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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 600 |
| Cds size | 306 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15698.3300.1 >prot_H-paniculata_contig15698.3300.1 ID=prot_H-paniculata_contig15698.3300.1|Name=mRNA_H-paniculata_contig15698.3300.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MSESKEDGRTKKGEGIPPESGSSVPTTASATNGKGGIESPTATNGKRKQQ
QVVEAEEDEDERADREYGDDGEEDDDDDDDDDDDEGVGGDGDRAGGLEED
GD back to topmRNA from alignment at H-paniculata_contig15698:847..3807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15698.3300.1 ID=mRNA_H-paniculata_contig15698.3300.1|Name=mRNA_H-paniculata_contig15698.3300.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2961bp|location=Sequence derived from alignment at H-paniculata_contig15698:847..3807+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACGGCCAGCCCTTCTCTGTGTTGTTGCACCAAGGAAAAACGAACACCCA
CTGCCCCTTACTCGACCTACATTGCTGCACTACAGATTGTGCTAACCAAC
GCCACTCTGGTATTCGAGCCTGGTAGAGTAATCGAAAGAGAGGGAGACGG
ACGGGCAGAGCATTGATCGGTCGATTTTGTGCGGACTTTATTTCATCCTG
CGTGAGTTGGTTTTTCTTTTTTCACCTATTTTGGGAACTCTGCCTGGGCC
GCCGCGGGTGTGTGAACGGGAAAAGCTTGGACTTTTCAGGAGCGATGTCG
GAGAGCAAGGAAGACGGAAGGTGAGTCCCGCGCCTATTACGCCTTGGAAG
CGCCTCGCAAGCAGCTGTCGGTGCATACAACTGCCGTTTAGTATGGTGTA
GACGTCGCGAACCAACCGTTTAGGGATGTTCCCCCCCCTACTGCCATCTG
TGCTGCTGACACCTTTTGAAAAATTTGGGGCTCGACATATGGTTACAAGT
AGATTGTAATAACTGACTGACTTATCTGTATAGCTTGTGTACTCTCTACT
CTGATGTGCAAGTATTATAGAAAGGACGGGACGATGGAGTGCGGCACGCG
ACACAGTCAGTACTGTCGCCTGTAGGAGGTAATAGTCATGCCTCACGGGT
TGTCCTTTGCTTGGCTGTCTGGAGGTAGTATGTAGCCCAAGGGCTCCAAC
GATTCCACCCACTGTCCACTTGAGAATGAAACGGTCATGTTTGTTTTGTT
CGAGCAATAAATGTGTTTGGGTCCCTCACACCCAAATTAACTCGTACATT
TTGTTTTGCTCCTCTTTTACTCCCTAAAGCCATTTCATCATTTAGATTAC
GAGAAGCTGTACCCCACCGGTCCACTGGCGATATAAGTACTGTGCTGCAC
AGTAGATGCCTGTATTACAGTAGTGTAGTAGCACAGCACAATTTTGTATC
ATTTTTCGTTGAGGTGTATATATGACTTGCATGTAGGCCTTTCGGTACCT
GTTCTACACCGCTTCGGTGGTATGTAATGCAGCACAGAGACAGACAGCCC
ACCCCACCGAGGGTGGATTCTCCCGCTCAATATCCCCGACCACCGACATT
GTAGTCGTCATGTTCCAAATTTGTAAATTACACACGAGATGTAAAATTAG
GGAGGGAAATCATCTCGCAAGTGTCGGTTCCGTTGACCCATGACATACAT
ACAGACATGCAGGGAACCGCTATCGTAAAGGCAACTGATACAAAGGGGGT
CGATTTTCATGAGGAACTGGCGATAATGATGACTGATGAAAATTAATGCA
ACTTCGGGGAGTTGCTCATCACAGGACTCACCAGGGCCGGTCATTACTTA
TACCCTCTCGGCACCCCTCAAGTCCTTCGGGGTGTCATAGGCCAGGTCGC
TCGCTGTCTTGATGATATCTGTTCATCTCTATCTTCTTCGTACTTGCAGG
CATCCTGAACTATCCTGAGCTATCCCACGTTTTCTGTGAGCGTGCCCATT
CTCCTTGGTGGTATAGGGGTGGGGTTACGGTGGGGGGGACTTCAGGCGGC
CAGCTTGATATGTGTGTACAACGCCTCCGTCGCTACATGGTCTACTTTCG
GTTTGCTGAGCAGTGACGAACCCCCGCGTTGCAAGTGCAGTTGTAGTTGC
TAATTGCGGCTGTCAGAAGCAGAAATATGTTCATCAATTGGTCGGAAAGA
AAGATCGAGTTTAACTCCGCACGGTCACCGTATTAAGGGATACAAGAGTC
ATCATGACGTCAAGCTCCTGAGCCGACCTGATGCGTGCGTAGCGCCCATT
TTTTTGCTCAAATGGACGCCGTTGGACGGCACCGATTTGAGCTCTGCCAA
AGCACGCAATGCTCAGGGGGTGGGGGGGTCAGGGTCAAGGTTACCTACCG
TTAGTTCCGGTTTCGTTCTGCTCGCGTCGGTGCACCACAACAGCGTAAAC
CACGAAACAAAGGAACCGAAAACGACCTTTTTCTACCAATTGGTAAACAG
GCCTCGTCAGAAACATCCCGTGCTTTTATCTAGAGTGTGCAGTGCCTTCA
CCCAAGCAGTGCAGCAGGGACTCTCTGGTGCCCATTCTCAATCCCGCTGC
AGTACTACGACATGACTATATTCTTCCCTATTCGGAGACTCATTTGCCCG
CGGTCACGATAGAATACCGCAAAATATATTTGTAAGTGAATATATGGCTT
TATGTACTCCCACACTTGCTGCCCCATGTGATTCACTGGCTGTGTGTTTC
ATCTGTATACAAGTGTATATCAAGCATCGCACACCAACTCCGTGAGACAA
TGCGGAACGGTAACGTTACCAGCCCTGGGCATGTGTTTACTCAATAACTA
ATGTTTTACCATTGTGCTCGTGGCGGGGTTGGCTTATCGGTCACTACTGA
CTTTTGTTCTGTGCTTCTTGTTTAGCGTCCGAAAATGCCATTTATACATA
TATATCTCACCGACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACACTCACGTCGCCACTATTTTTTTCTTCAAATG
AATCGACCGACCCACCAACCATCCAACCAACGAGCTAACTAACGTGTGCC
ATGCGTATGCTCAACGTGTATTATCATACGCGGGGCCACAACGAAATCGC
ATTTCACCATTACCACCACAACCTCCGCTAGAACGAAGAAAGGCGAAGGC
ATACCTCCTGAGTCCGGCTCGAGCGTACCTACAACGGCTTCGGCGACGAA
CGGAAAGGGTGGCATAGAGTCGCCGACGGCCACCAACGGGAAACGGAAGC
AGCAACAGGTGGTGGAGGCGGAGGAAGACGAAGATGAAAGGGCAGATAGA
GAGTACGGGGATGATGGCGAGGAGGACGACGACGACGACGACGATGATGA
TGATGATGAGGGAGTGGGGGGTGATGGCGATAGAGCGGGTGGGTTAGAGG
AGGATGGCGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig15698:847..3807+ >mRNA_H-paniculata_contig15698.3300.1 ID=mRNA_H-paniculata_contig15698.3300.1|Name=mRNA_H-paniculata_contig15698.3300.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig15698:847..3807+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGAGAGCAAGGAAGACGGAAGATGTCGGAGAGCAAGGAAGACGGA
AGAACGAAGAAAGGCGAAGGCATACCTCCTGAGTCCGGCTCGAGCGTACC
TACAACGGCTTCGGCGACGAACGGAAAGGGTGGCATAGAGTCGCCGACGG
CCACCAACGGGAAACGGAAGCAGCAACAGGTGGTGGAGGCGGAGGAAGAC
GAAGATGAAAGGGCAGATAGAGAGTACGGGGATGATGGCGAGGAGGACGA
CGACGACGACGACGATGATGATGATGATGAGGGAGTGGGGGGTGATGGCG
ATAGAGCGGGTGGGTTAGAGGAGGATGGCGACAACGAAGAAAGGCGAAGG
CATACCTCCTGAGTCCGGCTCGAGCGTACCTACAACGGCTTCGGCGACGA
ACGGAAAGGGTGGCATAGAGTCGCCGACGGCCACCAACGGGAAACGGAAG
CAGCAACAGGTGGTGGAGGCGGAGGAAGACGAAGATGAAAGGGCAGATAG
AGAGTACGGGGATGATGGCGAGGAGGACGACGACGACGACGACGATGATG
ATGATGATGAGGGAGTGGGGGGTGATGGCGATAGAGCGGGTGGGTTAGAG
GAGGATGGCGAC back to top
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