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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 954 |
| Cds size | 954 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1554.3236.1 >prot_H-paniculata_contig1554.3236.1 ID=prot_H-paniculata_contig1554.3236.1|Name=mRNA_H-paniculata_contig1554.3236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp
MKIDGGRVAVECKSHCKPDEGGVLHSIEMVLKSMIICGLCQERWILMPQA
PVGPSTVEAKLSQFADRALLSRLATKEDVLNEASAPTLGCIDREGCSVER
VAACASIDMLSKGTYNPLRHSSGLLEFLSAQENRSNSSIGPAKGPRGGST
KVASNRRVEISNDRRSNKSSLKSAIIKSTGGGSYMIRSKGPHQQQKSRNS
SRRSLSTQPTSAMLQTAVNMTNAMRGTPVSMQARLDDKLPLNAQKPERRE
VTLRYGQVLPSTSSTGHNGQLHGTTAPQPQGKSGSGSSKNSCIESMNIKH
SAPGGPSKVEGGGSQWA* back to topmRNA from alignment at H-paniculata_contig1554:18144..20045+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1554.3236.1 ID=mRNA_H-paniculata_contig1554.3236.1|Name=mRNA_H-paniculata_contig1554.3236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1902bp|location=Sequence derived from alignment at H-paniculata_contig1554:18144..20045+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATCGATGGGGGGAGAGTGGCGGTTGAGTGTAAGTCACACTGCAA
ACCCGACGAAGGTGGAGTTCTCCATTCAATCGAGATGGTTCTGAAATCAA
TGATAATCTGTGGACTATGTCAGGAGCGCTGGATTTTGATGCCACAGGCC
CCCGTGGGACCCTCTACGGTCGAAGCGAAGTTATCGCAGTTCGCGGATAG
GGCACTACTGAGTCGTCTGGCGACAAAAGAGGATGTGTTGAACGAAGCAA
GCGCGCCCACTTTGGGTTGTATTGACCGAGAAGGTTGCTCTGTGGAGAGA
GTCGCAGCGTGTGCAAGGTAACATACAGAGATGTTGAAAGGACCGGCTAT
TTCTGTGCATAAGGTATTTTGAAATACATACCGACCAATTTGGCGTTGAT
CAGGATATCAGACGCAGAACTGTGTGTATGCATGCATATGGAAGGACTAA
TGATGTCTCGAGCCCGCGACTTAAATGATCGGGTACCGAGGGTGGTCTCA
CAGGAGAAATTTTCCGTGTGACTCCATACGGCAATTTCTACGCGGAACAG
GCGTTTCACCTCAAGGCAGCCAGTGGCAACAAAGAGAACAAGAAAAATCA
CCACGTTCTAACCCGACCATATGCCCTGCATTGTTGTCCTGCTGCAGCAT
CGATATGCTCAGCAAAGGGACGTACAACCCCTTGAGACATTCCAGCGGGC
TTCTCGAATTTCTTTCTGCCCAAGAAAACCGGAGCAACAGTAGTATTGGG
CCCGCCAAAGGTCCACGTGGAGGTTCGACTAAAGTGGCCTCAAACCGGCG
CGTGGAGATATCCAACGACCGGAGGTCCAACAAAAGTAGCCTCAAATCGG
CGATAATCAAGAGCACCGGCGGTGGAAGCTATATGGTAAGACTCGTCAAA
TTGGTTAACAACTGTTTTCCCGCCCAGAACTGCACACATGGCCAGAGGCT
ACCTTGTGAATACCTTGTTGCGGATATTACAACGCCCCTCATTGTGGTGA
GGTTGACAATGCGCATAAAAGTATTAGGACGTTGTATGTACATTGTCACC
TCCCCACCACGTCCCAATACGTTGTATAAACACTGTTAACCTCACCGCAG
CGTGGACGTGGCGATATCCGCAACAAATACCTATGTCGACTTTATAGTCC
ACCACACGGTAACTCGGTGGGTTCAATTTTAAAGGATGCACGACTGTTTC
TTTGTGAAAATATTGAGGGAAAACCTTTAGGATGCAACAGAATTTCCCGT
GAAAGGGAGAAGCATACGACTTCCAAGCGCACACCGTCGTCTATTTCAAT
GTTGGCGGGCGAGTCGGACTGCTGGCCCACTGTGCAATAATAGAGGTCGA
GTAGTCCCAGCTTCGGGCCTTGCGTATCGACCGATTAATCGACTCAAGCA
TTGAGAAAATTGTATTATTACGAGTTCACATCCTATGCAGCTCGAATGAG
GGTTCGATAAATGTCGAAATTGACCTTGTCTGTGTTCCATGAACAACGAG
CAGATTCGATCTAAAGGACCACACCAGCAACAGAAGTCACGAAACTCCAG
CAGGCGGTCCCTATCTACTCAACCAACATCAGCAATGCTGCAAACGGCTG
TTAATATGACCAATGCGATGAGGGGGACACCTGTATCAATGCAGGCAAGA
CTAGACGACAAGCTTCCCCTCAACGCGCAGAAACCAGAACGAAGAGAAGT
AACCCTGCGCTATGGTCAGGTGCTGCCTTCGACGAGCAGCACGGGACACA
ACGGACAGCTACATGGAACCACTGCTCCTCAGCCGCAGGGAAAGAGCGGT
AGCGGTAGTTCGAAAAACAGCTGCATAGAATCTATGAATATAAAGCATAG
TGCTCCGGGTGGTCCATCGAAGGTTGAGGGGGGGGGGTCGCAATGGGCTT
GA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1554:18144..20045+ >mRNA_H-paniculata_contig1554.3236.1 ID=mRNA_H-paniculata_contig1554.3236.1|Name=mRNA_H-paniculata_contig1554.3236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1908bp|location=Sequence derived from alignment at H-paniculata_contig1554:18144..20045+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATCGATGGGGGGAGAGTGGCGGTTGAGTGTAAGTCACACTGCAA
ACCCGACGAAGGTGGAGTTCTCCATTCAATCGAGATGGTTCTGAAATCAA
TGATAATCTGTGGACTATGTCAGGAGCGCTGGATTTTGATGCCACAGGCC
CCCGTGGGACCCTCTACGGTCGAAGCGAAGTTATCGCAGTTCGCGGATAG
GGCACTACTGAGTCGTCTGGCGACAAAAGAGGATGTGTTGAACGAAGCAA
GCGCGCCCACTTTGGGTTGTATTGACCGAGAAGGTTGCTCTGTGGAGAGA
GTCGCAGCGTGTGCAAGATGAAGATCGATGGGGGGAGAGTGGCGGTTGAG
TGTAAGTCACACTGCAAACCCGACGAAGGTGGAGTTCTCCATTCAATCGA
GATGGTTCTGAAATCAATGATAATCTGTGGACTATGTCAGGAGCGCTGGA
TTTTGATGCCACAGGCCCCCGTGGGACCCTCTACGGTCGAAGCGAAGTTA
TCGCAGTTCGCGGATAGGGCACTACTGAGTCGTCTGGCGACAAAAGAGGA
TGTGTTGAACGAAGCAAGCGCGCCCACTTTGGGTTGTATTGACCGAGAAG
GTTGCTCTGTGGAGAGAGTCGCAGCGTGTGCAAGCATCGATATGCTCAGC
AAAGGGACGTACAACCCCTTGAGACATTCCAGCGGGCTTCTCGAATTTCT
TTCTGCCCAAGAAAACCGGAGCAACAGTAGTATTGGGCCCGCCAAAGGTC
CACGTGGAGGTTCGACTAAAGTGGCCTCAAACCGGCGCGTGGAGATATCC
AACGACCGGAGGTCCAACAAAAGTAGCCTCAAATCGGCGATAATCAAGAG
CACCGGCGGTGGAAGCTATATGCATCGATATGCTCAGCAAAGGGACGTAC
AACCCCTTGAGACATTCCAGCGGGCTTCTCGAATTTCTTTCTGCCCAAGA
AAACCGGAGCAACAGTAGTATTGGGCCCGCCAAAGGTCCACGTGGAGGTT
CGACTAAAGTGGCCTCAAACCGGCGCGTGGAGATATCCAACGACCGGAGG
TCCAACAAAAGTAGCCTCAAATCGGCGATAATCAAGAGCACCGGCGGTGG
AAGCTATATGATTCGATCTAAAGGACCACACCAGCAACAGAAGTCACGAA
ACTCCAGCAGGCGGTCCCTATCTACTCAACCAACATCAGCAATGCTGCAA
ACGGCTGTTAATATGACCAATGCGATGAGGGGGACACCTGTATCAATGCA
GGCAAGACTAGACGACAAGCTTCCCCTCAACGCGCAGAAACCAGAACGAA
GAGAAGTAACCCTGCGCTATGGTCAGGTGCTGCCTTCGACGAGCAGCACG
GGACACAACGGACAGCTACATGGAACCACTGCTCCTCAGCCGCAGGGAAA
GAGCGGTAGCGGTAGTTCGAAAAACAGCTGCATAGAATCTATGAATATAA
AGCATAGTGCTCCGGGTGGTCCATCGAAGGTTGAGGGGGGGGGGTCGCAA
TGGGCTTGAATTCGATCTAAAGGACCACACCAGCAACAGAAGTCACGAAA
CTCCAGCAGGCGGTCCCTATCTACTCAACCAACATCAGCAATGCTGCAAA
CGGCTGTTAATATGACCAATGCGATGAGGGGGACACCTGTATCAATGCAG
GCAAGACTAGACGACAAGCTTCCCCTCAACGCGCAGAAACCAGAACGAAG
AGAAGTAACCCTGCGCTATGGTCAGGTGCTGCCTTCGACGAGCAGCACGG
GACACAACGGACAGCTACATGGAACCACTGCTCCTCAGCCGCAGGGAAAG
AGCGGTAGCGGTAGTTCGAAAAACAGCTGCATAGAATCTATGAATATAAA
GCATAGTGCTCCGGGTGGTCCATCGAAGGTTGAGGGGGGGGGGTCGCAAT
GGGCTTGA back to top
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