mRNA_H-paniculata_contig157.3302.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 565 bits (1455), Expect = 8.180e-191 Identity = 306/536 (57.09%), Postives = 373/536 (69.59%), Query Frame = 1
Query: 358 PPLFRLIST-PSDGPGSGSVGLKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELPQFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLRQSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGT---------RPKHKGADLYKYGHMRVRGLLETEPR-----LLKDEHHHKVAFQFSSLASLTKDPNQWLMELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGG-EPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLS--YRIPPGKAVPLPLLPIPYLLPAPRYNFD----AGDKPWV--WDQNYAIPDKFGKMWTG 1893
PPL+RL+ST PSD +GSVGL DLLSG F ALL NYMVD ALL+ PRL VPV +VHGFKP T + +LR+QC ++ G+K +PELP++GT+HAKM++LKFP G+RV VLTANF+ DVT KSQGVWYQ+FP R S +C F+ L+ +L K+GGP +AFA +L +YDF ARVALVPSVPGT +P HKG DL+KYGHMRVR LL E LK E HKV Q SSLASLTK PN+WL E+L SFM +D + KK E S S A +L++ LR+VWP++EA+R SS+GW AGGSI C T +M+GG + +M + +N P PELRPLLRKW+GNPAV+RT +APHIKSY+RYRE G E RVDGDEVAWFLL+SSNLSRSAWG+L+K S L +RSFEMG+MFLPSLL R G A+ FTCTPGEMGL QR PLS Y GK +PL LLP+PY+LPAPRY+FD A ++PWV DQN + D+ G+ W G
Sbjct: 80 PPLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQC-AVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKP-HKGRDLHKYGHMRVRALLAREKEDGTGAKLK-EGGHKVLCQISSLASLTKTPNRWLSEILASFMPLED----EGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLL-----RSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEAWQG 603
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: W2QLN8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QLN8_PHYPN) HSP 1 Score: 286 bits (733), Expect = 8.170e-85 Identity = 187/514 (36.38%), Postives = 257/514 (50.00%), Query Frame = 1
Query: 418 LKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLR-------------QSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEP-----RLLK----DEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
L DLL G F+ LLTNYM D+ L PRL VPV++VHG + + + +C S + P P LP +GTHH KM+V + VRV + TANF+ D K+QG+WYQ+F L+ + DFE LV YL LG PV F L+++DF++ARVALVPSVPG HKG D+ KYGH+R +L T RLLK + + QFSSL SL + +WL E SF+ K ++ ++ + L ++WP++E +RNS +GW +G SIPC +M +P L LRKW+ +HR PHIKSY R+ + GE +AW +++SSNLS++AWG L K QL++RS+E+G+MFLP LLG++ ++G+ T AA + G P LLP+PY P YN D+PWVWD PD FG +
Sbjct: 47 LSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER----DRQGMTKECREYSN-VTPVVPPLPIPYGTHHTKMLVALYSEKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLGAPVKLFCAELKRFDFSTARVALVPSVPGV---HKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGSLDE---KWLFGEFAESFLPGKK------------------IISSTSMPIQALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWKPPSELHRQNAMPHIKSYARFNPSDDGAGE-------LAWAIVTSSNLSKAAWGTLQKNKTQLMIRSYELGVMFLPPLLGRQ---RNGTPSRLVTIASKAAEHSDVAG----------------SDTQPTELLPLPYSFPLTTYN-PKNDEPWVWDLVRESPDIFGNAY 486
