mRNA_H-paniculata_contig15545.3241.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A6H5J8E2_9PHAE (6-pyruvoyltetrahydropterin synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8E2_9PHAE) HSP 1 Score: 174 bits (442), Expect = 6.240e-44 Identity = 85/136 (62.50%), Postives = 108/136 (79.41%), Query Frame = 1
Query: 10 RKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSEDLIRDPPLGVLRRVVGCCVRDGEDDRSNVN 417
RK+CK LNERFLCP +S + +T++ +QV +VCQDGATFVLP+DDCALLPL++STAEEL+H++F+RLLR F+L YLH RGVTEM ++V+E+P Q A Y GKIPPSED+I+DPP RRV GC ED +N N
Sbjct: 228 RKLCKGLNERFLCPMESDALDITLTGSQVVIVCQDGATFVLPRDDCALLPLVNSTAEELSHFLFSRLLREFTLPYLHSRGVTEMDVSVAELPRQEAIYRGKIPPSEDMIQDPPFRTARRVRGCF----EDSNNNNN 359
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A835ZBF3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF3_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.420e-29 Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPS-EDLIRDPPLGVLRRVVGCCVRDG 393
TR++CKELNERFLCP +S V+ IS QV M CQDG F P+ DCALLP++HSTAEELAHY++ RL+ F+ +YL LRGV + I VSE P Q A Y IP S L+ D P RR C+ G
Sbjct: 86 TRRLCKELNERFLCPQRSNVINSKISDGQVLMKCQDGCLFSFPESDCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRLRGVRTLEICVSEAPRQEAVYRQPIPSSLAGLLLDSPCA--RRPPRPCLEPG 213
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: W7TPC8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC8_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.140e-26 Identity = 68/157 (43.31%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSEDLIRDPPLGVLRRVVGCCVRDGEDDRSNVNINTK**QGRGRVGRHRGGDG 477
TR +CKELNERFLCPT+S V+ + + ++++ C+DGA FVLP DCA+LP++HSTAEELA Y + RL FS+D L RG+ + I V+E P Q YT ++ PPL L +G R+ + K GR VG +GGDG
Sbjct: 54 TRALCKELNERFLCPTRSDVIQIDVEGPRISLACEDGALFVLPTADCAMLPVVHSTAEELAQYFWHRLTTSFSVDRLLSRGIHTLQIMVAEAPRQEGCYTRRL-------TSPPLSFLDEGLG--------GRAAEVLKPKPCIGRNEVGDGQGGDG 195
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A4D9D0H6_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0H6_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.080e-25 Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSEDLIRDPPLGVLRRVVGCCVRDGEDDRSNVNINTK**QGRGRVGRHRGGDG 477
TR +CKELNERFLCPT+S V+ + + ++++ C+DGA FVLP DCA+LP++HSTAEELA Y + RL FS+D L RG+ + I V+E P Q YT ++ PPL L +G R+ + K GR VG +G DG
Sbjct: 59 TRALCKELNERFLCPTRSDVIQIDVEGPRISLACEDGALFVLPTADCAMLPVVHSTAEELAQYFWHRLTTSFSVDRLLSRGIHTLQIMVAEAPKQEGCYTRRL-------TSPPLSFLD--------EGVRGRAAEVLEPKPCIGRKEVGGGQGVDG 200
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A835ZGK8_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK8_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.970e-24 Identity = 52/97 (53.61%), Postives = 72/97 (74.23%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAA 297
TR++C EL++RFL P +S V+ ++ QV M CQDG+ F +P+ DCALLP++HSTAEELAHY++ RL+ F+ +YL +RGV M ITV+E P Q A
Sbjct: 60 TRRLCAELDQRFLYPQRSNVINSKVTDGQVMMKCQDGSLFTMPEADCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRMRGVRTMEITVAEGPRQEA 156
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A7R9UEV5_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEV5_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.610e-24 Identity = 52/108 (48.15%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSED 330
TR++CKELNERF+CP S VM + + QV + C+DGA F LP+ DCA+LPL+HSTAEE++ + + L++ F++++L RGVT + ITVSE +Q A Y +P ++
Sbjct: 117 TRRLCKELNERFICPMYSDVMEVELGEDQVVLRCEDGAYFSLPRGDCAVLPLVHSTAEEISRFFWCNLVQEFTIEWLKARGVTAVEITVSEAASQQAVYRRAVPEDDE 224
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A7R9VKT6_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKT6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.010e-21 Identity = 47/107 (43.93%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 7 TRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSE 327
T+++CKE+NE FLCP +S V+ ++ V ++C+DGA FV PK+DC +LP++H+T EELA Y++ ++L DYL RG+ M +TV E Q A + K+P E
Sbjct: 40 TKEVCKEINEHFLCPMRSDVIDISTEGESVKLICEDGAVFVFPKEDCYMLPIVHATTEELAVYLWGKILAGLDSDYLVKRGIHTMEVTVGEAVGQEAVFRMKVPDVE 146
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A067CJE7_SAPPC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJE7_SAPPC) HSP 1 Score: 98.6 bits (244), Expect = 2.730e-20 Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 QNTRKICKELNERFLCPTKSKVMTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATY 303
+ RKICKELNE F+ P KS V+T+ + T V + +DG F PK DC++LP++HS+AEELA Y+ RL+ F+++ L R V ++ I+++E NQ A+Y
Sbjct: 64 RRARKICKELNEHFIVPIKSDVLTIVVDDTNVQLTTEDGQKFSFPKSDCSILPIVHSSAEELAIYISGRLIEEFTMNELQARNVFKLEISIAEAENQLASY 164
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A8J5XEW6_DIALT (6-pyruvoyltetrahydropterin synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEW6_DIALT) HSP 1 Score: 99.8 bits (247), Expect = 4.760e-20 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 1
Query: 10 RKICKELNERFLCPTKSKVMTLTI--------------------------SPT-QVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIPPSE---DLIRDPPLGVLRRVVGCCVRDGEDD 402
RK+CKELNE +CPT+S V+ + +P QV + C+DGA+F +P+ D ALLP++HSTAEELAHY++ RL+R + L L R + M++TVSE P Q AT+T ++P E D + P V GC R E +
Sbjct: 72 RKLCKELNEHLICPTRSDVLLVRTVQLGGGGGVDGAVAVGASAEKEGASGAPLEQVCIECEDGASFSIPRSDVALLPIVHSTAEELAHYLWVRLVREYGLRALRARRIVAMSVTVSEAPYQRATFTCELPEDEAALDRMACGPCPQTLPVWGCSERTVEHE 232
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Match: A0A1Z5JDR4_FISSO (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDR4_FISSO) HSP 1 Score: 97.8 bits (242), Expect = 6.920e-20 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 16 ICKELNERFLCPTKSKVMTLTI---SPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRMFSLDYLHLRGVTEMAITVSEMPNQAATYTGKIP 318
+CKELNE FLCP S V+ + + T + + CQDG++F PK DCA+LP++H+T EE+A Y+++ +L+ + YL RG+ M +TV+E P Q AT+ +IP
Sbjct: 74 VCKELNEHFLCPMYSDVLKIESDDNTSTNIRITCQDGSSFSFPKQDCAMLPIVHATTEEIAIYLWSEILKGLNSQYLAQRGIHTMEVTVAEAPGQQATFRWEIP 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15545.3241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15545.3241.1 >prot_H-paniculata_contig15545.3241.1 ID=prot_H-paniculata_contig15545.3241.1|Name=mRNA_H-paniculata_contig15545.3241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp MTLTISPTQVTMVCQDGATFVLPKDDCALLPLLHSTAEELAHYVFTRLLRback to top mRNA from alignment at H-paniculata_contig15545:2719..5806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15545.3241.1 ID=mRNA_H-paniculata_contig15545.3241.1|Name=mRNA_H-paniculata_contig15545.3241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3088bp|location=Sequence derived from alignment at H-paniculata_contig15545:2719..5806- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15545:2719..5806- >mRNA_H-paniculata_contig15545.3241.1 ID=mRNA_H-paniculata_contig15545.3241.1|Name=mRNA_H-paniculata_contig15545.3241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig15545:2719..5806- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |