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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1429 |
| Cds size | 789 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1571.3314.1 >prot_H-paniculata_contig1571.3314.1 ID=prot_H-paniculata_contig1571.3314.1|Name=mRNA_H-paniculata_contig1571.3314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MIPLLWHAEPRSSIVVRMGVCKQASAFAGMGSDSDSDSDGGAPVAKVAVA
APAKGKGKGKGKGGRKGMGGNGGKGTAADDDLDALMAEFGEGGDGAAKGK
STTKAAAASQPVAAVAPMEDPAAAAAAFLAQMGAGGDEPKKDNKKKKKKK
KGGGGDKKDEEEEKKPKQTAAGRALAERLARQREEEERIRKLEEEEAKRI
AEEEAREEAARKAEEEEKARKRAKAKEKLERKKKEGTYKTKKQKEQEARA
KAARETMLAAGLE back to topmRNA from alignment at H-paniculata_contig1571:17832..25344+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1571.3314.1 ID=mRNA_H-paniculata_contig1571.3314.1|Name=mRNA_H-paniculata_contig1571.3314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7513bp|location=Sequence derived from alignment at H-paniculata_contig1571:17832..25344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTTTCTTGCGGACACCAAGCAAGGCGCTAGATTCTTGCATGCGTTCAAC
TGCATGCGTTCAACTGCATGCGTATGTTTTTGCTATATGTACAGCAGTAT
CAACAGGTCGATACCCATAGAGTACTGCATCGTTCACGTGCATGCCATTC
CTTTACGCCCACTGCAATCGCTGACGGCACAAATACAGTCTTGTTGAAAT
GCATCTTCAAAACAACCATCAGTGCACATCCTACGAATCGTCTGTCAAGC
TACTGCACGAAAGCACCATACTTCTCGCAAGTTGTGGATGTCGTTCGTCG
ACTGACTACGGAGTAAGTAGCTCGGTTAGCCCTGTCTGCAGCTGAAGGGC
CTGGGTGGGAGAGTTGTGGTGGGTAGGTATATGGAGTGTACCGATGACGT
TCTGCCACTTCCCTTATTTTGTATTTGTTCCGTCTTAATCTTGTTTCTTG
CCACACAAGGAAGGAGAACTACTATTATAGTAAACTGCAGACAAAATCTC
CACAGTGCAGCACCGTTCTAACATCCTTCAGTCTCTGCCGAGACAGCAAC
AATTTCATTCAGCACCCCATTGAAACCCATCTCGGTCTAGTCAAGTAGTC
CACCGAACAGTAAAATAATCGAATAATCCCGATTGAGTTATGATCCCATT
GTTGTGGCATGCTGAACCTAGATCATCCATTGTCGTGCGGATGGGGGTAT
GTAAACAGGCATCTGCCTTTGCAGGAATGGGGAGCGATTCGGACAGCGAC
TCCGACGGTGGAGCTCCGGTTGCGAAGGTTGCTGTGGCTGCGCCTGCCAA
GGTAATAGCTGTGTGTTGTGACACGAGTGAGAGTGGAGCGCCAAGTTGTT
AGCTGTGCTGTAATGGTTGGAGTTTCGTTCGTGTAGGGTGTGGTGGTGCT
CCTGCTCATGTTTTCACCCGGCGCTCGACGAGCACGCCTTGTACCGGTGC
CACGTTCGTAGAGCTCCTTGTGGCTGTGGTGGGAGTATTAAATAATAACC
CCGCGTTTCCACAGTGTTGTCTTTTTGTTTGGAAATGCTGTACAAGGCAT
TTTTGTGCTGTCTGAAATTTGAGGAATTTTCCTGGGATTGGCCCTAGGGA
TAAAACGCAGCACAAAGCAGCTTCTGGGTAGTGCAGCATCACAAGCCAAC
TGCGGCAATTTTCTCCTGGCTACCGGTCATATTTCAATCTTGAATCCTCC
TCATACGGCGGGTCACCTGCCTGACTATCTTAGTCGGTCACGTGTGACGT
GTGGTTAGGTGGACCTTTGCTGGTAAGAAGCGGCTGTCCTATAGGGTGTT
CATATCCGTTGTTCCGTGATACGATGGCATGCTGTACGAGTCGGCTACTG
CAAAGGTTGCTTGATTTGTTCACATGCTTCCTCCAGCGCGCGATCAGTCT
GAATAGCGCTAGATACAACCGGAAATTGCAATGGCACTGTAACATGATCA
ACCAGCCCTCTCTTGAGAGTAAGAGCAAGCTGTGTCTCTTTCGCTGCGAA
ACTAAATTACAATTGATATCCTGCCCGGATATCACCACTCCAACTTGTGT
TTGTGATACACGGCGACTAAAAAAATATGTCCAGGGCAAGGGCAAGGGCA
AAGGCAAAGGCGGCAGGAAAGGGATGGGCGGGAACGGAGGGAAAGGTACT
GCGGCCGACGACGACCTGGATGCCCTAATGGCCGAATTTGGGGAGGGCGG
TGACGGTGCTGCCAAAGGGAAGAGCACGGTGCGGAAGGAAGGAAGGAAGG
AAGGGTGGTTGTTTTGAACGAAGTTGCACCCCTGGAACGAACAAGAACAA
TTGATGAAAATATTAGCGCCGGAAAATTACAAAGAAATGAGTGATCTCCT
GCACAGGTTTATCTTGAGAGCAAGCACGAATTAGTCTATTTGATTTGATT
TGATTCGATTTGATTTGATTTGATTTGATTTGATTTGATTTGATTTGACT
AATCGTTGTGAAATGAATAGATGAAGGAGTCAACAGTTTATTTCATGTGC
TCGCATATGTTGAACCAGTAGTGAATCCTTCTTGAATTCTTCGCGAGTGC
TCTGTCCACATATTCACCATTCGTATTCGTCCAGGGTGTGTAGAAGTTGC
AACCTTATAGAACCGGTCAGGTAAAGGCTTTCGATAACAATAAAAGCAGA
AAATATGCAAACTTAGAGCGTGACAACAACTGTAAAATAATTATGAGATA
CGCTCAGTAATTCGATAGTACTCGAGTTAAGTGAGTTAATCCACTAACTG
ACCTAATTCAGGGACCGGGGGGGAAAGGACTAGAACCTAACGGGCTTGCA
ACTTCCACCCTAGACCCTTCAGGGTGCGATACTCGTCTAAACATCGTTCA
AAGGTTTACGTCCGATTCGTGTTGAAAAACACCATTTTTTCAAATTTCAA
GGGAGATGCCCACAAGCAGATGTGATTTAACCTGTTTTGTTCTATTGTTT
AGAAAATGTCCCTAAAGCAGATGCCAAGAAGCAGATCTCACAGGGCTACG
CCCCTAAAAGTGTTACAACGTAACATGTGTTTTGCGATGCGGTTCAGGAA
GCGATTTCCGAATTATGTCGGGAAGCTGGTTTATATATGTTTTTATTGTG
CCAACATCTTCGGGGGACTTTTGAAACATGACCGTGTGGAAGGTAGTGAT
GTTGAACACGCAGCACAATGACCTCAAACACGTAGTTGGAGCGGGGTGTC
CAAAATCGTCTTTACCTGTTGTCTAGTTTCAAGCAGTTGGAAAGTCTGCT
CATCTTTGTTATTTTAATATAGTGTTCGGTCACGTGACTGTTTTCATCAA
TCAGTCCCGTCAGTCACTTGTTTGCTCTCCGTTTCTTAGCTTACGCAGAC
TGGTATGCCTCACCATGTCGCGTCGCAAGGCGTCTACCCACGAGAACTGA
TCCTTGGATCGGTTCTAGAAGTGATGGTGTTACCTTTGCGCGTGCAATCC
CCCGTGATTAGATTATCTTGTAGACGAAGGAGAACAGACTAAAACTAATA
CTAAATTGAAATAATGTGCCTTAGCCCTCACATCACCGGAACGTGCGCAT
AGGACTGCCCTGAACCATCTCGAGAAAAGGATGACTATTGGCGCGCATTG
GTCACTCATAAGGCCCACGCTAAATCTGAATATTTCATTCTTATCTCTCG
TCCTACACACAACCTTAGCTGCTTGCTGAGTGTAGTATCAACCATTTATA
CCACTGCCCTGCCCTCGGTTCGTGTGAATCAATGACTTGCGAAGGGCAAC
GAAGCTGGATAAATAATACATGTACTTGCCCAGCGATGAGAAGATGTAAG
ATTCTCATCAAGCCTTGGGGTCGTGGGCCTGCTGTGCGATGAGCTTTGTC
TTCCATTTGGTCCACCCGTTTATATCCTCAGTTCCATACCTGTTTTAGCG
TCGTATCGGCTCTGTCGTGTATCTTACAATTCACCTGTATTTATGAAAGT
TGATACCGCACAGGTACGAATGAAGATTTTTGAACTGGTTCGTTGAACCA
ATTAGCTCACTAGCAGGGGAAGATTCGAACTAGTTTCAGTTATCAGTTTT
CGCCACTCAAACTCGAGGCAAAGCTGCCAGGCGACCGCGGAAGCAGGAAT
AATACGCCATTTAGATCCCACGACCCTTGAAAATCATGTTGAATTCCAGC
CTTAGCTTGGGCGACATACTGGAGAGCTTCATTGGGCGAAACCGTGGGAA
AATATAGATGATGACCAAATGGTGGATTCATTCAACATTTTGACATTTTA
AGCGTTTGGATTGATACCTTAGTAGACCCTGGTTAGGGCTTGGATGACCT
AATATCCAAGTATGTAAAAACGACGTTGCTCCTGGGGTGGAGGCACAAGC
GTGACTTGGTAATATGATTCATGCAGACTGTGACTTGGTATACAAGTGGT
TGATCACCTTGTGGTGCTTGACATTAAATCGACGCATGTAACAGCTTGAC
TCTGGGTTGGTTGGCTTCATCCCTCGCTGGTTCTCGCCTCTTTTTCCTGT
GTTTCACCTGCTTTCAGACGAAGGCGGCCGCCGCATCTCAACCTGTTGCT
GCTGTTGCACCGATGGAAGATCCAGCCGCCGCTGCGGCGGCATTCTTAGC
TCAGATGGGCGCCGGAGGTGACGAGCCGAAGAAAGACAACAAAAAAAAGA
AGAAGAAAAAAAAGGTACCGAGGCGGGGTAAATAGTTCATGGTGTATGTG
CGCGGGTTTGAAGGGAGGCGGGCATGACCTTTTAGTAACTAACGTGTTTC
ATTATTATTATTTATTATTATTATTTTTTTCTCTTGAGAAGAACAATCAG
TGTAATTTTCGATATGTTTCTGTTTTTCGGCTGAAAGTCATATATAACTC
TTAACTGGTAATATGTGTTGAACGTTTTGTGAGAATATATATAGGAATGT
TTAGTTGCTGTGCTTTGATTTCGTATTCATTATAATTAGGTTGTAACGAG
ATGGTCGTGGTCGTAGATTGGGAATATCTTTTTCGGGTCCGTACCTAAGT
AATTCCTGAACAGCGAATCTTGATACTAATGAAAGTATAGCGAGCCACTG
CGAGCGCAGGAAGTCCGTGGGTTGAGGACAGCACAAACTGCCCCATACAT
AGCTTTCCGTGGTCATACTATAGTGCTGTTAATAGCGTTGACGCAAAACG
AATTTCTTTTGTAAGTTTCGGTTTAGTCGTGTACACGTATTAATAACATC
TTGGACCCAACTCCACCTACACCAACGTGTCATCACGAGTCGAATTCCTT
GTTACAGCCAGTGACTTTGGGCATCTCTCACGAAAACTTTGAACTTCCAC
GAAGAATTCCGAATACACCAAGACGTTGTTGTGGGTGAACTGGAGCCAGT
ACGAGGAGCTAGCTCACTTTTTGCTGTATACGTTCACAGCGAAATTGACG
AAAAGAATTCACATTTTGCCCGCTCTATTGAGTGAAGGTATAGTGTGTGG
TACTGACTGTAGTGTGATACGCTGGGCTTTATTTTGCTGTGCTGTGCCGT
ACTGTATTCGATGTAGGGCACGACAACGAACCTTGGAGGAGACGTTACGT
ATCATGTCCTCATGTAGATTGAAGCTGTTTCGAGCAATATTTTTACCGCT
AGTAAACGGTGAAGCTGTTTCGATGGACCTCTAGAGAGAGGTGCTCTTTC
TTCTATTCGAAATAATCGCTTTTGGTACGGGTAGCAATGGGATTGGGGTA
AACAGTTACTTGAATGCTTTTTTCCGATCATGCTAAATAACTGTTTATCC
GAATCCTATTGGCCGCTGAGTAGATACCAGTTTATACAGTTCATGAACCA
ACAGGCGCGGTATATATATATATATTTATATATTTTTTAAAGCGATTGTG
TTCACCCTTTTGGAACGTCTTTTTGTTGATCTATTCGGGAAAGTAATGAA
GCTTGTCGTTTGCACCGGAAGCTTCGCAGTTGTTGCCGCTGCACGGATTG
GTAAGCTCGAAACCGTTCACTGATCAGCACCCCGAGCTTGTTTCCGAGTC
TCAGAACAGTGTCGGAAAAAGGATTCATGACTCCATTGCCGTTTCGGGGG
CATTGTTCCCTGCTATCGTCTTTTTCCAGGGAGGGGGTGGGGATAAGAAA
GACGAAGAGGAAGAAAAGAAGCCGAAACAGACTGCTGCTGGAAGGGCACT
CGCGGAGCGTTTGGCCAGGCAGCGGGAAGAGGAAGAAAGGATAAGGAAGT
TGGAGGTCAGTCGAGTCTACCCAACAGCACGATCAAGGAATCGTTTGGCT
CATCTGTCGGTACGGTATTCACTCAGCAAGGTTTGCCTCGAAGTAGATAT
CGCATGATTGCATAATGTGCTTCCGGAAATACTGTACATAATGTGCTTCC
GGAAATATCTCCCCCTCCTCCCCCTTGAATGAATACCAGATGGTTGAAGT
GTTGTATACGAAGAGCCGAGAGCAATCGTATGCAGGTTCAAAATGAAGAG
GGGTGAACGCTTTATTTTGCATGCCATCACCCAGCCTGCACATGCTGAAT
TCAGAGGAATATTTTCTTGTGTGTATTCGTGGGAGGGGTTAACAATGTGG
ACAGTGAAATCTGTCACTGGTGTAGTAGAGTCGTCTATCGGCATAGTTTT
CATCGAATACGTCGTGGATGCCATACATGGCGTGTGCCGTTGGCACCTTG
AAAGGTACCGTAGATCTTGTGTTAATTTACGGGCTAATATGTCGCATATC
AATCGTTATTTAATCATTATCCATCTGTTTTATAAAACCCTTGAAGAATA
AACATCATACGAGAAAGAGGTCCCATATGTCCGCATCGATGGAACTGCAT
GCGAACGTCGAAACGTCCCTTCTCTCTGATCGTGTTTGTGTTTTCGGTCA
CATTTAGATCGAACTGTTTGCCCTTATCATGACTCCATTTTGCGGGGAGT
TTTTTTGCCTCTGGTGGCGTTTTTATGAAGCCTCTCTCACCAGGCGAGAG
AGGAGGGATAATCATGTTTTGCGTGCCAAATATTTGTTACACCACTGGCT
ACACGTCCTCGGGGGAACCGAGCTTTCTTCCACTCAACGATGTATAATGG
GTATATCTCTTTTTGCTACGTTGATAAATGTGCCGTTTGAAATGTCTCGT
ATCTTTCTTGAAACTCTCATTGCCTTAGTTTTGGTAATTCCAGGATTCGA
AGGCCTCTCCATTGCTCGCCTTCTCGCTGTGCTTGCCTGACGCTGCGCAC
AACAGCGCATAGTTACGATATATATGTCTATATGATTTTTATCTCCGACT
TGTAGGCATGCCATGACTACGCTAGCAACGCACCTAGCTATATGACCGTC
TGCTCACTCACAGAGTTTGGAATTTATTGTCTGCCTCATGAAATGGCAAG
CTCAGCCATAGCGTGTGATATCATATGGCACTTTACGCTACTTTAAACGA
GTCATAAACCATCTGGTATTATACGTACATATATATATGCATGCAGGAGG
AAGAGGCTAAACGAATTGCGGAGGAGGAAGCTAGGGAAGAGGCGGCAAGG
AAGGCTGAAGAAGAGGAGAAAGCAAGGAAGCGCGCAAAAGCCAAGGAAAA
GGTGCAGCATGTACATATTTTTGTGATCTGCTGATAAGTGTGTGTATCCC
TTAACCGTGGTATCTCCCATACGCCAGGGGGGTGTGGGGTACCTCTCACC
CTCTACGGGAGGGAGTACGTCCTACTCTCTAGGGTGATGCGTTGCGTGTT
CTAAGCGGCCAAGAGAAAGCTCCGTGATCGTGCAGGGAGCAGGGTGTTTT
GGACCGTCAAGGTTTGCTTGCTCCTGTCTCCGCGTGCCGTAAATCGCGTT
TGGATTCTATGAACAGTAATTAAATAATTTTTTCCGAACGATGGGAATGA
ATTTGCGTGGTCCTGTGCTCGCGGCATGTCTCGGTCGGTTGCGGTCATGT
TCCACTAGCTTGAGCGCAAAAAGAAGGAGGGGACCTACAAGACCAAGAAG
CAGAAGGAGCAGGAGGCAAGAGCGAAGGCTGCGAGGGAAACCATGCTTGC
CGCTGGGCTAGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1571:17832..25344+ >mRNA_H-paniculata_contig1571.3314.1 ID=mRNA_H-paniculata_contig1571.3314.1|Name=mRNA_H-paniculata_contig1571.3314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig1571:17832..25344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCCCATTGTTGTGGCATGCTGAACCTAGATCATCCATTGTCGTGCG
GATGGGGGTATGTAAACAGGCATCTGCCTTTGCAGGAATGGGGAGCGATT
CGGACAGCGACTCCGACGGTGGAGCTCCGGTTGCGAAGGTTGCTGTGGCT
GCGCCTGCCAAGATGATCCCATTGTTGTGGCATGCTGAACCTAGATCATC
CATTGTCGTGCGGATGGGGGTATGTAAACAGGCATCTGCCTTTGCAGGAA
TGGGGAGCGATTCGGACAGCGACTCCGACGGTGGAGCTCCGGTTGCGAAG
GTTGCTGTGGCTGCGCCTGCCAAGGGCAAGGGCAAGGGCAAAGGCAAAGG
CGGCAGGAAAGGGATGGGCGGGAACGGAGGGAAAGGTACTGCGGCCGACG
ACGACCTGGATGCCCTAATGGCCGAATTTGGGGAGGGCGGTGACGGTGCT
GCCAAAGGGAAGAGCACGGGCAAGGGCAAGGGCAAAGGCAAAGGCGGCAG
GAAAGGGATGGGCGGGAACGGAGGGAAAGGTACTGCGGCCGACGACGACC
TGGATGCCCTAATGGCCGAATTTGGGGAGGGCGGTGACGGTGCTGCCAAA
GGGAAGAGCACGACGAAGGCGGCCGCCGCATCTCAACCTGTTGCTGCTGT
TGCACCGATGGAAGATCCAGCCGCCGCTGCGGCGGCATTCTTAGCTCAGA
TGGGCGCCGGAGGTGACGAGCCGAAGAAAGACAACAAAAAAAAGAAGAAG
AAAAAAAAGACGAAGGCGGCCGCCGCATCTCAACCTGTTGCTGCTGTTGC
ACCGATGGAAGATCCAGCCGCCGCTGCGGCGGCATTCTTAGCTCAGATGG
GCGCCGGAGGTGACGAGCCGAAGAAAGACAACAAAAAAAAGAAGAAGAAA
AAAAAGGGAGGGGGTGGGGATAAGAAAGACGAAGAGGAAGAAAAGAAGCC
GAAACAGACTGCTGCTGGAAGGGCACTCGCGGAGCGTTTGGCCAGGCAGC
GGGAAGAGGAAGAAAGGATAAGGAAGTTGGAGGGAGGGGGTGGGGATAAG
AAAGACGAAGAGGAAGAAAAGAAGCCGAAACAGACTGCTGCTGGAAGGGC
ACTCGCGGAGCGTTTGGCCAGGCAGCGGGAAGAGGAAGAAAGGATAAGGA
AGTTGGAGGAGGAAGAGGCTAAACGAATTGCGGAGGAGGAAGCTAGGGAA
GAGGCGGCAAGGAAGGCTGAAGAAGAGGAGAAAGCAAGGAAGCGCGCAAA
AGCCAAGGAAAAGGAGGAAGAGGCTAAACGAATTGCGGAGGAGGAAGCTA
GGGAAGAGGCGGCAAGGAAGGCTGAAGAAGAGGAGAAAGCAAGGAAGCGC
GCAAAAGCCAAGGAAAAGCTTGAGCGCAAAAAGAAGGAGGGGACCTACAA
GACCAAGAAGCAGAAGGAGCAGGAGGCAAGAGCGAAGGCTGCGAGGGAAA
CCATGCTTGCCGCTGGGCTAGAACTTGAGCGCAAAAAGAAGGAGGGGACC
TACAAGACCAAGAAGCAGAAGGAGCAGGAGGCAAGAGCGAAGGCTGCGAG
GGAAACCATGCTTGCCGCTGGGCTAGAA back to top
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