prot_H-paniculata_contig1553.3231.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1553.3231.1
Unique Nameprot_H-paniculata_contig1553.3231.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length696
Homology
BLAST of mRNA_H-paniculata_contig1553.3231.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.820e-38
Identity = 131/308 (42.53%), Postives = 159/308 (51.62%), Query Frame = 0
Query:  402 GPRAKPGLEVSMSLAGLKINLVRRPAPGEKAVIGAYFPGKTTAREGMHVGGQQPWLERCRIMAMDLRAGGVREPSDGWGSPPPEHRAWASILSLTAGAPPVSVSRPGSYRDR------GGGS-----------------NSSTASTKTGGAASGRNSSAERASAKLTFREVDGSKIDDAGARQPPPYLICRPPPDGRAVPTTGAGSVPPTATSARGSAGSTIGGVCGRKASSDRDRNPKSSDQPIAAKFLELKAGGRAGGAAGTGKSASLVVSMGQVETWALGGAATRWWARLGPKPGVLPESTSSST 686
            GPRAKPGLEVS S AG+ +NLVRR A GE   +G   PG        H+G    WL+RCR+ A  L AGGVREPSDGWGSPPP+HR W S+ SLT G PP  ++  G    R       GG                  + S A+   GG     +     ASA       +G     +G +   P+L+CRP           A +  P A    G  GS + G  G +AS     +P          FLE+K  GRAG AAGTG  ASL++ MG+VE WALGGAATRW  RLGP+PGVLPES  + T
Sbjct:  130 GPRAKPGLEVSFS-AGVTVNLVRRNARGE---VG---PG--------HLG---LWLQRCRVSATGLHAGGVREPSDGWGSPPPQHRGWLSVSSLTVGTPPSPLTPSGVVGSRFAETVAAGGXXXXXXXXXXXXXXXXXXSGSRATNNMGGTG---HQFFRPASAAAPAIAENGK----SGQQHYRPWLVCRP----------AAVAAAPAAPGRSG--GSKVSGG-GSRASHRLGNDPLGGKYD---NFLEVKVAGRAGSAAGTGSCASLLMRMGEVEGWALGGAATRWVERLGPQPGVLPESKKTDT 396          
BLAST of mRNA_H-paniculata_contig1553.3231.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.100e-32
Identity = 98/272 (36.03%), Postives = 121/272 (44.49%), Query Frame = 0
Query:   75 ETSRQHPLPRWLKWLLRRLKVQLMDVTIRYESVGMCPLQGAPPSAVEVTLGSLEVRPVSLQGASAWFKGQIKAQRRGHQYREELMLQGLAVRIEPLDDPAASSGTINSNQKVFLLEPTSVSAQAFVVSRLPPRSTPLRPGMRSGRVGTAHATIRAISLSGEAWRTIRPSFLEDLPNLMRTWTQGDRTSLTNEPVTVNATEDSMTLAWGVVEELMRLADMHSGAGVGFGDMGVGNDYSDEE---------------EGDSEQWYDAFGSQEES 331
            +  RQ P+PRWLKW+LRRLKV+L DVT+RYESVGMCPLQGA P+AVEVTLGSLEV+PVSLQGASAWFK Q++A+ +  QYRE                                                                                                     G++ +  NEPVT+NATED+M L WGV EE++RLADM+SGA                                +G  ++WYDAFGS+ ES
Sbjct:  248 KAGRQRPMPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRQVQAEHKSLQYRE-----------------------------------------------------------------------------------------------------GEKVTGANEPVTLNATEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFES 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1553.3231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K463_9PHAE1.820e-3842.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LME5_ECTSI2.100e-3236.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1553contigH-paniculata_contig1553:6926..14269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1553.3231.1mRNA_H-paniculata_contig1553.3231.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1553 6798..19739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1553.3231.1 ID=prot_H-paniculata_contig1553.3231.1|Name=mRNA_H-paniculata_contig1553.3231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=696bp
MLGSFVAKLEGVTIVMRGDVGAMTASSTNPRSQEQDSAGNDHRVYSADSV
AQFVDGMSGGLDSGARMGATHSKSETSRQHPLPRWLKWLLRRLKVQLMDV
TIRYESVGMCPLQGAPPSAVEVTLGSLEVRPVSLQGASAWFKGQIKAQRR
GHQYREELMLQGLAVRIEPLDDPAASSGTINSNQKVFLLEPTSVSAQAFV
VSRLPPRSTPLRPGMRSGRVGTAHATIRAISLSGEAWRTIRPSFLEDLPN
LMRTWTQGDRTSLTNEPVTVNATEDSMTLAWGVVEELMRLADMHSGAGVG
FGDMGVGNDYSDEEEGDSEQWYDAFGSQEESNEDDRRRNSSDANPSPSSL
PPSAATITSTVGNPSAETASSATAAGADATAADASTTTATVNRSALDRFT
LGPRAKPGLEVSMSLAGLKINLVRRPAPGEKAVIGAYFPGKTTAREGMHV
GGQQPWLERCRIMAMDLRAGGVREPSDGWGSPPPEHRAWASILSLTAGAP
PVSVSRPGSYRDRGGGSNSSTASTKTGGAASGRNSSAERASAKLTFREVD
GSKIDDAGARQPPPYLICRPPPDGRAVPTTGAGSVPPTATSARGSAGSTI
GGVCGRKASSDRDRNPKSSDQPIAAKFLELKAGGRAGGAAGTGKSASLVV
SMGQVETWALGGAATRWWARLGPKPGVLPESTSSSTRTGNMNDTV*
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