGTGTGTACAGCAACCGTTAGGCAG
GCGGACTCTGCTGTGGTTGTGGCGGGGGTGTCGCGTGAGATAAAGTAAGG
TGTAGTCATTTTTTTCAAAGGCGCGGGAGTACGCGTGGTTAAAAGCAAAC
GTTGAGTCTTTTTTTTGGGAGCGGGATAGATTATGATACGTGCTGGCGGA
GTCTTAAGATATAGATTTTATGTGCATCAGCAATGTCTGCGGCAACGTTG
CCGGAGAGTGCGAGTTGATAACAAAAGTGAAATTAAGGAGCTCCTTCAGG
CGACGTGTAGACTCCAGAGAGAAATCCGCCACCTCAACGAAACGCATCCC
AGGAGGCAGCCGCACTCGCTTTCCGTCGACCTCCTAGAAGCACCCTCCCA
CACCCCGTTTTGAATCATGAAAGCAGACTGCGCCCAGTAACCTTTGAACG
GAGTGGCGTATAGACACGACGGGGCCCATAACGTAAGCAACCACACAAGC
TGCAGCCACCGTGCCGAGGCTTTCTAGGCACCATTCCAGATCACCATCCA
TGTCATTTCCGCCGGCTTAGTGAACTTGTCCTTCCACACTACACCGAAAA
TTTTATTCACTAGATGCCTAAATTGACTGAATCTGAAAACGCTGCTGATT
CTGCTTGTTTTTATCAGAGCATTCCCAGCAGAGCAGCGACATGCGCGTTT
TTCCACCCCATGCCCAAAGGCCCCGTGAAGTAGATGTTGTCTAACCCTGC
CATGATTGCAATGTCGAGGATGTGTAAAGCGCAACCGAGGCGAAGAGCGT
AGATGATCGGCTAGGACTAAAAACTAGCTTATGGACAGCTGGAGACGCTG
CGGCACTGCTTGCCATCGTTACTTCGGCCGATGATCAATTGTGCGACAAG
CCTTTCCGCATTTTGCTATTTGCACCGTCTTTACCGTCAGCGGGTGTCGG
GAAAGCGCTGTGAGAGCCATGGTCTGGTGTGTTTGATCAAATGTTTCACA
CCCTGTACAGTCAGTCGCTCATAATGTTACTATATGCTTTGCGCTTCAAT
CATGGCCTGCTGGTGTCGTGGAACTCAAAACCGTACCAACTCCTGCAACA
AGCCTGTATAACTGGTGTCTCTGTGAGTTACAAAATAATTGCAGGACCGG
CTGTACTTTTTATCCTCGTAATCTTGTCGTGGGCGTTTGTAACAAATACT
TTTCGAAGGGGTTTTGGTCTGTTTTATCTAGCAGGGATTTTGTACGGATC
GTACACGGCCGGATGCCGGAAGAGTTAATACGCGCTATGCTATACTGGCG
CGCACTGGAATAAGACACCCCCCTCAGAGTACCGCCAAAACTGCAAACGG
TGTATCAAATTGTCCGCATGGTCCAACGCTAGCAGCTAGCGTTCACAGTC
GGTTCTTGACCGATTTCCGTACCACCGACTTTGCAGTATATCTATGCAGT
ACAACTAGCTGACGTAGTGTAGGGAACGGCCGTTCCATCCTTAGCCAGCT
ACCGTGCATGGAGGTTGAACGGCCGACCGCGAACAATTCCACGTTCTGGA
AGTATATCTCCTCCATTATCACTGTGTATGGCAAATTTTTATCCTTCCAT
TTATTCCTGTGGGCGCCAGGCTCCACAGACTCCACATCTACTCTTGACCT
GGAAAAAGCAGGGGAAAACAGGCGGATGACCTATGACGAGAAACGATGAC
TGGATATAGAACACTATGTTTATGTTCGCATGACTTTGTAACTTGATTTT
AAGATGAAATCTAGCTTTTCTAATGCAATATATGCGGAAAATTGCTCTCA
GCGCTCAAGAGGGCTTTAAAAAATGAGACTCAAATCATTTGTACGTTACG
TTTCAACCCCCAAGCGAATTAACGCTTATTCGTTTTCGACTTCGATTTCA
ACGTATTTATTGACGCTTCTGTTTTTGTTGAAGACCTGTGTAGTAACTTT
GTCCTGAACAAACCTGACACGGCTCGAGTGAAAAAGGTGGGAGGCGCCAT
CCATGTGATTATTGTTATTTTCCATTTTTTTAATTGTCCTACTTGCTTTC
TGTTTTTCTCCGTCCATTTTCCTATAATCCCTCAGCATGAACGCCCCTGT
GATGGTAGATATCGAGAGCGAAACAGATCCATTGAAGATCGCGATGAAAG
AGCTTCGGGAAAGGAAAATCCCCATCAAGATTCGAAGATATCTGCCGGAT
GGAAGCCACGAGGACTGGGCAATCGAAGAGCTTATCATCGACTAGAAGCG
TTGTGCATCATTCCTGTTGGTCTTGAGTGACGATTGAAAGTTCTGCAGTA
GTGCTATACCTCAGCTCCCGCACACTGTTTATTTCCGTGCACCAGAGGTG
TTGGTAGTTGGGCAGTCGAAGCGATGTGGCTTGTGAAAGGGCGTTGTATG
CCTGAACAGTGAAACTGCCCCCTGCGGTATGTCCATAGGAAGGAGGGGTT
GTGTTGGAGGCAGAGATGATGTCTCGTGGGTTGTAGTGCAGCTATCTTTT
CCCTTTGTGCAGTAAATTCAGGTGCATGCAGCACAGGACGGCCCATTGCT
TGGCAGTAGGGTGTCAGGTTGTTTTGGTAAATCTACCGTGCGCGTTAGTC
TCAGGTTTGCACCCGTTGGGGTGGGTAACACGGTGCAAGCATGTATTCAC
CATCCCGCGGTTCCACAGAATGTTGGTATATATGTTTCTGTAGCTGTCCA
GCTCCGCATTAAGCTATCTACATGGGGAAGTAACACGTCATTGTGTGTCT
CCTTTCGAGGTCCGTTCTCATGTCTTGGGGGCTATCCCTCGCTTAACCGA
GGACCTAGAGCATTGTTGGTTCTGTGCCCCTGCACTGCACGAGTCCAAAA
GCGCATTTTCAAGCGGTTCGCATT
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Coding sequence (CDS) from alignment at H-paniculata_contig1571:238..7411+

>mRNA_H-paniculata_contig1571.3311.1 ID=mRNA_H-paniculata_contig1571.3311.1|Name=mRNA_H-paniculata_contig1571.3311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig1571:238..7411+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGACAATGAGGCAAATTACGACGGGGCTGATGACGGGGATGCAGC
GTACGATGTCTTCGCCCAGGAAGATGACGAGCCGCAAATGGATGAGGAGC
AAGTGGAGGAGACACAAGATGCCGATATGGAGATCGTGGATTCCGGGGAT
GTGTCGGGCGCCGGGGCGCTTAGAGCTGCCGATGATAGAATTACCACCAA
ATACATGACGAAGTACGAGCGAGCGCGAATACTGGGGACTCGGGCGTTGC
AGATAAGATGTCTGACAATGAGGCAAATTACGACGGGGCTGATGACGGGG
ATGCAGCGTACGATGTCTTCGCCCAGGAAGATGACGAGCCGCAAATGGAT
GAGGAGCAAGTGGAGGAGACACAAGATGCCGATATGGAGATCGTGGATTC
CGGGGATGTGTCGGGCGCCGGGGCGCTTAGAGCTGCCGATGATAGAATTA
CCACCAAATACATGACGAAGTACGAGCGAGCGCGAATACTGGGGACTCGG
GCGTTGCAGATAAGCATGAACGCCCCTGTGATGGTAGATATCGAGAGCGA
AACAGATCCATTGAAGATCGCGATGAAAGAGCTTCGGGAAAGGAAAATCC
CCATCAAGATTCGAAGATATCTGCCGGATGGAAGCCACGAGGACTGGGCA
ATCGAAGAGCTTATCATCGACTAGCATGAACGCCCCTGTGATGGTAGATA
TCGAGAGCGAAACAGATCCATTGAAGATCGCGATGAAAGAGCTTCGGGAA
AGGAAAATCCCCATCAAGATTCGAAGATATCTGCCGGATGGAAGCCACGA
GGACTGGGCAATCGAAGAGCTTATCATCGACTAG
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