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN) HSP 1 Score: 284 bits (727), Expect = 4.140e-84 Identity = 187/505 (37.03%), Postives = 250/505 (49.50%), Query Frame = 1
Query: 418 LKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLR-------------QSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
L DLL G F+ LL NYM D+ L PRL+ VPV++VHG + + R N + P P LP +GTHH KM+V +P VRV + TANF+ D K+QG+WYQ+F L+ + DFE+ LV YL LG PV F L+++DF+SARVALVPSVPG HKG D+ KYGH+RVR LL+ D + + QFSSL SL + +WL E S + K STS + L ++WP +E +RNS +GW +G SIPC +M +P L LRKW +HR PHIKSY R+ + GE + W +++SSNLS++AWG L K Q ++RS+E+G+MFLP LLG+ + +G+S T AA + + P LLP+PY P YN D+PWVWD PD FG +
Sbjct: 47 LSDLLEGDFSRCLLANYMFDLPWLFTECPRLKEVPVVLVHGERDRQGMTKECRDYSN-----VTPVAPPLPIPYGTHHTKMLVALYPERVRVAIFTANFLSNDWNTKTQGLWYQDFGLKVLTDSDEEEKEAVARSSSDFEADLVHYLSSLGAPVKLFCGELKRFDFSSARVALVPSVPGV---HKGKDMEKYGHLRVRKLLKMYKIPPTD---NPLICQFSSLGSLDE---KWLFGEFAESLLPGKKH-----------ISSTSMPV-------QALHVIWPAVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWMPPAELHRQNAMPHIKSYARFNASEDKAGE-------LDWAIVTSSNLSKAAWGSLQKNKTQFMIRSYELGVMFLPPLLGRHSN--AGTSPRLVTIGSKAAEHSDVAEQ-------------------PTELLPLPYSFPLTTYN-PKNDEPWVWDLVREKPDIFGNAY 472
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 280 bits (716), Expect = 2.740e-82 Identity = 185/543 (34.07%), Postives = 263/543 (48.43%), Query Frame = 1
Query: 313 VESGEATNSDSVEKAPPLFRLISTPSDGPGSGSVGLKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLR----------------QSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
VE T SV+ L RL P + ++GL++L G +T+ LLTNYM D+ L + PRL VPV++VHG + + + + +C + P P LP +GTHH KM VL +P RV + TANF+ D K+QGVW+Q+F L+ Q+ DFE L++YL LG PV F + L ++DF++A VAL+PSVPG H G ++KYGH+RVR LL+ D H + QFSSL SL + +WL E S M G T A+ + + L ++WP++ +RNS +GW AG ++PC +M +P L LRKW A+HR PHIK+Y R+ +P+ DG V W +L+SSNLS++AWG K Q L+RS+E+G++FLPS +H + TP ++P L+P+PY P YN D+PWVWD PD +G +
Sbjct: 37 VEEVSVTEDASVDVLFRLTRLKDAP-ERHNRYAIGLQELFEGEYTQCLLTNYMYDLPWLFASCPRLHDVPVVLVHGER----DRHAMTQECKGYGN-VTPVAPYLPIPYGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKALGEDDASEEKKQHQKQAAVADFERDLIEYLSTLGTPVVTFCKELSRFDFSTATVALIPSVPGA---HTGKAMHKYGHLRVRALLKHFAVAPSD---HPLICQFSSLGSLDE---KWLFGEFAGSLMP----------------GPTQLASGGSTLPIKALHIIWPSVNDVRNSVEGWNAGRAVPCPLKNM------------------KPFLHKYLRKWTPPSALHRQNAMPHIKTYARF--------DPKRDGC-VDWAILTSSNLSKAAWGAYQKNQSQFLIRSYELGVLFLPS-----------------ASSHQHLSVVGTPAAN-------------TEDSIPTRLMPLPYAFPLTTYN-PKEDEPWVWDLVRDEPDVYGNCY 490
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.530e-81 Identity = 182/505 (36.04%), Postives = 252/505 (49.90%), Query Frame = 1
Query: 418 LKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLR---------------QSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYR-IPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFG 1878
L +LL G FT LLTNYM D+ L PRL VPV++VHG + + + +C S + P P LP +GTHH KM+V +P VRV + TANF+ D K+QGVW+Q+F L+ + DFE+ LV YL LG V F R L+++DF+SARVALVPSVPG HKG D+ KYGH+RVR LL+ D + + QFSS+ SL + +WL E SF+ G + + V + L ++WP++E +RNS +GW +G SIPC +M +P L +RKW +HR PHIKSY R+ + +A GE + W +++SSNLS++AWG L K Q ++RS+E+G+MFLP LL + C P + + + + ++ P LLP+PY P YN D+PWVWD PD FG
Sbjct: 75 LNELLEGEFTRCLLTNYMYDLPWLFAECPRLRDVPVLLVHGER----DRQGMMKECREYSN-VTPVAPPLPIAYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGVWFQDFGLKVLDDGEEEKEAVAPNSAAINDFEADLVHYLSSLGAQVKIFCRELKRFDFSSARVALVPSVPGY---HKGKDMEKYGHLRVRKLLKMYQVPPTD---NPLICQFSSMGSLDE---KWLFGEFAESFLP----------------GKKNISPTPMPV--QALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYIRKWTPPEELHRQNAMPHIKSYARFNPSDEAVGE-------LDWAIVTSSNLSKAAWGALQKNKTQFMIRSYELGVMFLPQLLKPPGN--------------------CPPVRLVTLGSKAAGHSGVAVSESQPTALLPLPYGFPLTTYN-PKKDEPWVWDLVRDSPDIFG 501
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM) HSP 1 Score: 276 bits (705), Expect = 1.180e-80 Identity = 187/516 (36.24%), Postives = 249/516 (48.26%), Query Frame = 1
Query: 418 LKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLRQSPTC-----------------DFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQS------GSSGGTG-TGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
L DLL G FT LLTNYM D+ L PRL VPV++VHG + R N + P P LP FGTHH KM+V +P VRV + TANF+ D K+QGVW+Q+F L+ DFE LV YL LG V F L+++DF+ A VAL+PSVPG HKG D+ +YGH+RVR LL+T D + + QFSSL SL + +WL E SF+ G + + ++ V + L ++WP++E +RNS +GW +G SIPC +M +P L LRKW +HR PHIKSY R+ + +A G + W +++SSNLS++AWG L K Q +VRS+E+G+MFLP LL ++ S GS G +G D + P E LLP+PY P YN D+PWVWD PD FG +
Sbjct: 58 LHDLLEGEFTRCLLTNYMYDLPWLFSECPRLRQVPVLLVHGERDRQGMTKKCREYAN-----VTPVAPPLPIPFGTHHTKMLVALYPDKVRVAIFTANFLSGDWNTKTQGVWFQDFSLKILDDSEXXXXXXXXTASSRGGNDFEEDLVHYLSSLGAQVKLFCGELKRFDFSRAHVALIPSVPGV---HKGKDMERYGHLRVRKLLKTFNVPQTD---NPLICQFSSLGSLDE---KWLFGEFAESFLP----------------GKKNISASSMPV--QALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWTPPSVLHRQNAMPHIKSYARFDPSDEAAGA-------LDWAIVTSSNLSKAAWGTLQKKKTQFMVRSYELGVMFLPPLLAHQNGGTSPHLVTIGSKAAAGHSGVEDFESSEKQPKE----------------------LLPLPYGFPLTTYN-PKQDEPWVWDLVRDSPDIFGNAY 493
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.560e-77 Identity = 189/531 (35.59%), Postives = 262/531 (49.34%), Query Frame = 1
Query: 364 LFRLISTPSDGPGSGSVGLKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPL-------------------RQSPTCDFESTLVDYLEKLGGPVTAFA-RSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLK-DEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
L RL P D ++GL++LL G F LL+NYMVD+ LL PRL VPV++VHG + + + T C ++ + P LP +GTHHAKM+V +P VRV + TANF+ D K+QGVW+Q+F L R DFE+ LV YL LG V AF R + ++DF+ A VAL+PSVPG HKG+D+ K+GH+RVR LL+ LLK + + QFSS+ SL + +WL E S + +G G T T+ + L L+WP++E +RNS++GW AG ++PC +M +P L LRKW +HR PHIK+Y R+ + + W +L+SSNLS++AWG L K Q L+RS+E+G++FLP LL K S +S G+ AA GE + LP+PY P Y+ D+PWVWD PD FG +
Sbjct: 304 LTRLRGAP-DAHNQHAMGLRELLDGAFESVLLSNYMVDVDWLLGECPRLRDVPVLLVHGERDRGA----MLTACRALAN-VTLVAPPLPIAYGTHHAKMLVAVYPEKVRVAIFTANFIAIDWENKTQGVWFQDFGLKTLSDDAEADAVGSAVTVERGPAELDFEADLVAYLSALGARVAAFCKRHVARFDFSGANVALIPSVPGV---HKGSDMEKFGHLRVRKLLQ----LLKVPPSDNPLICQFSSMGSLDE---KWLFGEFAQSLL-------------KGKKGITGTSAPV-----QALHLIWPSVEDVRNSTEGWNAGRAVPCPLKNM------------------KPFLHKYLRKWAPPERLHRKNAMPHIKTYARFEAPTSGRDDDDAAAGTLDWAILTSSNLSKAAWGALQKGDSQFLIRSYELGVLFLPQLLRKTSGSDSSASKLVVLGSK--AADRSRAGEAPFV-------------------LPLPYSFPLKTYDPKV-DEPWVWDLVREDPDVFGNCY 760
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 277 bits (708), Expect = 2.070e-76 Identity = 189/516 (36.63%), Postives = 250/516 (48.45%), Query Frame = 1
Query: 409 SVGLKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLRQ---------------------SPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
+VGL DLLSG F+ LLTNYM D+A L PRL VPV++VHG + + +D R N + P LP +GTHH KMMV+ + VRV + TANF+ D K+QGVW+Q+F L P DF+ LV+YL LG PV AF R L ++DF++A VALVPSVPG H GA KYGH+RVR +L+ D H + QFSSL SL + +WL E S M + T+T +K L +VWP+++ +RNS +GW AG ++PC +M +P L LRKW A+HR PHIK+Y R+ +P G V W LL+SSNLS++AWG L K QL++RS+E+G++FLP L R G G + A + T LP+PY P Y+ A D+PWVWD PD FG +
Sbjct: 642 AVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLADVPVVLVHGERDREAMQHDCRGFTN-----VTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYLSTLGAPVVAFCRELERFDFSTATVALVPSVPGY---HTGAAKDKYGHLRVRRILQHFNVPRSD---HPLICQFSSLGSLDE---KWLFGEFAESLMPRP------------------LPTSTPMPIKS-LHIVWPSVDDVRNSIEGWHAGRAVPCPLKNM------------------KPFLHKYLRKWTPPAALHRQNAMPHIKTYARF--------DPSQPG-AVDWALLTSSNLSKAAWGALQKNGTQLMIRSYELGVLFLPQL----SSRSLGQFKVIGVDNNSAEVSSSTV------------------------YLPLPYGFPIKTYD-PARDEPWVWDLVREDPDVFGNCY 1068
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A0W8DNG8_PHYNI (HIT domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DNG8_PHYNI) HSP 1 Score: 261 bits (666), Expect = 2.240e-74 Identity = 184/553 (33.27%), Postives = 255/553 (46.11%), Query Frame = 1
Query: 418 LKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGND------------------------LRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLR-------------QSPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGAD--------------------LYKYGHMRVRGLLETEPRLLK----DEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDDRQSGSSGGTGTGTHDAAAFTCTPGEMGLIQRLPLSYRIPPGKAVPLPLLPIPYLLPAPRYNFDAGDKPWVWDQNYAIPDKFGKMW 1887
L DLL G F+ LLTNYM D+ L PRL VPV++VHG + +G D + +C S + P P LP +GTHH KM+V + VRV + TANF+ D K+QG+WYQ+F L+ + DFE LV YL LG PV F L+++DF++ARVALVPSVPG K KG + L +YG +R + LLK + + QFSSL SL + +WL E SF+ K ++ ++ + L ++WP++E +RNS +GW +G SIPC +M +P L LRKW+ +HR PHIKSY R+ + GE +AW +++SSNLS++AWG L K QL++RS+E+G+MFLP LLG++ ++G+ T AA + G P LLP+PY P YN D+PWVWD PD FG +
Sbjct: 68 LSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGERDR--QGYDVAYIPLKCQLMKLMNVLLILCRYRMTKECREYSN-VTPVVPPLPIPYGTHHTKMLVALYSEKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLGAPVKLFCAELKRFDFSTARVALVPSVPGVH-KGKGEEEALSSIIIRLLMLTFENLYLLNRYGEIRASPRTQASCSLLKMYKIPPTDNPLICQFSSLGSLDE---KWLFGEFAESFLPGKK------------------IISSTSMPIQALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWKPPSELHRQNAMPHIKSYARFNPSDDGAGE-------LAWAIVTSSNLSKAAWGTLQKNKTQLMIRSYELGVMFLPPLLGRQ---RNGTPSRLVTIASKAAEHSDVAG----------------SDTQPTELLPLPYSFPLTTYN-PKNDEPWVWDLVRESPDIFGNAY 550
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA) HSP 1 Score: 271 bits (694), Expect = 7.180e-74 Identity = 168/437 (38.44%), Postives = 232/437 (53.09%), Query Frame = 1
Query: 364 LFRLISTPSDGPGSGSVGLKDLLSGGFTEALLTNYMVDMALLLEAQPRLEYVPVIVVHGFKPNTSEGNDLRTQCNRISQGIKPYHPELP-QFGTHHAKMMVLKFPRGVRVVVLTANFVDQDVTGKSQGVWYQEFPLRQ------------SPTCDFESTLVDYLEKLGGPVTAFARSLRQYDFTSARVALVPSVPGTRPKHKGADLYKYGHMRVRGLLETEPRLLKDEHHHKVAFQFSSLASLTKDPNQWLM-ELLTSFMAQKDGEQQDWKKPEGGAGSTSTATATRNVLKERLRLVWPTIEAIRNSSKGWAAGGSIPCRTNDMFGGDFIRADMRRFEANDPRPELRPLLRKWQGNPAVHRTFNAPHIKSYVRYRETCKAGGEPRVDGDEVAWFLLSSSNLSRSAWGFLDKTSKQLLVRSFEMGIMFLPSLLGKEDD 1632
L RL + P D + GL DLL G FT LLTNYM D+ L PRL VPV++VHG + + R N S P LP +GTHH KM+V +P VRV + TANF+ D K+QG+WYQ+F L+ + +FE+ L YL LG PV F L+++DF++ARVALVP+VPG HKG D+ KYGH+RVR LL+ D + + QFSSL SL + +WL E SF+ G +ST+ T + L ++WP++E ++NS +GW++G SIPC +M +P L LRKW VHR PHIKSY R+ A GE + W +++SSNLS++AWG L K + Q ++RS+E+G++FLP LLG+ ++
Sbjct: 156 LTRLRNAP-DAHNLHAKGLNDLLEGDFTRCLLTNYMFDLPWLFAECPRLRDVPVLLVHGERDRQGMTKECREYANVTSVA-----PPLPIPYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVLADSEDEEKEAVAGASEFEADLAHYLSSLGAPVKVFCGELKRFDFSTARVALVPAVPGV---HKGKDMEKYGHLRVRKLLKMYKVPPTD---NPLICQFSSLGSLDE---KWLFGEFAESFLP-------------GKRNISSTSMPT-----QALHIIWPSVEDVQNSLEGWSSGRSIPCPLKNM------------------KPFLHKYLRKWTPPKEVHRQNAMPHIKSYARFSPNDDAAGE-------LDWAIVTSSNLSKAAWGSLQKNNTQFMIRSYELGVIFLPQLLGRHNN 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig157.3302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig157.3302.1 >prot_H-paniculata_contig157.3302.1 ID=prot_H-paniculata_contig157.3302.1|Name=mRNA_H-paniculata_contig157.3302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=626bp MSSFYDLTAGSEGSDNDDDDDILQAAINASLLDMNNQNSRTDASSAVQSEback to top mRNA from alignment at H-paniculata_contig157:17096..24957- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig157.3302.1 ID=mRNA_H-paniculata_contig157.3302.1|Name=mRNA_H-paniculata_contig157.3302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7862bp|location=Sequence derived from alignment at H-paniculata_contig157:17096..24957- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig157:17096..24957- >mRNA_H-paniculata_contig157.3302.1 ID=mRNA_H-paniculata_contig157.3302.1|Name=mRNA_H-paniculata_contig157.3302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3756bp|location=Sequence derived from alignment at H-paniculata_contig157:17096..24957- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |