prot_H-paniculata_contig15668.3290.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15668.3290.1
Unique Nameprot_H-paniculata_contig15668.3290.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length349
Homology
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: D7G9B1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.710e-17
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
Query:  295 GTGGDEEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRRGG 349
            G  G + EE+ ECRVCRGDDEGG RPL +PC C GSIKYVHQDCLVEWLRSR GG
Sbjct:   44 GDAGSDSEEEPECRVCRGDDEGGARPLVHPCRCRGSIKYVHQDCLVEWLRSRGGG 98          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A6H5LAW9_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW9_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.010e-17
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
Query:  295 GTGGDEEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRRGG 349
            G  G + +E+ ECRVCRGDDEGG RPL +PC C GSIKYVHQDCLVEWLRSR GG
Sbjct:  353 GDAGSDSDEEPECRVCRGDDEGGARPLVHPCRCRGSIKYVHQDCLVEWLRSRGGG 407          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A2P5D1Q2_TREOI (Zinc finger, RING-CH-type n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D1Q2_TREOI)

HSP 1 Score: 65.5 bits (158), Expect = 8.460e-10
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  297 GGDEEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRR 347
            GG   +ED ECR+CRG  E G  PL  PCAC G+IKYVHQDCL++WL  R+
Sbjct:   47 GGGRVDED-ECRICRGPGEAGN-PLRYPCACRGTIKYVHQDCLLQWLNRRK 95          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A2V3IWH5_9FLOR (Putative E3 ubiquitin ligase SUD1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWH5_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 8.920e-10
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  300 EEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWL 343
            E E DRECR+CRG+DE G RPL +PC CSGSIK+ H+DCLV WL
Sbjct:    3 EVEADRECRICRGEDEPG-RPLLHPCRCSGSIKFTHEDCLVNWL 45          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A3Q7ECL8_SOLLC (RING-CH-type domain-containing protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7ECL8_SOLLC)

HSP 1 Score: 64.7 bits (156), Expect = 2.870e-9
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query:  299 DEEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWL 343
            D+EEE+  CR+CR   E    PL  PCACSGSIKYVHQDCL++WL
Sbjct:   62 DDEEEEDVCRICRNPGEA-DNPLRYPCACSGSIKYVHQDCLLQWL 105          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A7S3BKM1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BKM1_9VIRI)

HSP 1 Score: 67.4 bits (163), Expect = 8.840e-9
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
Query:  304 DRECRVCR-GDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRR 347
            +RECR+CR G+D+ G  PL +PCACSGSI+YVHQ+CL  WL  +R
Sbjct:   68 ERECRICRLGEDDAGMGPLFHPCACSGSIRYVHQECLQRWLAHQR 112          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A8D0D8J2_SANLU (Membrane-associated ring finger (C3HC4) 7 n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8D0D8J2_SANLU)

HSP 1 Score: 64.7 bits (156), Expect = 1.100e-8
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  300 EEEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRRG 348
            +EEE   CR+C+  +E  T PL  PC C+GS++YVHQDC+  WLRS+ G
Sbjct:   59 DEEEGDLCRICQMGEESATNPLIQPCRCTGSLQYVHQDCIKRWLRSKIG 107          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A7S1XRK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRK8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.620e-8
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  303 EDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRRGG 349
            ED ECR+CRG  E   +PL +PC C+GSI+YVHQ CL EWLR R  G
Sbjct:   53 EDLECRICRGGPEP-DQPLFHPCRCAGSIQYVHQPCLEEWLRFRDRG 98          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: M2WRH9_GALSU (E3 ubiquitin-protein ligase MARCH6 isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRH9_GALSU)

HSP 1 Score: 66.6 bits (161), Expect = 2.570e-8
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0
Query:  302 EEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRR 347
            E++ ECR+CRG +E   RPL +PC CSGSIKY+H+DCLV+WL   R
Sbjct:    6 EDEPECRICRGTNEP-DRPLFHPCRCSGSIKYIHEDCLVQWLSEMR 50          
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Match: A0A835ISJ2_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835ISJ2_9MAGN)

HSP 1 Score: 66.2 bits (160), Expect = 3.730e-8
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  299 DEEEEDRECRVCR--GDDEGGTRPLANPCACSGSIKYVHQDCLVEWL 343
            DE++E+  CR+CR  GDDE    PL  PCACSGSIKYVHQDCL++WL
Sbjct:   33 DEDDEEDVCRICRNSGDDE---NPLRYPCACSGSIKYVHQDCLLQWL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15668.3290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9B1_ECTSI1.710e-1776.36RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5LAW9_9PHAE4.010e-1774.55RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A2P5D1Q2_TREOI8.460e-1060.78Zinc finger, RING-CH-type n=2 Tax=Cannabaceae TaxI... [more]
A0A2V3IWH5_9FLOR8.920e-1070.45Putative E3 ubiquitin ligase SUD1 n=1 Tax=Gracilar... [more]
A0A3Q7ECL8_SOLLC2.870e-964.44RING-CH-type domain-containing protein n=1 Tax=Sol... [more]
A0A7S3BKM1_9VIRI8.840e-962.22Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A8D0D8J2_SANLU1.100e-853.06Membrane-associated ring finger (C3HC4) 7 n=1 Tax=... [more]
A0A7S1XRK8_9STRA1.620e-861.70Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
M2WRH9_GALSU2.570e-860.87E3 ubiquitin-protein ligase MARCH6 isoform 2 n=2 T... [more]
A0A835ISJ2_9MAGN3.730e-865.96Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 306..349
e-value: 1.4E-10
score: 51.1
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 307..345
e-value: 5.2E-13
score: 48.9
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 299..349
score: 18.991
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 288..348
e-value: 1.9E-16
score: 61.3
NoneNo IPR availablePANTHERPTHR45981:SF3MARCH (MEMBRANE-ASSOCIATED RING FINGER (C3HC4)) HOMOLOGcoord: 102..347
NoneNo IPR availablePANTHERPTHR45981FAMILY NOT NAMEDcoord: 102..347
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 302..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15668contigH-paniculata_contig15668:438..4776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15668.3290.1mRNA_H-paniculata_contig15668.3290.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15668 437..4776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15668.3290.1 ID=prot_H-paniculata_contig15668.3290.1|Name=mRNA_H-paniculata_contig15668.3290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp
QRITSCIRWYIFRFLHHQGMDNDQLMVGTFGNNTSSASDVSDSLDCKIEK
RKSTLEHKALTNEGHCAGMPRKECSLGITRAAVEDNGSDDRDNAHGKVSA
AEESVSEEAKEEAKYLGEESNQDGSKSGMEKRNSTDSVRGKAAREKKQLV
GNAKQKGEPGQEEKGQEQQDTKTGAGHLSLFDLCPSTIIDEDDSAINNGH
AEGKVVDAENDHLSCRAKNKGIPSQRAAQEDGGDTSTRTSALVNSDAIDG
TAIDNDVHHPPGEARTARVGKESGDEAKEQGDHSEKAETVVENDGTGGDE
EEEDRECRVCRGDDEGGTRPLANPCACSGSIKYVHQDCLVEWLRSRRGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD