prot_H-paniculata_contig15655.3282.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15655.3282.1
Unique Nameprot_H-paniculata_contig15655.3282.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
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BLAST of mRNA_H-paniculata_contig15655.3282.1 vs. uniprot
Match: A0A836CP36_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP36_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.570e-7
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = 0 
Query:    1 MLLVSLDGRDVTGATFDFVMEKMMAIPSGTSIDLVFR----DPSVPVXXXXXXXXXXXAKTCEITVYGPDGKPVVVTAKDGDNLRRVLLDAKINVY 92
            M+LVSL+G D T   FD +M+ ++       I L F     D  +P               CE+ V  P G+ +V+ A++GDNLR+VL+  K+++Y
Sbjct:   85 MVLVSLNGIDCTTKDFDTIMDMLIGATDSQPIQLSFSLEVDDEQIP--------QPIKTGPCELHVLLPKGETMVLKARNGDNLRKVLMAGKVSIY 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15655.3282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CP36_9STRA8.570e-733.332Fe-2S ferredoxin-type domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15655contigH-paniculata_contig15655:5703..5978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15655.3282.1mRNA_H-paniculata_contig15655.3282.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15655 5703..5978 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15655.3282.1 ID=prot_H-paniculata_contig15655.3282.1|Name=mRNA_H-paniculata_contig15655.3282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MLLVSLDGRDVTGATFDFVMEKMMAIPSGTSIDLVFRDPSVPVPTPPPPP
PPPPAKTCEITVYGPDGKPVVVTAKDGDNLRRVLLDAKINVY
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