prot_H-paniculata_contig15688.3295.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15688.3295.1
Unique Nameprot_H-paniculata_contig15688.3295.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
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BLAST of mRNA_H-paniculata_contig15688.3295.1 vs. uniprot
Match: D8LSG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSG5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.000e-45
Identity = 107/250 (42.80%), Postives = 142/250 (56.80%), Query Frame = 0 
Query:    4 VRTPRPRALEEKAWQEALKAKAEAISASPREQXXXXXXXXXXXXXXSSSVYRKAVSKRVRKGVFQGVRMPSDRLSKSFAGGTELDALPGRLESVLFPERHVYVDWPC-DKALPALARDVASSPVRYAVAFRSTQPRIMLEDAHKETHGWSGPGAYEWDGSIPPTNGNEDNNANLNHGS-----------------------SPGGTGALRPKGIAVRDPSRKSASFRPESSAFIAPSQANVREYAAVPSS 229
            +R PR R+LE++A +EA++AKA+A++ASPRE               +    ++  +   ++ ++ G+ MP +   K FAGG E+DALPGRLES++FP+R  YVDWP  D +LPALA DV  SP+R+AVAFRS QPRI+  D  +ET GW GPGAYEWD   P  N                                         G  RP+GIAVRDP R S +FR  SSAF++P+Q NVR +A  PSS
Sbjct:  164 IRPPRSRSLEDQALREAIEAKAQAMAASPREGKPDPETQRRLRGGGNRRKLKRGPAASDKRDMYHGIAMPGNTFEKPFAGGNEVDALPGRLESLIFPQR--YVDWPKEDASLPALALDVQRSPIRHAVAFRSKQPRIVCYDPQRETRGWDGPGAYEWD-DRPDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSAEKGGARPRGIAVRDPGRPSPAFREGSSAFLSPTQTNVRGFALAPSS 410
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15688.3295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSG5_ECTSI1.000e-4542.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15688contigH-paniculata_contig15688:494..2343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15688.3295.1mRNA_H-paniculata_contig15688.3295.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15688 494..2343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15688.3295.1 ID=prot_H-paniculata_contig15688.3295.1|Name=mRNA_H-paniculata_contig15688.3295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
TSPVRTPRPRALEEKAWQEALKAKAEAISASPREQQQSPKRRGRGGGAAS
SSVYRKAVSKRVRKGVFQGVRMPSDRLSKSFAGGTELDALPGRLESVLFP
ERHVYVDWPCDKALPALARDVASSPVRYAVAFRSTQPRIMLEDAHKETHG
WSGPGAYEWDGSIPPTNGNEDNNANLNHGSSPGGTGALRPKGIAVRDPSR
KSASFRPESSAFIAPSQANVREYAAVPSS
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