mRNA_H-paniculata_contig15557.3242.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: D7FVU4_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU4_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 3.670e-138 Identity = 192/279 (68.82%), Postives = 231/279 (82.80%), Query Frame = 1
Query: 1 MADSGSKPLDYLLKRVSVLTRARRHGGKA-AAAASLVALFYLSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKGRGILDILIGKFYSLALTVGVQ 834
M+ GS LD +L +V LT ARR GGK AAAAS+VAL YL++V RQG+RP + RR+ HN+R+LRALA VIDRPYYPSWLTP+ H+N LG+ KRG V+KTREL+R WDGG FAMDW NRD QPDL AD PTLL+IHGLNGHS+EACVLY+M NA+ RGWR+VAMNHRGCGGT L SGWTYN A+TGDVR+AVSH+R RYP APL+A+G+SLGANLLVK+LGEEG++G RPLAGA+SVSNPWN EDNT+ASG+ +G++ ++GK YS AL GV+
Sbjct: 1 MSSIGSGALDRILSQVRALTNARRTGGKEKAAAASVVALVYLALVFRQGKRPKLVCRRSGHNVRVLRALAGVIDRPYYPSWLTPNAHVNCLLGYAKRGITVSKTRELIRCWDGGTFAMDWRNRDRDQPDLPADAPTLLVIHGLNGHSEEACVLYSMENAHKRGWRAVAMNHRGCGGTHLASGWTYNGAFTGDVRLAVSHVRNRYPEAPLYAIGYSLGANLLVKYLGEEGRNGFRPLAGAVSVSNPWNFEDNTMASGRAKGLVAAVMGKVYSWALATGVK 279
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A835YM36_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM36_9STRA) HSP 1 Score: 269 bits (687), Expect = 9.630e-85 Identity = 132/277 (47.65%), Postives = 185/277 (66.79%), Query Frame = 1
Query: 16 SKPLDYLLKRVSVLTRARRHGGKAAAAASLVALFYLSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKG---RGILDILIGKFYSLALTVGVQV 837
S P LL++ L R R+ A S+V L +L R+ RP + + T+ N R++ L ++ R Y PS TP+GH NS LG+ K P+ +KTREL+RTWDGG+FA+DW + +P+L AD P LL+IHG+NGHS+E V+ M A+ARGWR+ A NHRGCGGT L+S W YN A+TGD+R+A++++ R+P AP+ A +SLGANLLVK+LGEEG+HG PLA A+ VSNPW LE ++ + G LD ++G+ Y L LT+G+++
Sbjct: 2 SSPSSSLLEQFRTLPRRRQ---AKYAVPSIVLLGWLLSWARRIGRPDVRHADTARNRRIVAMLQTLLARRYVPSIFTPNGHFNSGLGYVKAAPKFSKTRELIRTWDGGNFALDWRDTGPGKPNLPADAPILLVIHGINGHSEEVYVVNAMAMAHARGWRAAAFNHRGCGGTELSSPWGYNGAFTGDIRLAINNLHHRFPGAPVMAAAYSLGANLLVKYLGEEGRHGCAPLAAAVVVSNPWTLEAKHVSGEQAAPHHGPLDWIVGRAYGLLLTLGLRM 275
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A6H5KMM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM3_9PHAE) HSP 1 Score: 218 bits (554), Expect = 2.920e-68 Identity = 107/157 (68.15%), Postives = 125/157 (79.62%), Query Frame = 1
Query: 1 MADSGSKPLDYLLKRVSVLTRARRHGGKA-AAAASLVALFYLSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMV 468
M+ GS LD +L RV LT ARR GGK AAAAS+VAL YL+VV RQG+RP + RR+ HN+R+LRALA V+DRPYYPSWLTP+ H+N LG+ KRG V+KTREL+R WDGG FAMDW NRD QPDL AD PTLL+IHGLNGHS+EACVLY+MV
Sbjct: 1 MSGIGSGALDRILSRVRALTNARRTGGKEKAAAASVVALVYLAVVFRQGKRPKLVCRRSGHNVRVLRALAGVVDRPYYPSWLTPNAHVNCLLGYAKRGITVSKTRELIRCWDGGTFAMDWRNRDRDQPDLPADAPTLLVIHGLNGHSEEACVLYSMV 157
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A7S3UUK3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUK3_HETAK) HSP 1 Score: 174 bits (441), Expect = 1.250e-47 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 196 RALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRT-WDGGHFAMDWSNRDASQPDLAAD----TPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKGRGILDILIGKFYSLALT 822
+AL +++ P+ P+ + + ++ G+ +R P + RE++ T G A+DW D + L+A TP LL+IHGLNGHS+E + Y M+ A+ +GWR+V NHRGCG TRL + YN A T D+R A +HIRRR P AP++A GFSLGANLLVK+LGEEG PLAGA +VSNPWN N + G +G YSLALT
Sbjct: 93 KALEELLEEPFKPNMFCLNQNASTIAGYLRRLPSITTRREMISTDSQGAQIALDWMEYDEAL--LSAPWGPCTPILLLIHGLNGHSNETYIRYMMLLAHRQGWRAVGFNHRGCGETRLYTPKPYNGACTLDLRAACAHIRRRVPGAPVYAAGFSLGANLLVKYLGEEGA--AAPLAGAAAVSNPWNFSKNGSVT---HGTTLTALG--YSLALT 297
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A0G4I441_9ALVE (Hydrolase_4 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I441_9ALVE) HSP 1 Score: 159 bits (401), Expect = 6.650e-42 Identity = 93/232 (40.09%), Postives = 138/232 (59.48%), Query Frame = 1
Query: 61 RARRHGGKAAAAASLVALFYLSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGT-RLTSGWT--YNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLED 747
R+R G K SL+ LF L++ R+ + + T N +LR + ++ R + S + SG I+S L K+ P++ + R+++ T+DG A+DW S PD + P ++ IHGLNGHS+E + + A+ + W +VA+N RGCGG +L S + Y+ A+T D+R AV +R R+P +PLF VGFSLGANLLVK+LGEEG+ + AIS NPWN E+
Sbjct: 12 RSRLPGAKT----SLLLLFGLALFWRRRVKVDSFFMPTKKNKTLLRRINYLL-RGFSTSLVASSGFISSTLVMMKKAPKMQRERQVIETFDGTKVALDWLFD--SDPDCPPNNPVVMAIHGLNGHSEEGYMRHLQHQAHKQHWHTVALNLRGCGGVHKLPSPGSPFYSGAFTEDIRRAVEVVRSRFPDSPLFMVGFSLGANLLVKYLGEEGEEAVGNVTAAISAGNPWNFEN 236
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A0G4FY60_VITBC (Hydrolase_4 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FY60_VITBC) HSP 1 Score: 155 bits (391), Expect = 2.390e-40 Identity = 93/228 (40.79%), Postives = 129/228 (56.58%), Query Frame = 1
Query: 91 AAASLVALFY-LSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRE---LVRTWDGGHFAMDWS-----NRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERP--LAGAISVSNPWNL 741
AAA +VAL L+V +R+ + + N R+L L +D Y+P+W+ + HI + +GF K P + K R+ L +DGG +DW D Q D TP +L IHG+NGHSDE+ + + + A +VA+N RGC G LTS +TY+AA T D+ V HI R+P PLF VGFSLG NL+VKFL EEG G + A++V+NPW+L
Sbjct: 48 AAAKVVALLLGLAVFVRRKVKVVAICHPSELNRRILHQLRRYLDA-YFPAWVGFNAHIATGIGFGKSAPNLEKLRQRETLGPLYDGGTICLDWHFAPHPPTDPHQEDAPPPTPIILCIHGINGHSDESYLRHMLSYALENNMHAVALNLRGCAGQPLTSPFTYSAACTSDLHYTVHHIHERFPHNPLFLVGFSLGGNLMVKFLSEEGHPGGAAELITAAVAVANPWDL 274
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A6H5KG51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG51_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.710e-38 Identity = 97/282 (34.40%), Postives = 124/282 (43.97%), Query Frame = 1
Query: 1 MADSGSKPLDYLLKRVSVLTRARRHGGKA-AAAASLVALFYLSVVLRQGRRPTITYRRTSHNLRMLRALAAVIDRPYYPSWLTPSGHINSALGFFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKGRGILDILIGKFYSLALTVGVQVGG 843
M+ GS LD +L RV LT ARR G K AAAAS+VAL YL+VV RQG+ + RR+ HN+R+LRALA V+DRPYYPSWLTP+ H+N LG+ KRG + VK+LGEEG++G RPLAGA+SVSNPWN EDNT+A G+ +G++ ++GK YSLAL GV++ G
Sbjct: 1 MSSIGSGALDRILSRVRALTNARRTGRKEKAAAASVVALVYLAVVFRQGK---LVCRRSGHNVRVLRALAGVVDRPYYPSWLTPNAHVNCLLGYAKRG-------------------------------------------------------------------------------------------------------------------------ITVKYLGEEGRNGLRPLAGAVSVSNPWNFEDNTMAGGRAKGLVAAVMGKVYSLALATGVKIRG 158
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: UPI001C71FBD8 (embryogenesis-associated protein EMB8 isoform X2 n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C71FBD8) HSP 1 Score: 150 bits (378), Expect = 2.270e-38 Identity = 91/238 (38.24%), Postives = 132/238 (55.46%), Query Frame = 1
Query: 154 TITYRRTSHNLRMLRALAAVIDRPYYPS-WLTPSGHINSA-LGFFKRGPRVAKTRELVRTWDGGHFAMDW-SNRDASQPDLAAD--------TPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKGRGILDILIGKFYSLALTVGVQ 834
++TY SH + + V+ Y + WL+ S HI + L F R P + R+L DGG A+DW +RD S L D TP ++++ GL S A + + N GW V NHRG GG +TS YNA +T D+R+ ++++ + YP APLFAVG S+GAN+LVK+LGE+G++ PLAGA+++ +PW+L R I L+ KFY ALT+G+Q
Sbjct: 140 SLTYNSCSHIYDSVVSKCRVLRGRYLATPWLS-SPHIQTVFLNFHGRPPAFSYRRQLFHATDGGTIALDWLMSRDVSGGALLMDSSISKNDTTPLIVVVPGLTSDSASAYIKHLAFNMAKHGWNVVVSNHRGLGGVSITSDCFYNAGWTEDIRLVINYLHKEYPEAPLFAVGTSIGANVLVKYLGEDGEN--TPLAGAVALCSPWDLLIGD------RFISRRLVQKFYDRALTIGLQ 368
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: UPI000C1D6D0C (embryogenesis-associated protein EMB8 isoform X3 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D6D0C) HSP 1 Score: 149 bits (376), Expect = 2.390e-38 Identity = 94/245 (38.37%), Postives = 134/245 (54.69%), Query Frame = 1
Query: 142 GRRPTITYRRTSHNLRMLRALAAVIDRPYYPS-WLTPSGHINSA-LGFFKRGPRVAKTRELVRTWDGGHFAMDW------------SNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNLEDNTLASGKGRGILDILIGKFYSLALTVGVQ 834
G R +TY +S R + + + Y + WL+ S HI ++ L FF R PRV R+L DGG FA+DW N+D S+ D TP +++I GL S + + N GW V NHRG GG +T+ YNA +TGDVR + ++ + YP APLF VG S+GAN+LVK+LGE+G++ P+AGA +VS+PW+L + R I L+ + Y ALT+G+Q
Sbjct: 60 GSRVVLTYNSSSDLYRGVVSKCRTLHGRYLATPWLS-SPHIQTSFLNFFGRPPRVCYKRQLFHASDGGTFALDWLRHFDVSGVFTHRNQDISKDDT---TPIVVMIPGLTSDSASPYMKHLAFNTAKHGWNVVVSNHRGLGGVSVTTDCFYNAGWTGDVREVIKYLHQEYPEAPLFVVGTSIGANVLVKYLGEDGEN--VPVAGAAAVSSPWDLLIGS------RFIRRRLLQRLYDRALTIGLQ 292
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Match: A0A6P6AB32_DURZI (embryogenesis-associated protein EMB8-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AB32_DURZI) HSP 1 Score: 148 bits (373), Expect = 3.960e-38 Identity = 77/187 (41.18%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 187 RMLRALAAVIDRPYYP-SWLTPSGHINSALG-FFKRGPRVAKTRELVRTWDGGHFAMDWSNRDASQPDLAADTPTLLIIHGLNGHSDEACVLYTMVNANARGWRSVAMNHRGCGGTRLTSGWTYNAAYTGDVRMAVSHIRRRYPAAPLFAVGFSLGANLLVKFLGEEGKHGERPLAGAISVSNPWNL 741
R L+AL + +PY P +T + H+ + FF+ P+V RE ++ DGG+ A+DW + D + L +D+P L+++ GL G S ++ V + + A +GWR V N RGCGG+ +T+ Y+A++ GD R V H+ RYP A L+AVG+SLGAN+LV++LG+E PL+GA+S+ NP+NL
Sbjct: 54 RFLQALHTTLRQPYNPFPLITWNRHVETIFASFFRSVPQVRLRRECLQVKDGGYVALDWVSGDDRR--LPSDSPILILLPGLTGGSQDSYVRHMLTKAKCKGWRVVVFNSRGCGGSPVTTPQFYSASFLGDTREVVKHVGARYPEANLYAVGWSLGANILVRYLGQESH--TCPLSGAVSLCNPFNL 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15557.3242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15557.3242.1 >prot_H-paniculata_contig15557.3242.1 ID=prot_H-paniculata_contig15557.3242.1|Name=mRNA_H-paniculata_contig15557.3242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp MADSGSKPLDYLLKRVSVLTRARRHGGKAAAAASLVALFYLSVVLRQGRRback to top mRNA from alignment at H-paniculata_contig15557:1692..5801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15557.3242.1 ID=mRNA_H-paniculata_contig15557.3242.1|Name=mRNA_H-paniculata_contig15557.3242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4110bp|location=Sequence derived from alignment at H-paniculata_contig15557:1692..5801+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15557:1692..5801+ >mRNA_H-paniculata_contig15557.3242.1 ID=mRNA_H-paniculata_contig15557.3242.1|Name=mRNA_H-paniculata_contig15557.3242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig15557:1692..5801+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |