mRNA_H-paniculata_contig1566.3286.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 365 bits (938), Expect = 4.490e-111 Identity = 212/523 (40.54%), Postives = 277/523 (52.96%), Query Frame = 2
Query: 206 GGALPHTEVPDTVDFNAP-QGFLWQPTSLGKLNCP-----SEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLK-------------------------------------------------------------------------------------------------------------GAYGKRTRLYEGFDFEGKN-----------------ATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMANPESKFEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTWKK 1378
GG LP+ V +TVD P +G LWQPT + L C + + C++T+ FCLM + +YQ PWK+PMA MLQK S C+ N R++ LS LR Y+ HP+EFL P GF+YHETRTGSTLVANMLAHVP+NLV+SE ++AE+P+R C++C+ Q LL+ ++ LL ++GH + FFKF D+T + M A+P+V WVYLFRDPV+VMVSNLK GAYGKR R Y+GFDF+ + A +K G + + +SPCL ++ + +EI CA L+ LC++ + QL E GG GAVVEYTNLPDVVT +IYP FGMG + L+ H+PYLS AA MYSKSM+NPES+F+ GTDA YK +MAE AY+ AAE TGL A+Y++LQ LQTW K
Sbjct: 5 GGKLPNVPVSETVDLEVPREGLLWQPTLMSPLKCGEAADLAADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSGCSKAENLRSFHLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSESNMAEDPVRRCSHCTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKCFANRPEKQQAMGSCVAELRRELEAALAGPAALQAASRGSVRRLATQARGDADERRQHPYLLVLLVFRRSLNFGLRRWCFCTCSRRNSHTHGSIAASPQRLGSLPRLQHGAYGKRERFYKGFDFDAADHDMXXXXXXXXXXXXXTANHDPDKPEGKSGRPPMSPCLMSKPPSDMKGKPKEEI-CADRLRTLCQAAVDQL---------EEGG-NGAVVEYTNLPDVVTEYIYPVLFGMGDDKLKDHLPYLSAAAGMYSKSMSNPESEFKQGTDAGYKHVMAEKAYQDAAEVTGLSAVYRKLQGLQTWHK 516
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 276 bits (707), Expect = 1.330e-79 Identity = 126/230 (54.78%), Postives = 169/230 (73.48%), Query Frame = 2
Query: 206 GGALPHTEVPDTVDFNAP-QGFLWQPTSLGKLNC-----PSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFE 877
G LP+ + +TVD P +G LWQPT++ L C S + C++T+ FCLM + +YQ PWK+PMA MLQK S+C+ N R++ LS LR Y+ HP+EFL P GF+YHETRTGSTLVANMLAHVP+NLV+SE+++AE+P+R C++C+ Q LL+ ++ LL ++GH + FFKF D+T + M A+P+V WVYLFRDPV+VMVSNLKGAYGKR R Y+GFDF+
Sbjct: 129 GAKLPNVPISETVDLEVPREGLLWQPTTMSPLKCGEAADASADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSECSKAENLRSFRLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSENNMAEDPVRRCSDCTEMQKVALLREIMTLLGNGRNGHEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKGAYGKRERFYKGFDFD 358
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A836CJX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX0_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.460e-58 Identity = 135/406 (33.25%), Postives = 207/406 (50.99%), Query Frame = 2
Query: 242 VDFNAPQGFLWQPTSLGKLNCPSEEPCQST-VRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSK----------------SMANPESKFEMGTDANYKQIMAEDAYRK----------AAESTGLMALYKQLQELQTWKK 1378
VDF A +G W+ + + T V FC M++ DYQ+ PWK PM ML S C + ++R Y+L+ L A+ + +P+ +L P+GFI+HETR GSTLVANM+AH+PT L++SE + ++ A+ + SE+ + L R L + H FFK T + FPD PWV+LFR+P+DV+VSN++GA+GK+ LY E + IE ASK ++PCL + +++ E+ CA L K+C + A V++Y NLP+ VT +++P HF G E +PY+ +A YSK +M ++ F +G DA+ K+ DA R+ A E++ + Y++L +Q W K
Sbjct: 49 VDFPAVEGREWRAKDVYVTG-------EGTFVSFCNMNIADYQSEPWKTPMDQMLAVASNCRSRTHTRKYSLADLMAHQQRNPERYLSPSGFIHHETRCGSTLVANMIAHIPTALMVSESLVPYKALQLKAS-GELRVSEV-RALFRALCFTQHHHDRCFFKLPGGTMLSQFQEVFPDTPWVFLFREPLDVVVSNMRGAWGKKELLYS----EAASGQLIEK-----ASKKAIAPCLRMPLPDGVTRDDAPEMRCAGGLDKICRDAMAAARARPD---------LALVLDYKNLPEAVTEYLWPVHFRQGPARTERDLPYMEEAGRAYSKHNXXXXXXXXXXXXXKTMKRDKADFALGADADLKEKQLTDAIRRXXXXXXXMRDAVETSTITGSYEELLAMQRWTK 427
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI) HSP 1 Score: 216 bits (551), Expect = 1.760e-57 Identity = 141/399 (35.34%), Postives = 201/399 (50.38%), Query Frame = 2
Query: 227 EVPDTVDFNAPQGFLWQPTSL-GKLN--CPSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKC-NTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKE---ITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQ--ELLEAHMPYLSKAASMYSKSMANP-----ESKFEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTWKKQ 1381
E + D AP G LW P +L G +N P V +C + + Y +PW F M A Q+ S C + +RTY LS+L+ +E +PDEF+ PTGFIYHETR GSTL ANM+A VP+N+V C EL++ + RL+ +DGHT+ FFKF + + ++ A+P+ W+YLFRDP++VM SNLKGA+ K+ E +N T+ G PC+ G + RK E TCA L+ L E LTQ+ G G VEY LP+V+T ++YP H GM + E ++ +YSK MA P +++ G D K+ ++ R AA + + A Y+ L ELQ W+K+
Sbjct: 102 ETVEMDDLRAPPGRLWIPAALSGPINHDSPDNALFNVLVAYCQLDMVAYHESPWLFAMGAFHQRTSGCMDDPSLTRTYRLSSLKRVLEENPDEFMDPTGFIYHETRCGSTLSANMIAAVPSNIVH--------------RCPDGLREELVRTVFRLMGPVQDGHTDLFFKFQSSKFLPAIEQAWPETKWIYLFRDPLEVMSSNLKGAWRKQVASAE------RNMTSPAVYNLG-------GPCVRGAKGGGSRKAPSPESLVTTCAKHLETLNEIALTQIV---------EGSPNGLAVEYRQLPEVMTEYVYPKHLGMAETEEERSEFKRWMEPVTHVYSKGMATPAEGAVSKEYQQGMDLELKEQGSDPRMRAAAAT--MCANYRSLVELQRWRKE 462
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.130e-39 Identity = 134/431 (31.09%), Postives = 203/431 (47.10%), Query Frame = 2
Query: 122 GIRRLFGSSALRAAVEFKQAGRGAQEDKGGAL-PHTEVP-DTVDFN-APQGFLWQPTSLGKLNCPSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYA--LSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMA-----NPESKFEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTWKKQA 1384
G +L G +A AA + K A Q + G L T+ P DT+D + G LW P S+ K + +P V+ C ++ Y A PW PM +L S C + +STL+ +E PTGFI+HETR GSTLVANMLA V TN++ SE + + C C Q L++++ + T H + +FKF + I +++ A+PD PW+++FR+P++VM+S L G + EG + E A KP SK P L + KE + A L LC+ + G KG +VEY +LP + + + PDH+G+ + EA + + MYSK + +SKF TD ++ A A ++AA+ L Y +L+ L TW ++
Sbjct: 147 GNAKLRGGAA--AANKAKNAAAKPQVGEHGMLHDFTKTPLDTLDLDDVKDGHLWIPVSVNKFDNLETDPL---VKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTLKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAM-TRSARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL----GAQRIGMEGMEKE-VAARVERGMKP---SKILSKPKLG---------KPPKETSAAQLLAGLCKKAIHAFEENPG---------KGMMVEYPHLPHGIVSTVLPDHYGV--TVSEAERERMMTSTQMYSKVASFAKGPTTDSKFTEDTDTKHEA--ASVAVQEAAQRL-LYPDYYKLRSLSTWPAES 540
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A835YUK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK0_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.370e-34 Identity = 122/484 (25.21%), Postives = 183/484 (37.81%), Query Frame = 2
Query: 242 VDFNAPQGFLWQPTSLGKLNCPSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPD-----EFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCA----------------------------------------------------------------------------------------------NCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLN-----GGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMANPESK---FEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTW 1372
VD +G W+P + Q ++ FCL++ +Y PWK+PM LQK S+C +SRT+ + LR ++E EF+ PTGFI HETR GSTL+ANM+AHVPT L++SE + N I + + ++++Q ++R L G + F KF A + + AFP PW++LFR P +++ S L G + K YE D + T ++ +P PCL GG + E C L LC L L + G V+Y LPDVV + ++ +HFG L PYLS+A+ +YSK+ P F+ DA +K+ A ++ + Y +L +Q W
Sbjct: 29 VDLPPVEGKEWRPFQV------DFSDNQISLSFCLLNYDEYSDEPWKYPMDGALQKVSRCREQ-SSRTFTVDELREHMEGRGGGRGGGEFIEPTGFIQHETRCGSTLMANMIAHVPTALMVSESLLPYNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSSWGRRMTRQERADVIQTVVRSLCHTSHGRSACFIKFPSAFYLSDLLTAFPTTPWIFLFRQPSEILASQLGGQWSKHDVFYEKRD----DGTVVQVAEPPR------KPCLMWAIDYGGAV-------STEERCVRGLSVLCREALAALRSSPA----------GLAVDYATLPDVVADHLWTEHFGQSAAALAHDAPYLSEASRVYSKANKQPARDPLAFDAQGDAAFKESQLTPEALAALRASDMYTQYNELVAMQRW 478
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 144 bits (364), Expect = 4.280e-33 Identity = 109/371 (29.38%), Postives = 174/371 (46.90%), Query Frame = 2
Query: 233 PDTVDFNAPQGF---LWQPTSLGKLNCPSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLL-ATAKDGHTNAFFKFSDAT--GIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMG---QELLEAHMPYLSKAASMYSKSMANPESKFEMGTDANYKQIMAEDAYRKAA 1318
PD QG W P S+ + E V C ++ Y +P K PM L S+C G R L+TL + + + P+GF++HE+R GSTLVANMLA VPTN+V SE + + C +CS + +++LQ L+ L+ A+ + HT+ FFKF AT I S+ AFP+ PW++++RDPV M+S+ K G N + ++ + + + + + E + CA+ L L S L AD S +G +V+Y ++P + +++P HFG+ ++ L H A+S+YSK+ ++ +D K+ A A + AA
Sbjct: 93 PDAASGCPAQGCPPRFWAPVSIAGV-----EHGDPRVSLCKLAFDTYWRDPSKTPMFRDLASASRC---GRGRAGTLNTLYEDMRKKNIKPVKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRSCSKQRKTDILQKLIALMGASPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMSHFKNGVG--------------NGPCLRQRRSPPPATIKILKAESAAKASRTSPENY----CAAHLAMLTSSALD---------ADGSSD-RGLLVDYASMPGALEAYVFPKHFGLSLAPEDALRTHA-----ASSVYSKARGGRKAG-AWESDNEKKERAATPAIKSAA 421
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A7S2H7V9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H7V9_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.860e-30 Identity = 115/377 (30.50%), Postives = 170/377 (45.09%), Query Frame = 2
Query: 272 WQPTSLGKLNCPSEEPCQSTVRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFS--DATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAI---ENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMANPESKFEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTWKKQAH 1387
W P S+G + P T+ C + Y NP PM L SKC+ NS++ LS L+ +EA PD L PTGF++HE+R GSTLVA+ML +LV SE + P A+ P+ L ++L + ++ HT FFKF +A I + AFPDVPW ++FR+PV VM+S+LKG+ G +A A+ + P K ++ G + E CA L L ES ++ G ++ Y +LP ++ + + DHF + + E L+ A +YSK K E D+ K+ A DA + AA LY ++L +AH
Sbjct: 89 WTPVSVGSGSDP-------TINLCKLDYDSYWRNPNNLPMFKDLVGKSKCSGK-NSKSAKLSVLKKEMEADPDGTLQPTGFVFHESRCGSTLVADMLGSQAHHLVFSESA----PPSSIASRGPNAHRVLRDVMLLMCRSSY--HTRCFFKFQSINAPRIKTYLAAFPDVPWTFVFREPVQVMMSHLKGS--------------GSHAGAVCMRSRRSPTAKHKQIIAELGKGSSSVSA------EEFCAVHLAYLSESAYEAFTSTS----------TGMLLNYEDLPSILPSKVVGDHFRVPLDA-EGQTRMLN-VAKIYSKGRKGSPKKGEFTGDSLKKENTASDAVKNAAAQF----LYPSYRKLAAASVKAH 415
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.040e-29 Identity = 115/337 (34.12%), Postives = 165/337 (48.96%), Query Frame = 2
Query: 332 VRFCLMSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFLMPTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGC--ANCSPSQTSELLQLLLRLLATAKDGHTNAFF-KFSDATGIHSMSL---AFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGT-ASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMANPESKFEMGTDANYKQIMAEDAYRKAAE 1321
+ C + Y NP +FPM+ L + C+ N + L+++ A V+ + L PTGFI+HE+R GSTLVANMLA VPTNLV SE S+ + I C A CS T LL++ + LA + H + FF KFS +T + M L AFP+ PW Y++RDPV+++VSN + G+ I KK A + L G ++ EE+ CA+ L LC++ L Q+ E G KG V Y L + V + P HFG+ E ++ + +YSK+ E+ F+ D KQ A A + AAE
Sbjct: 160 MALCQFDISPYHRNPEQFPMSRDLVG-AFCSK--NRLKHKLASVHA-VDERAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAI--LAMGRSHHHDHFFIKFSSSTVV-DMDLILKAFPETPWAYIYRDPVEIIVSNFQ---------------RGRGGPCIRAKKNAPKAVQDILKTDRRGAS--RVSDEEY----CAAHLTMLCQAALEQM---------ELPGSKGHAVAYETLVEDVLRVLVPGHFGVSMNSEETAR--MTAQSELYSKARTG-ETVFQ--GDTEQKQERATQAMQVAAE 454
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI) HSP 1 Score: 132 bits (332), Expect = 2.770e-29 Identity = 98/295 (33.22%), Postives = 147/295 (49.83%), Query Frame = 2
Query: 503 PTGFIYHETRTGSTLVANMLAHVPTNLVMSEHSIAENPIRGCANCSPSQTSELLQLLLRLLATAKDGHTNAFFKFSDATGIHSMSLAFPDVPWVYLFRDPVDVMVSNLKGAYGKRTRLYEGFDFEGKNATAIENKKPGTASKFFLSPCLNGGRLLKLRKEEHKEITCASWLKKLCESVLTQLSAERGEGADESGGVKGAVVEYTNLPDVVTNFIYPDHFGMGQELLEAHMPYLSKAASMYSKSMA-----NPESKFEMGTDANYKQIMAEDAYRKAAESTGLMALYKQLQELQTW 1372
PTGFI+HETR GSTLVANMLA V TN++ SE + + C C Q L++++ +A + H + +FKF + I +++ A+PD PW+++FR+P++VM+S L G + EG + E A KP SK P L + KE + A L LC+ + A G KG +VEY +LP + + + PDH+G+ + EA + MYSK + +SKF TD ++ A A ++AA+ L A Y +L+ L TW
Sbjct: 141 PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMARSAR-HDHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL----GAQRIGMEGMEKE-VAARVERGMKP---SKIPSKPKLG---------KPPKETSAAQVLAGLCKKAIHAFEANPG---------KGMMVEYPHLPHGILSTVLPDHYGV--TVSEAERERMMSTTQMYSKVASFAKGSTTDSKFTEDTDTKHEA--ASVAVQEAAQRL-LYADYYKLRSLSTW 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1566.3286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1566.3286.1 >prot_H-paniculata_contig1566.3286.1 ID=prot_H-paniculata_contig1566.3286.1|Name=mRNA_H-paniculata_contig1566.3286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp MSVGDYQANPWKFPMAAMLQKHSKCNTIGNSRTYALSTLRAYVEAHPDEFback to top mRNA from alignment at H-paniculata_contig1566:12366..20272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1566.3286.1 ID=mRNA_H-paniculata_contig1566.3286.1|Name=mRNA_H-paniculata_contig1566.3286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7907bp|location=Sequence derived from alignment at H-paniculata_contig1566:12366..20272- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1566:12366..20272- >mRNA_H-paniculata_contig1566.3286.1 ID=mRNA_H-paniculata_contig1566.3286.1|Name=mRNA_H-paniculata_contig1566.3286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at H-paniculata_contig1566:12366..20272- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |