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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-14_001700.1 |
| Exons | 2 |
| Model size | 1329 |
| Cds size | 1185 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1554.3237.1 >prot_H-paniculata_contig1554.3237.1 ID=prot_H-paniculata_contig1554.3237.1|Name=mRNA_H-paniculata_contig1554.3237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=395bp
MHQHPESGGCRLSRSFIGMGIFALFVLSTIAPCTGRSLRGVSTRVLQVAG
EAERTYPDCLVLSIPLDAGDFAGVYTHTGRFNGDRPVYSNTDTRSTIFAQ
APSSTAVEWYMTSRSSVFFLSLASTVFEPVELPSPQAWDRNNDVMCPQTN
TSSCTVDLNISCVAWAIDYITAKPAPSPPEGAARNATVVTATPAPSASVT
PLNETGSSATLTSVPTPAPTEVGTMECKRLDIANAGDRTGVYLFNETLTN
DFPTYSITGLPGRIDQVFSVSMSACIFNWGLVNSTWVENRGALGLDATVR
QVFLEYLAGLDFEVGPDGCSVDVWFIALGGVTNLGSALGDTFFAVSGEQD
PSNVKSWVKFTPANATSRATIGTSSVVVVCDDNVDAGVMTQQFP* back to topmRNA from alignment at H-paniculata_contig1554:21909..24596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1554.3237.1 ID=mRNA_H-paniculata_contig1554.3237.1|Name=mRNA_H-paniculata_contig1554.3237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2688bp|location=Sequence derived from alignment at H-paniculata_contig1554:21909..24596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAACGAAGAACAGACAAGGAAGGACCGATACAAAACGATCTCTCACATC
ATGCACCAACATCCGGAATCAGGCGGATGCCGGCTTAGCCGTAGCTTTAT
TGGGATGGGTATTTTTGCTCTGTTCGTCCTTTCCACAATAGCTCCCTGCA
CAGGGAGATCCTTACGGGGAGTGTCTACGCGTGTGCTTCAGGTCGCGGGC
GAAGCGGAGCGAACGTATCCGGACTGTCTCGTTCTTTCGATACCACTGGA
TGCCGGAGACTTTGCTGGGGTCTACACGCACACCGGACGATTTAACGGTG
AGTGTAGTGCAGAGTGGTGGGGATGAATCAATATATTCTACATTCCTTGC
CCAGCATAACAGTTTAAAAGAACGCTGAAGCACGGATAATGTATAGTAAC
GGTAGGGCATGTACCAGTACAGACAGCCCTCGGGGGGAACTCAAATATAA
TAGCACATACTATATATTACTGACTGTTGCCTCAAGTTGAAAAATCAATA
CAAGAAGGGAGTTCGAGGGCAGGGAGGGGTGTTGTCACTTTTACACACTT
GAATCAACTAGGTACGTGAATCTCGGAAGTATCAAAATATGTATCATGCA
ACACAAAAAGAGGGAAATGATCCCCAGATTGATATGACACCACGAGAACT
CCCACGAGCTTGCAGTGGGACCCCGTGCGATGTGCATTTTTGGGACAACA
CGCTATATAAGATATTTGTCATGGAGCTCTGATGAAATTAATACCGTTCA
TTTTCCCCTCTTCGTCGCCATCACATGGATAAGGAGCAGGGGCTCGGTAT
AAGGCCGTCTGGTTCAGAGGGCCCTTTGGTCGCAGGGGATATTTCATCAG
TTGTAGTAAAAACAACAAAACAAATCAATTATTGACGGCAGGCGTGTAAG
GTGAAAGAGCATACTGATTTCATGATTGTACCACGATGAACATTTTGGGG
TTGCCGTGCACAGAGCGCAGGTGATGAGTGTACACGTTAGAGAAGAAAGT
GAAGACGATGGTCTCACTAGAGCGATAATATTATGAAGAGGCTGTATTGA
TGCTAATACATGAAACAGTAGACATGCAATACGCGAAGTCATCTTGTGCT
GACGAATCTACTTTATGATGTATCTATCGTCCATTCAAGATCGCACCCCT
TTATAGTAGACTTACGCCCGGTCCGCCAAAAATGCCCAGGAAGCGGATTT
CCGGATTCTAAAAAACTCTCGATGAATCTACGGATTGGAAATAGTGAACG
AGGCTCCGGCTATTTCCAATTCAAACAAGAAAAAAATAGAGTGTCATCAG
GTTTCGACGGATTCATGTGGATATCCGAAACATAAGTAAACATCGGAATT
GGGGTTTAAGGGTCTATTCTACATACGACACCCACGGGCGTATTGTTCAA
GTGCCGTCTGAGCGTTGTAACATGCGATCGAACGAACCGCTTATTTGCCA
ATTTTGTTTCAAATTAATGAACCTGTGTTTTGCGAAAAAACACATGAAAC
ATTTCGCATAGGGTATCTCTGCTCTAGACCTTTCCCCTCCCCCCTCCTCC
CTGATCATATTTCCCGTGGTTTTCAACTTACTCACTCTTTTCTCCATCAT
TGTCGTCACTCCTTGCTTTCACCACATCCTGTGCCCCATTTACACGTACG
AAGTAGGTGACCGTCCCGTCTACTCCAACACGGATACCAGAAGTACCATC
TTCGCTCAAGCTCCATCGTCGACGGCGGTGGAGTGGTACATGACAAGCCG
CTCCTCCGTCTTTTTTCTGAGCCTAGCCTCCACCGTCTTCGAACCCGTGG
AGTTGCCATCCCCGCAAGCCTGGGATCGCAACAATGACGTGATGTGCCCC
CAGACCAACACATCAAGCTGCACAGTCGACCTCAACATTAGTTGTGTAGC
CTGGGCCATTGATTATATCACGGCGAAGCCCGCGCCCAGTCCCCCTGAAG
GCGCAGCGAGAAACGCAACGGTAGTGACTGCGACGCCAGCGCCTTCGGCG
TCAGTGACACCCTTGAACGAAACCGGAAGTTCGGCTACTCTCACCTCGGT
CCCTACCCCAGCGCCCACTGAGGTGGGCACCATGGAGTGCAAGAGACTGG
ATATTGCCAACGCTGGAGACCGCACGGGGGTGTACCTGTTCAACGAGACC
CTCACCAACGACTTCCCAACCTACAGTATTACAGGCCTGCCCGGGCGCAT
CGACCAAGTTTTCTCGGTATCCATGAGTGCCTGCATCTTTAACTGGGGTC
TCGTCAACTCAACGTGGGTCGAAAACAGAGGCGCTTTGGGCCTCGATGCG
ACCGTGCGGCAGGTTTTCCTGGAGTACCTAGCAGGCCTCGACTTTGAAGT
TGGGCCCGACGGTTGCTCCGTCGACGTGTGGTTTATTGCCTTGGGCGGCG
TGACCAACTTGGGGTCTGCACTAGGGGACACTTTCTTCGCGGTTTCCGGG
GAGCAGGATCCCTCGAACGTGAAGTCTTGGGTGAAATTTACACCTGCCAA
TGCGACTTCAAGAGCTACGATCGGGACGAGCTCTGTGGTAGTTGTGTGTG
ACGATAACGTGGATGCGGGAGTGATGACCCAACAATTTCCTTGAAAGATC
CCAGGGATGTGTTGCGAAGGACGGGGGGGGCATGATTGCTCGGTGAAAAT
TGTTGCGCCAAGCGTTCTACCAGGGGAGTGGGTGGTGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1554:21909..24596+ >mRNA_H-paniculata_contig1554.3237.1 ID=mRNA_H-paniculata_contig1554.3237.1|Name=mRNA_H-paniculata_contig1554.3237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2370bp|location=Sequence derived from alignment at H-paniculata_contig1554:21909..24596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACCAACATCCGGAATCAGGCGGATGCCGGCTTAGCCGTAGCTTTAT
TGGGATGGGTATTTTTGCTCTGTTCGTCCTTTCCACAATAGCTCCCTGCA
CAGGGAGATCCTTACGGGGAGTGTCTACGCGTGTGCTTCAGGTCGCGGGC
GAAGCGGAGCGAACGTATCCGGACTGTCTCGTTCTTTCGATACCACTGGA
TGCCGGAGACTTTGCTGGGGTCTACACGCACACCGGACGATTTAACGATG
CACCAACATCCGGAATCAGGCGGATGCCGGCTTAGCCGTAGCTTTATTGG
GATGGGTATTTTTGCTCTGTTCGTCCTTTCCACAATAGCTCCCTGCACAG
GGAGATCCTTACGGGGAGTGTCTACGCGTGTGCTTCAGGTCGCGGGCGAA
GCGGAGCGAACGTATCCGGACTGTCTCGTTCTTTCGATACCACTGGATGC
CGGAGACTTTGCTGGGGTCTACACGCACACCGGACGATTTAACGGTGACC
GTCCCGTCTACTCCAACACGGATACCAGAAGTACCATCTTCGCTCAAGCT
CCATCGTCGACGGCGGTGGAGTGGTACATGACAAGCCGCTCCTCCGTCTT
TTTTCTGAGCCTAGCCTCCACCGTCTTCGAACCCGTGGAGTTGCCATCCC
CGCAAGCCTGGGATCGCAACAATGACGTGATGTGCCCCCAGACCAACACA
TCAAGCTGCACAGTCGACCTCAACATTAGTTGTGTAGCCTGGGCCATTGA
TTATATCACGGCGAAGCCCGCGCCCAGTCCCCCTGAAGGCGCAGCGAGAA
ACGCAACGGTAGTGACTGCGACGCCAGCGCCTTCGGCGTCAGTGACACCC
TTGAACGAAACCGGAAGTTCGGCTACTCTCACCTCGGTCCCTACCCCAGC
GCCCACTGAGGTGGGCACCATGGAGTGCAAGAGACTGGATATTGCCAACG
CTGGAGACCGCACGGGGGTGTACCTGTTCAACGAGACCCTCACCAACGAC
TTCCCAACCTACAGTATTACAGGCCTGCCCGGGCGCATCGACCAAGTTTT
CTCGGTATCCATGAGTGCCTGCATCTTTAACTGGGGTCTCGTCAACTCAA
CGTGGGTCGAAAACAGAGGCGCTTTGGGCCTCGATGCGACCGTGCGGCAG
GTTTTCCTGGAGTACCTAGCAGGCCTCGACTTTGAAGTTGGGCCCGACGG
TTGCTCCGTCGACGTGTGGTTTATTGCCTTGGGCGGCGTGACCAACTTGG
GGTCTGCACTAGGGGACACTTTCTTCGCGGTTTCCGGGGAGCAGGATCCC
TCGAACGTGAAGTCTTGGGTGAAATTTACACCTGCCAATGCGACTTCAAG
AGCTACGATCGGGACGAGCTCTGTGGTAGTTGTGTGTGACGATAACGTGG
ATGCGGGAGTGATGACCCAACAATTTCCTTGAGTGACCGTCCCGTCTACT
CCAACACGGATACCAGAAGTACCATCTTCGCTCAAGCTCCATCGTCGACG
GCGGTGGAGTGGTACATGACAAGCCGCTCCTCCGTCTTTTTTCTGAGCCT
AGCCTCCACCGTCTTCGAACCCGTGGAGTTGCCATCCCCGCAAGCCTGGG
ATCGCAACAATGACGTGATGTGCCCCCAGACCAACACATCAAGCTGCACA
GTCGACCTCAACATTAGTTGTGTAGCCTGGGCCATTGATTATATCACGGC
GAAGCCCGCGCCCAGTCCCCCTGAAGGCGCAGCGAGAAACGCAACGGTAG
TGACTGCGACGCCAGCGCCTTCGGCGTCAGTGACACCCTTGAACGAAACC
GGAAGTTCGGCTACTCTCACCTCGGTCCCTACCCCAGCGCCCACTGAGGT
GGGCACCATGGAGTGCAAGAGACTGGATATTGCCAACGCTGGAGACCGCA
CGGGGGTGTACCTGTTCAACGAGACCCTCACCAACGACTTCCCAACCTAC
AGTATTACAGGCCTGCCCGGGCGCATCGACCAAGTTTTCTCGGTATCCAT
GAGTGCCTGCATCTTTAACTGGGGTCTCGTCAACTCAACGTGGGTCGAAA
ACAGAGGCGCTTTGGGCCTCGATGCGACCGTGCGGCAGGTTTTCCTGGAG
TACCTAGCAGGCCTCGACTTTGAAGTTGGGCCCGACGGTTGCTCCGTCGA
CGTGTGGTTTATTGCCTTGGGCGGCGTGACCAACTTGGGGTCTGCACTAG
GGGACACTTTCTTCGCGGTTTCCGGGGAGCAGGATCCCTCGAACGTGAAG
TCTTGGGTGAAATTTACACCTGCCAATGCGACTTCAAGAGCTACGATCGG
GACGAGCTCTGTGGTAGTTGTGTGTGACGATAACGTGGATGCGGGAGTGA
TGACCCAACAATTTCCTTGA back to top
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