mRNA_H-paniculata_contig1556.3245.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: D7FSY2_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY2_ECTSI) HSP 1 Score: 400 bits (1029), Expect = 1.000e-123 Identity = 219/453 (48.34%), Postives = 257/453 (56.73%), Query Frame = 2
Query: 362 VDFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRPGWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYRV 1720
+DFRVATYN+L SHLAEP+RFP+C P++L APTRL+RVK KL E+ +G+V+CLQEV I WAG+ HV+FM RGYAFVTA+YG N YMGVALAW L KYE +TVD TR+SDTR WGR+ PR EP +A++RFNQ +F RLRPK AA PNG GT FC+GTYHMPCLFN RPVMVMHTS+ ++HL LA +PLV AGDFNFNP S+CYK+ +GDL S DFP RP WEK+W+P TG L SAY++V+GKEPDFTNNAKVE W FIDTLDYIFHTPG+ A KVLPLKHR+EV GPFP EPSDHV+LAAEY+V
Sbjct: 53 MDFRVATYNILCSHLAEPTRFPQCSPRNLDAPTRLKRVKHKLDAEISKGSVICLQEVGIGWAGDLHVYFMDRGYAFVTAHYGKHFNNYMGVALAWPLDKYECLTVDTTRLSDTRRWGRE----------------------------------------------------------------------------PRXXX---------------XXXXXXXXAEPPST-PIAERRFNQVLFARLRPKTGAADL-----------------PNG----------GT------FCIGTYHMPCLFNIRPVMVMHTSLAIRHLAKLAGPDPLVFAGDFNFNPDSDCYKLAVEGDLPESSGDFPVRPEWEKDWTPKTGVCLQSAYKQVDGKEPDFTNNAKVEDWDPFIDTLDYIFHTPGITAVKVLPLKHRSEVNGPFPVSEEPSDHVILAAEYKV 380
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: C1MX28_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MX28_MICPC) HSP 1 Score: 251 bits (640), Expect = 2.420e-69 Identity = 160/452 (35.40%), Postives = 209/452 (46.24%), Query Frame = 2
Query: 365 DFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRPGWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYRV 1720
D RV TYNVLSS L EP+ F C P+ L PTRL++ KL++E+ +GAV+ LQEVS W GE HVFF RGY V++ YG P NGYMG+ALA + KY+ V VDI+R SDT+ R P P+ +L PL L G KR ++ + W +A+ RFN ++ L+ K SSG+ F V YHMPC+F VM +H+ + + +A S P+V+ GDFN P Y ++T GD+ P P E WS A + SAY G EPDFTN A+++ P+FIDTLDYIF +P + +V+PL HR+EVKGPFPS EPSDH+LLAA RV
Sbjct: 112 DARVVTYNVLSSSLCEPTYFTHCAPEDLDPPTRLKKTLVKLEDEMKKGAVIALQEVSQKWTGELHVFFAKRGYHLVSSLYGKPFNGYMGIALAVPIDKYDVVKVDISRCSDTKRLPR-----------------------------APKPSKMKELLVD-------------------KPLGLYYFLTG---KRAKQSD-----------------------------WALARNRFNTIMYATLKCK-------------------------------SSGVE--------FGVANYHMPCMFRDPRVMTIHSQLAAAYAQKMAGSLPVVLMGDFNLKPGDGGYDLITTGDIDAAHEAAPVAPDGE-TWSTALTYPMRSAYHVATGSEPDFTNFAQIKDDPQFIDTLDYIFISPTVDVAEVMPLPHRSEVKGPFPSAVEPSDHILLAATVRV 443
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A836CFS4_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFS4_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.190e-66 Identity = 156/456 (34.21%), Postives = 216/456 (47.37%), Query Frame = 2
Query: 365 DFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRPGWEK--NWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKG--PFPSETEPSDHVLLAAEYRV 1720
+FRV TYN+LSS L + CD +L++ RLQR+++KL E G+V+CLQEVS+LW G+ HV+ GY VTANYGN NG+MGVA+AW YEAV V I ++DT+ WG AP TT S++TT + + + ++LM+L P + G D W A++R NQ +FVRLR PV CV TYHMPC F P+M +H ++ +H+ LA + V AGDFNF P S Y +VT+G L+ P +P P WE +W P A L SAYREV+G+EP+ TN + + F LDY+F+ L T+V+PL+ ++G PFP+ EPSDHV+L A +++
Sbjct: 71 NFRVITYNLLSSSLDDAKSHIMCDRDNLNSARRLQRIQSKLAAECAAGSVLCLQEVSLLWVGQLHVWLQQHGYTMVTANYGNRFNGHMGVAIAWPQQTYEAVDVCIDNIADTKRWGW------------------------APRTT--------SIVTTFSILS--------------TAARSLMKLLPWASTPPPSSQIG--------------------GGNAADPWADAQRRHNQMVFVRLRXXX---------------------------------XXXXXXARPV-CVATYHMPCAFRVPPMMTIHAALAAQHVARLARGDAHVFAGDFNFTPDSPQYALVTRGALNSSDPAYPVPPPWEAPIDWQPQLAAPLRSAYREVQGREPELTNWSCIGDNGEFSGCLDYVFYGGELSPTEVIPLRDAAALRGQGPFPTAAEPSDHVMLGATFKL 426
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A5B8MV46_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MV46_9CHLO) HSP 1 Score: 238 bits (606), Expect = 4.450e-66 Identity = 145/449 (32.29%), Postives = 209/449 (46.55%), Query Frame = 2
Query: 374 VATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRPGWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYRV 1720
V +YNVLSS L+ PS F C+PKHL R ++ AKL+++V R AV+CLQEVS WAG+ H FF Y ++++Y GYMG A+A+ Y A V+I RV+DT+ W R++ P + V TT+ + L G P++E+ D +E+A+ R N + V+LR + GGN FCVGTYHMPC+F VMV+H+++ + + D A + ++ GDFNF P CY++ T+G LS D +P+ E++W P SAY G+EP+FTN AK+ P FIDTLDY+F++P L VL L HR++VKGP P+ EPSDH+++ A + +
Sbjct: 19 VVSYNVLSSSLSSPSHFRACEPKHLSQEQRYAKLTAKLEQQVKRKAVICLQEVSTAWAGQLHSFFQNEDYYLISSHYTKGWQGYMGSAIAFPTKAYAAEEVEIVRVADTKAWPRRAKPTLF-----------------------------DKVSTTVQSL-----------------------LFG-----PKKEQ---------------------------DHFELARNRMNTMVLVKLRSR---------GGGNS------------------------------FCVGTYHMPCMFWAPKVMVIHSALACQKVQDFAKDDHCILLGDFNFKPTDSCYELCTKGSLSEDDEFYPEATHPEESWKPEMEYGFESAYFRHNGEEPNFTNYAKIRDDPVFIDTLDYVFYSPSLKVVDVLDLPHRDDVKGPLPNAEEPSDHIMIGATFEL 344
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A4S1B2_OSTLU (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S1B2_OSTLU) HSP 1 Score: 232 bits (592), Expect = 5.310e-64 Identity = 160/459 (34.86%), Postives = 208/459 (45.32%), Query Frame = 2
Query: 365 DFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFN---HRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRP----GWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYRV 1720
D RV TYNVLSSHLAEP+ F CD L A TRL+RV KL+ EV+R AVV LQEVS+ WAG H +F RGYAF+ + YG P N YMGV LA YE V DI R+SDT + R E G PL + L V+ P + + R+ P D W+ A+ RFN ++ L+ K + ++ F V TYHMPC+F R VMV+H + ++ L+ + P V+ GDFN P + ++T GDL +P P G N P K+ SAY V G+EP+FTN+A+++ FIDTLDYIF T + VL L HR++VKGPFP+ TEPSDH++LAA RV
Sbjct: 15 DARVVTYNVLSSHLAEPTYFTHCDANDLRAETRLRRVIEKLEPEVERRAVVGLQEVSMTWAGPLHAYFAKRGYAFIVSLYGKPFNNYMGVGLAVPTDAYEVVKSDIARLSDTAKFPRAKK-----------------------------------------------EEVNLG------PLTPVYNLL---VQTP-----------------VNLWRKLRDYRPPSDEWQTARGRFNSILYATLKCK-------------------------------KTNVQ--------FGVSTYHMPCMFRTAADRRVMVIHAGIAAQYALNQSEGLPTVLMGDFNLKPGDAGHTLITTGDLDESHEGYPIMPAGYTGEPFNVKPQK--KMESAYVRVNGEEPNFTNHARIKDDDPFIDTLDYIFVTDDVEVVDVLDLPHRDQVKGPFPAATEPSDHIMLAATIRV 359
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A7S0WMR5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WMR5_9CHLO) HSP 1 Score: 236 bits (601), Expect = 5.660e-64 Identity = 152/458 (33.19%), Postives = 216/458 (47.16%), Query Frame = 2
Query: 365 DFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSD-TRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKR----PREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDF----PDRPGWEKN-WSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAA 1708
+ RV TYNVLSS LA +FP C P+ L A R +R+ KL+ EV++G+++CLQEV + WAG+ H FF RG+ F+ + YG P NGYMGV +A+ +SKY A + + R+SD R W R P PN++ + A + SP L RL + V+ PR ++ D W+ + +RFN V+L+ A GS VF V TYHMPC F VM +HT++ + A P V+ GDFN P+ Y+++T+G + + P + P +P ++ + W+ L SAY+E G EPDFTN A+V + P FI+TLDY+F +PG +VLPL HR+E GPFP+ +EPSDHVL+ A
Sbjct: 101 EVRVVTYNVLSSKLARSEQFPSCAPEDLKANVRYKRILTKLEAEVEQGSILCLQEVPMEWAGDLHTFFQQRGFHFLVSLYGTPFNGYMGVGIAFPVSKYRAEKMKLARLSDFRRDWPR--------------------------------PPRPNALQKALKAVS--------------SPAVGLWRLGTKSVRGLLNLPRPDQKV-------------------------DEWQYSMRRFNSIATVKLQ----------------------------CDATGS-----------VFSVSTYHMPCAFWAPKVMTIHTALCAQFAEREAGGVPWVLCGDFNIKPSDLQYQLLTEGRMDPNHPQYTTGCPVKPDYDNSDWAAELKTPLRSAYKEALGSEPDFTNYAQVREQPPFIETLDYVFLSPGWAVAQVLPLVHRDEAGGPFPNASEPSDHVLIGA 448
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A7S2SSQ8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSQ8_9STRA) HSP 1 Score: 232 bits (592), Expect = 4.000e-63 Identity = 179/475 (37.68%), Postives = 229/475 (48.21%), Query Frame = 2
Query: 371 RVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQR-VKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPV------FCVGTYHMPCLFNHRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFP-------DRPGWE-----------KNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIF---HTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAE 1711
RVAT+NVLSSHL+ P + C L RL+ +K KLQ EVD+ A++CLQEVS LWAG+ HVFF R Y F A+YG P NGYMGVA+AW Y+A V I+R++DT SS PS +R A ++T AW PS W S L+ L+ P XXXXXX R ++ P D E A++R N AI RL + P G N ++ N T +GS ++ PP F V TYHMPC+F VM +HT+++V+H+ A P V+AGDFNF P S CY + G + P +P R G + WSP TG L SAY E G EP+FTN AKV+ P FI TLDYIF + T LP + GPFP+ EPSDH+L+AA+
Sbjct: 10 RVATFNVLSSHLSSPDYYTACSSAALRQENRLRTCLKHKLQAEVDQNAIICLQEVSTLWAGKLHVFFEERDYCFFPAHYGRPFNGYMGVAMAWPRGLYQAEEVQISRIADTH----------SSWPS--------RQRGTA-----------AGRVSTRLAW---PS--------WVSSLRPLL---------PPVLLNLIAGFFXXXXXXRNARQRTQQDMAPRDPVEEARRRHNMAIVTRL----MRVPEGADGGRN--------MSANAT--SGSEEAPPSMSTPPPSSTEQSFVVATYHMPCVFWAPQVMAIHTALLVQHVAASAAGRPFVLAGDFNFLPGSACYNLAVTGTMDPADPAYPHGAAIGSSRQGATGVEGDSASESGQQWSPETGLTLRSAYAEDNGHEPEFTNFAKVKDDPEFIGTLDYIFLGGREWRVDGTLPLPALGQVRSGGPFPTLNEPSDHLLIAAD 421
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A7S0KHA2_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KHA2_9CHLO) HSP 1 Score: 227 bits (579), Expect = 2.970e-62 Identity = 155/468 (33.12%), Postives = 203/468 (43.38%), Query Frame = 2
Query: 335 SAPVTLVSMVDFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFN---HRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRPGWEK----NWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYR 1717
+A + V RV TYNVLSSHLA+P F CD ++L A RL RV AKL E R AVV LQEVS+ WAG H +F A+GY FV + YG P N YMGV LA L YE T DI+R+SDT + + VK+ ++ + + + P D W+ A+ RFN ++ L K A F V TYHMPC+F R VM +H + ++ L+ + P+V+ GDFN P + ++T GDL +P P K N PA K+ SAY V G+EP+FTNNA+++ FIDTLDYIF T + VL L HR++VKGPFP+ETEPSDH++LAA R
Sbjct: 3 AASTSSVEQAMARVVTYNVLSSHLADPGYFTHCDAENLDADVRLGRVMAKLDAETARRAVVGLQEVSMSWAGPLHAYFAAKGYHFVVSLYGKPFNNYMGVGLAVPLDAYEVTTSDISRLSDTVKFPQ--------------------------------------------------------------------------VKKKDKDFGILNPVVNVLKMPVSIWRKLTDYRPPSDEWQTARGRFNSILYATLTCKKTNAK---------------------------------------FGVCTYHMPCMFRTAADRRVMTIHAGIAAQYALNQSAGLPVVLMGDFNLKPGDAGHTLITTGDLDESHEAYPVMPEGYKGEPFNVKPAK--KMESAYARVNGEEPNFTNNAQIKDDEPFIDTLDYIFVTDDIDVVDVLELPHRDDVKGPFPAETEPSDHIMLAATIR 355
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: K8EZC0_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EZC0_9CHLO) HSP 1 Score: 225 bits (574), Expect = 1.160e-61 Identity = 153/457 (33.48%), Postives = 209/457 (45.73%), Query Frame = 2
Query: 365 DFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFNHRPVMVMHTSMVVKHLL---DLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFP-DRPGWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVK-GPFPSETEPSDHVLLAAEYRV 1720
+ RV TYNVLSSHLAEP+ F CDPK+L A RL+RV+ KL E+++ +++ LQEVS+ W+G H FF RGY V+ YG P N YMGV LA L YE VD+ R+SD W RK L V+ P+ + R A R P+D WE+AK RFN ++ + K +G+ +LG V TYHMPC+F + VM +H+++ + + + + ++ GDFN P Y+++T +L + +P G E P A+++S Y+EV G+EPDFTN AK++ FIDTLDYIF T + V PLKHR+EV GP+PSE EPSDHVLLAA+ V
Sbjct: 12 NIRVTTYNVLSSHLAEPTYFTSCDPKNLDALVRLERVQKKLSVEMEKRSIIGLQEVSMTWSGPLHAFFANRGYHVVSHLYGKPFNNYMGVLLAIPLDTYELSRVDVQRLSDCAKWPRKPKDLEEK-----------------------------GVVKRYVV----------------DPIVRMWRAA----------------------------RNARPQYPPQDDWELAKGRFNSIVYANVTHK-------------------------------QTGV--SLG------VSTYHMPCMFRNPKVMTLHSALAATYTMRESEKDGTKNSILMGDFNVKPIDGSYELLTTNNLDENDVFYPIPYEGTEYIVEPP--ARMVSCYKEVNGEEPDFTNYAKIKDDEPFIDTLDYIFVTENIRVDAVAPLKHRDEVTDGPYPSENEPSDHVLLAADVTV 354
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Match: A0A090M8K0_OSTTA (Endonuclease/exonuclease/phosphatase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M8K0_OSTTA) HSP 1 Score: 222 bits (566), Expect = 1.350e-60 Identity = 157/457 (34.35%), Postives = 200/457 (43.76%), Query Frame = 2
Query: 371 RVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGAVVCLQEVSILWAGEFHVFFMARGYAFVTANYGNPHNGYMGVALAWSLSKYEAVTVDITRVSDTRVWGRKSTPLPSSCPSPGGPPTTPVRRAPAPPTTVPAPASPNSVLTTIAAWTGTPSEGGTGGGEWGSPLKALMRLAGRGVKRPREEEXXXXXXXXXXXXXXXVSGRGREGEEPEDVWEMAKKRFNQAIFVRLRPKIVAAPAATVAGGNGAPNGAGTLAPNGTPANGSSGIRGTLGGPPVFCVGTYHMPCLFN---HRPVMVMHTSMVVKHLLDLACSNPLVIAGDFNFNPASECYKIVTQGDLSIDSPDFPDRP----GWEKNWSPATGAKLMSAYREVEGKEPDFTNNAKVEQWPRFIDTLDYIFHTPGLIATKVLPLKHRNEVKGPFPSETEPSDHVLLAAEYRV 1720
RV TYNVLSSHLA+P F CDP L A TRL+RV AKL E AV+ LQEVS+ WAG H +F +GY F+ + YG P N YMGV LA YE V DI+R+SDT + R P E G PL + L VK P + + + P W+ A+ RFN + L+ K S + F V TYHMPC+F R VMV+H M ++ L+ + P V+ GDFN P + ++T G+L ++P P G N P K+ SAY V G EP+FTNNA+++ FIDTLDYIF T + VL L HR+EVKGPFP+ TEPSDH++LAA V
Sbjct: 12 RVVTYNVLSSHLADPGYFTHCDPDDLRAETRLERVMAKLDAECAGRAVIGLQEVSMSWAGPLHAYFAKKGYTFILSLYGKPFNNYMGVGLAVPTDAYELVRSDISRLSDTVKFPRVK-----------------------------------------------PKEANFG------PLTPVYNLL---VKTP-----------------VGLWRKLTDYRPPMTEWDTARNRFNSILHATLKCK-------------------------------KSDVS--------FGVATYHMPCMFRTAADRRVMVIHAGMAAQYALNHSEGLPTVLMGDFNLKPGDPGHVLITTGELDTSIDEYPVMPEGYIGSPFNVKPQK--KMESAYARVNGAEPNFTNNARIKDDEPFIDTLDYIFVTDDVEVLDVLDLPHRDEVKGPFPAATEPSDHIMLAATVLV 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1556.3245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1556.3245.1 >prot_H-paniculata_contig1556.3245.1 ID=prot_H-paniculata_contig1556.3245.1|Name=mRNA_H-paniculata_contig1556.3245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=459bp MVDFRVATYNVLSSHLAEPSRFPECDPKHLHAPTRLQRVKAKLQEEVDRGback to top mRNA from alignment at H-paniculata_contig1556:6828..23018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1556.3245.1 ID=mRNA_H-paniculata_contig1556.3245.1|Name=mRNA_H-paniculata_contig1556.3245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16191bp|location=Sequence derived from alignment at H-paniculata_contig1556:6828..23018- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1556:6828..23018- >mRNA_H-paniculata_contig1556.3245.1 ID=mRNA_H-paniculata_contig1556.3245.1|Name=mRNA_H-paniculata_contig1556.3245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2754bp|location=Sequence derived from alignment at H-paniculata_contig1556:6828..23018- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |