mRNA_H-paniculata_contig157.3304.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: D8LE93_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE93_ECTSI) HSP 1 Score: 229 bits (585), Expect = 4.820e-69 Identity = 126/156 (80.77%), Postives = 135/156 (86.54%), Query Frame = 3
Query: 60 MSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDSALANMGGKKKKXXLKKSKSEKDIG-GEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLARTEGG 524
MSVQLLGKRELKRL SVANDGAGAGY+ FAKGMMAKMGWAEGQGLGK+ QGRSTYVQVKKKDDN+GLGKE AQQN VNDQWYFNAFDSALANMGGKKKKXX + G G+ + + +MYDKMFKATGGARMGMRARASQNGKL+RTEGG
Sbjct: 1 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGG 156
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A835Z8F6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F6_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.130e-34 Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 3
Query: 72 LLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDSALANMGGKKKKXXLK-KSKSEKDIGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLART 515
+LGKR LK LG+ AND AG+GY+SF++ MM KMGW EGQGLGKD QG ++Y++VK+K+D+AGLG+E ++ +QWYFNAF+ A+A K K K+K EK E ++ ++Y +MF+ +GGARMGMRARASQ K RT
Sbjct: 4 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREV----NEATIYQEMFEKSGGARMGMRARASQKAKWERT 148
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A7S3M264_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M264_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.830e-22 Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 3
Query: 57 DMSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEG--AQQNTVNDQWYFNAFDSALANMGGKKKKXXLKKSKSEKD---IGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLARTE 518
D+S+ LL K+ + ++GS N+ AG+ +SFA M KMGW EG+GLGK G S ++ + K+++++GLG E A+ ++ W+ +A+ S L + K KKSKS + GE D YD +FKATGGAR+GMRARA Q GKL RTE
Sbjct: 5 DISL-LLNKKTVMKMGSQMNENAGSKPSSFALKQMEKMGWTEGKGLGKTESGISKHITIVKREESSGLGSEAVDARAAAASENWWHDAYSSNLKLI----KMKHGKKSKSSXXXXXLDGEXXEKNDAPPSYDDLFKATGGARLGMRARADQKGKLKRTE 158
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A7S2V0B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B5_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 5.120e-21 Identity = 63/165 (38.18%), Postives = 97/165 (58.79%), Query Frame = 3
Query: 66 VQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDS-----ALANMGGKKKKXXLKKSKSEKDIGGEAGSNCDQ---------NSMYDKMFKATGGARMGMRARASQNGKLARTE 518
+Q++GK+++K + + ++ +G+ + FA+ M KMGW EG GLGK+ GR+ +V+V K++++ GLG E ++ +V+DQW+ NAF+S A AN KKK XX ++ ++FKATGGARMGMRARA+Q+ K RTE
Sbjct: 1 MQVVGKKQMKWMSTNLSEASGSAVSDFARRQMEKMGWKEGMGLGKNSDGRTEHVRVVKREESMGLGVEQKERESVSDQWWLNAFESVSNNLAKANTDNKKKXXXXXXXXXXXXXXXXXXXXXXXXXXPDAAAGQEVWQELFKATGGARMGMRARATQSAKWERTE 165
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A7R9YDY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDY2_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.950e-21 Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 3
Query: 72 LLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQ-QNTVNDQWYFNAFDSALANMGGKKKKXXLKKSKSEKDIGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLARTEGG 524
L+ K L+ L N+ +G + FA+ + KMGW+EG+GLGK G ++V+VKK++DNAGLG E ++ Q V W+ +AF A+ +GGK+ K + +++FKATGGAR+GMRARA QNGK AR E G
Sbjct: 4 LVSKDTLRGLRGKLNESVASGPSDFARRQLMKMGWSEGKGLGKREHGTVSHVRVKKREDNAGLGTETSRLQAIVAGDWWTDAFAGAVQKLGGKRAK---------------------REPTMEELFKATGGARLGMRARAKQNGKWARAERG 134
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A196SBI7_BLAHN (G patch domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBI7_BLAHN) HSP 1 Score: 94.0 bits (232), Expect = 2.080e-18 Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = 3
Query: 54 SDMSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDSALANMGGKKKKXXLKKSKSEKDIGGEAGSNCDQNSMYD-KMFKATGGARMGMRARASQNGKLARTE 518
S + LGKR++ L S+ ND A +++ K +M KMGW++G+GLGKD G + +KKKD+ G+G + Q N ND W+FNA+DSA KK S SN Q D ++F A G R+GMRAR SQ GK R E
Sbjct: 3 SGTDIHRLGKRQMDYLASMQNDVATEATSAYGKKLMQKMGWSDGEGLGKDGTGIKKSIVIKKKDNEEGVGFKEQQSNRWNDTWWFNAYDSAA------KKSGRSSTSXXXXXXXXXXSSNGKQKVYTDAELFAACKGRRLGMRARKSQKGKWERCE 152
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A1W0A5E1_9STRA (G-patch domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5E1_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.900e-18 Identity = 55/150 (36.67%), Postives = 87/150 (58.00%), Query Frame = 3
Query: 63 SVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDSALANMGGKKKKXXLKKSKSEKDIGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLAR 512
+V ++GK+ L +LG +AN+ A + +SFAK MAKMGW EG+GLGK QG +T+++VK++++NAG+G E A+ ++QW++N +D + + + XX + +++F ATGG G RA S GKL R
Sbjct: 5 TVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWTEGKGLGKQEQGIATHIKVKRREENAGVGTEAAKTEEQSNQWWYNVYDKMASKIVVEASDXXXXXXXXXXXXXXXXSRDLADEPTDEQLFAATGGRLFGRRAYGSCKGKLMR 154
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A7S2DWI2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWI2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.040e-18 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 3
Query: 60 MSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQ--WYFNAFDSALANMG-GKKKKXXLKKSKSEKDIGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLARTE 518
M ++LL K + LG N+GA + + FA M KMGW +G GLGKD G + +++++KKD GLG +++ W+ N F + L + G+KKK +K S N + +D++F ATGGAR+GMRAR SQNGK+ R E
Sbjct: 1 MDLKLLSKSTVNLLGCKQNEGAASAVSDFALRQMEKMGWKKGMGLGKDENGIADHIRIEKKDGKDGLGMADQERSDEAKAAGWWNNGFANTLDKIQIGEKKKSKKRKRPS----------NSTEVPSFDELFAATGGARLGMRARRSQNGKIRRAE 146
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A067CL68_SAPPC (G-patch domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CL68_SAPPC) HSP 1 Score: 91.3 bits (225), Expect = 9.690e-18 Identity = 62/183 (33.88%), Postives = 103/183 (56.28%), Query Frame = 3
Query: 54 SDMSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFDSALANM--------------GGKKKKXXLKKSKSEKDIGGEAGSNCDQNSMYDKMFKATGGARMGMRARASQNGKLARTEGGTAVVAEGNETPA 560
S ++V ++GK+ L +LG +AN+ A + +SFAK MAKMGW++G+GLGK+ QG +T+++VK++++N G+G E A+ ++QW++N ++ + + XX K+S++E D+ + +++F ATGG G RA S GKL R T V + NE A
Sbjct: 2 SVVTVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWSQGKGLGKEEQGIATHIKVKRREENTGVGTEAAKTEEQSNQWWYNVYNKMASKIVVDAXXXXXXXXXXXXXXXXXXKKRSRAEMDVPTD-----------EQLFAATGGKLFGRRAYGSCKGKLMRDALQTKGVVDDNEEKA 173
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Match: A0A8K1CNH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNH9_PYTOL) HSP 1 Score: 87.4 bits (215), Expect = 3.620e-16 Identity = 38/89 (42.70%), Postives = 64/89 (71.91%), Query Frame = 3
Query: 54 SDMSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQGRSTYVQVKKKDDNAGLGKEGAQQNTVNDQWYFNAFD 320
++ +V L+GK+ + +LGS+ N+ A + ++FA+ M KMGW +G+GLGKD QG +TYV+VKK+++N G+G E + +QW++N +D
Sbjct: 5 AEPAVPLVGKKYMNKLGSMVNESAASEISAFARKQMEKMGWTDGKGLGKDEQGMTTYVRVKKREENMGVGGETVKVEQQQNQWWYNVYD 93 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig157.3304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig157.3304.1 >prot_H-paniculata_contig157.3304.1 ID=prot_H-paniculata_contig157.3304.1|Name=mRNA_H-paniculata_contig157.3304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp MSVQLLGKRELKRLGSVANDGAGAGYTSFAKGMMAKMGWAEGQGLGKDLQback to top mRNA from alignment at H-paniculata_contig157:29330..31959- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig157.3304.1 ID=mRNA_H-paniculata_contig157.3304.1|Name=mRNA_H-paniculata_contig157.3304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2630bp|location=Sequence derived from alignment at H-paniculata_contig157:29330..31959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig157:29330..31959- >mRNA_H-paniculata_contig157.3304.1 ID=mRNA_H-paniculata_contig157.3304.1|Name=mRNA_H-paniculata_contig157.3304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig157:29330..31959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |