prot_H-paniculata_contig155.3214.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig155.3214.1
Unique Nameprot_H-paniculata_contig155.3214.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length478
Homology
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A6H5L263_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L263_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 2.280e-98
Identity = 197/477 (41.30%), Postives = 253/477 (53.04%), Query Frame = 0
Query:   27 ATVVVYGSNDSLRRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEMEPP---------TLPNDQSAEIN-------RHLRGNSLEKDLLPMESGASDIAMETIDDASATGI----------ENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPVELQSSSNSGGGGXXXXNGRGGPSTADHTANGADTNNAVRSASTRSPRQATSFFSAHFVVGSGGLGVAYSSLSSGVEDGRDQEDAGGTSTSPGRGGVEGVGRVTGDRLPLLLNSRGARSNGGSMQSSSPV 477
            A ++VY  N+   RF DVPS   FGPRIP+EGF G LQLA+P+++ACS +  P         T  N+ + E++          R +S     +P+         E ++  S T            E  +P+A L+SRS   DP  CTFE KVLNAQ AG+ +VIV+D ++E  FKMG ++     HP VEIPLVLV+  SGLAL+ L+E + DT GPE+ VDNTDP+  +FVT++                     V+TLHRY+RRYE L+ G+  R M LPEVLQLPEV VEE S+L G+SCPVCLE Y+ GDKLR LPCQH FHAGCITPWLTQ QR+CPMCKDPV L                                          +P  ++S  S           +   ++     DG ++ D             +G G   GDRLPLL NSRGA   GGS+Q +SPV
Sbjct:   29 AVILVY--NEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPLSTTAVASATAVNEAAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVSTTAAATXXXXXAAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQGAGFSMVIVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVSHASGLALKALIETASDTRGPEVYVDNTDPF-GMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTN-RPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVG--------------------------------------LAPPTSSSPSSXXXXXXXXAAVITAPAMQPAHADGVERGD-------------DGAG---GDRLPLLSNSRGAPIGGGSIQDTSPV 447          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A1D1UID0_RAMVA (RING-type domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UID0_RAMVA)

HSP 1 Score: 101 bits (252), Expect = 1.050e-19
Identity = 90/315 (28.57%), Postives = 127/315 (40.32%), Query Frame = 0
Query:   35 NDSLRRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEMEPPTLPNDQSAEINRHLRGNSLEKDLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGES-CPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
            ND++ +FA +P++  FGP IP EG  GYL LA+P + AC  + PP   N+    I                                           +L+ R       +C F++KVLNAQ AGY   IV++   +    M  + + D     + IP V V+ + G+ L      SP        VDN  PY  V                          VLT+    + + D       R   LP   QL ++ + +  K  G   C +CLE ++ GDK R LPC H +H  CI PWL   +R CP+CK  V
Sbjct:   31 NDTMYKFAAMPAS--FGPEIPGEGVEGYLILAEP-LTACQYVLPPPDTNNTYDWI-------------------------------------------LLIKRG------QCDFDRKVLNAQRAGYAAAIVYNNGSQTLVPMSGSREKD-----IGIPAVFVSYRDGIFLSADFLYSP-------LVDN--PYYVVITPEYPVISLNAILLPFAIVVGICFFVLTMVLVAKYWRD---RRRRRRHRLPRS-QLKKLTIRKFKKGEGNDVCAICLEEFEEGDKCRVLPCHHQYHCKCIDPWLLNNRRVCPVCKRKV 275          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A7S1X741_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X741_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 3.090e-19
Identity = 95/376 (25.27%), Postives = 157/376 (41.76%), Query Frame = 0
Query:   21 FAVPTQATVVVYGSNDSLRRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEMEPP-----------TLPN-----DQS-AEINRHLRGNSLEKDLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPL------------------------------PEVLQLPEVLVEEESKLVG----ESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCK 345
            +A+P  ++VV+   N +L  FAD+PS   FGPR+P EG  G+L +A P+  AC  +              T P+     D+S A    H+  + + +  +  ES  S+ ++ +             P   L++RS    P+ CTF+ KV +AQ AG    IV+D   E    M    + +DP     IP V V++++G+ ++++++E              +  VN+                          V++   ++R  +D +  S    +P+                              P   +   +  EE + L G    ++C +CL+ Y+AG KLR LPC H FH  CI  WL   +  CP+CK
Sbjct:   12 WAMPGMSSVVIQTGNFTLDPFADMPSD--FGPRLPPEGISGFLVVADPED-ACQPLRNSLKDLDALSRNGTFPSKRDSGDRSGATALNHIDPDWVVQARVSAESNPSEASLSS------------HPWIALITRSQGLQPN-CTFDAKVRHAQEAGAVAAIVYDDTLEALVIMSKPPEAEDPR----IPSVFVSKRTGMVIKRMMKEG-------------ETIVNITAL---DAIWGSMLMSALAGVLAVCVVISTFYFIRSGDDGMTASEIAALPVIIHDEEHSGGLGCGRLRFGGSRSAEKDGKAPAESEQQRLDEEEHAGLFGGGTRKTCAICLDDYEAGQKLRVLPCAHRFHVDCIDQWLMMRRPLCPICK 351          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A4S2MB54_OPIFE (RING-type domain-containing protein n=3 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2MB54_OPIFE)

HSP 1 Score: 95.5 bits (236), Expect = 2.120e-17
Identity = 63/203 (31.03%), Postives = 89/203 (43.84%), Query Frame = 0
Query:  146 CTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
            CTFE+K+  A+  GY   IVF++  +  F M S T       PV IP V++ +  G  + +     PD +  EI       Y N    I                          H   RR          R +   ++ +LP     +     G+ C +CLE Y+ GD+LR LPC+HV+H  CI PWL +G+R CP+CK PV
Sbjct:   95 CTFEEKITAAERGGYVAAIVFNHLSDDIFPMSSKTGF-----PVNIPAVMIGRSDGRIILERFVSPPDAYIVEI-------YANHKTDITWYVVPVLSVLGLFLLGVLCMCAFRWHDQRRRRLR-------RCLTSRQLKRLPSTKFIKGQTPDGK-CVICLEDYEDGDRLRTLPCEHVYHTRCIDPWLLKGRRVCPICKRPV 277          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A6I9VBG3_BACDO (E3 ubiquitin-protein ligase RNF13 isoform X2 n=11 Tax=Bactrocera TaxID=27456 RepID=A0A6I9VBG3_BACDO)

HSP 1 Score: 95.1 bits (235), Expect = 3.680e-17
Identity = 88/335 (26.27%), Postives = 134/335 (40.00%), Query Frame = 0
Query:   17 GTCLFAVPTQATVVVYGSNDSL--RRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEME-PPTLPNDQSAEINRHLRGNSLEKDLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
            G  LF     A V+VY   +SL   ++ D+P+   FGP +P  G   +   A  D +AC  +  PP      +A+             ++ +E G               GI                    CTFEKKV NAQAAG+   IVF+   +   +M +          + IP V V   +G+ L      +PD     I V N +   N+   +                       +   R +RR+           +P   + +LP +   +   L  ++C +CL+ +  GDKLR LPC+H +H+ CI PWLT+ +R CP+CK  V
Sbjct:   19 GLSLFTQEAAAHVLVYRRINSLLIEQYNDLPAQ--FGPSLPANGIKVFAIPAAKDEYACGPVPGPPRKEYPNNAKF------------VIIIERGG--------------GIN-------------------CTFEKKVRNAQAAGFDAAIVFNNDGDDLEQMSAKNSSG-----IYIPAVFVGHTTGINLMTFY--TPDV----ILVINDELPFNINTQLILPFSILIGLCFLIMIFYMIYKCVREERRLRRHR----------LPKNMLKKLPILKYTKNCDLSQDTCVICLDEFAEGDKLRVLPCKHPYHSHCIDPWLTENRRVCPICKRKV 285          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A7S2BQG6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG6_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.950e-17
Identity = 72/226 (31.86%), Postives = 100/226 (44.25%), Query Frame = 0
Query:  133 VLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPH--PPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVL----TLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGE---SCPVCLETYQA-GDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
            VLV RS   D   CTF +KV NAQ AG   VIV D +++      S T  +  H    + IP V VT K+G+ L+ ++  S +     I   N   +   F+T+                       L     +H   RR   L          +   + + + L     +L GE   SC +CLE  +   D ++ LPCQH FHA CIT WLT+ + TCP+CK PV
Sbjct:   29 VLVFRSPIEDASTCTFSQKVGNAQVAGAAGVIVADQRRDSELIQMSRTQKEIEHGDDSILIPSVFVTTKTGIDLKNILAGSREIVSVLISQQNHSSWNIPFITLVSSFGLILALCSSMIICAGMVTRLHHRPDIHAQNRRGNRLQNRVRGHRATITLDINVVDALPTVTPELCGEGPCSCAICLEDLRGTSDSVKQLPCQHKFHAHCITEWLTRWKHTCPLCKHPV 254          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A0K8UXP0_BACLA (E3 ubiquitin-protein ligase RNF13 n=2 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8UXP0_BACLA)

HSP 1 Score: 94.4 bits (233), Expect = 9.530e-17
Identity = 92/351 (26.21%), Postives = 141/351 (40.17%), Query Frame = 0
Query:    7 RLRPRNVLL-----LGTCLFAVPTQATVVVYGSNDSL--RRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEME-PPTLPNDQSAEINRHLRGNSLEKDLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPE-IEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
            R+R + +LL      G  LF     A V+VY   +SL   ++ D+P+   FGP +P  G   +   A  D +AC  +  PP      +A+             ++ +E G                   GM                CTFEKKV NAQAAG+   IVF+   +   +M +          + IP V V   +G+ L          + PE I V N +   N+   +                       +   R +RR+           +P   + +LP +   +   L  ++C +CL+ +  GDKLR LPC+H +H+ CI PWLT+ +R CP+CK  V
Sbjct:    4 RMRSKWMLLELFAFCGLSLFTQEAAAHVLVYRRINSLLIEQYNDLPAQ--FGPSLPANGIKVFAIPAAKDEYACGPVSGPPRKEYPNNAKF------------VIIIERGG------------------GM---------------NCTFEKKVRNAQAAGFDAAIVFNNDGDDLEQMSAKNASG-----IYIPAVFVGHTTGINLMTF-------YTPEVILVINDELPFNINTQLILPFSILIGLCFLIMIFYMIYKCVREERRLRRHR----------LPKNMLKKLPILKYTKNCDLSQDTCVICLDEFAEGDKLRVLPCKHPYHSHCIDPWLTENRRVCPICKRKV 285          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: A0A8J9YDX9_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9YDX9_9NEOP)

HSP 1 Score: 92.4 bits (228), Expect = 1.410e-16
Identity = 85/340 (25.00%), Postives = 131/340 (38.53%), Query Frame = 0
Query:   12 NVLLLGTCLFAVPTQATVVVYGSN---DSLRRFADVPSTKGFGPRIPKEGFGGYLQLAKPDIFACSEMEPPTLPNDQSAEINRHLRGNSLEKDLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPV 348
             + LLG        +  V+VY  +        F DVP++  FGP +  EG  G+L   +P+       +PP  P + + +                                            VL++R        C+FEKK+ NAQAAG+   IV +        M +   D      + IP V V+  SG+ L    EE   T+G  I V+   P+ N+   +                       +   R  RR+           +P   + ++P     +      ++C +CL+ YQ G++LR LPC H +HA C+ PWLTQ +R CP+CK  V
Sbjct:    6 QICLLGFLGLITFIRGNVIVYTQDLPHKITEEFLDVPAS--FGPELTLEGLRGFLVTGEPEDGCTILKKPPVDPENFTGKW------------------------------------------VVLLARY------NCSFEKKIRNAQAAGFDCAIVHNVNSSELETMYANNSDG-----ITIPSVFVSDISGIILS---EEYVYTNGYYIMVNGDVPF-NINTHLLLPFAVVVVLCLVVILIFMIVKCIKDRRRARRHR----------LPNRALRKIPTCKFSKGDPY--DTCAICLDDYQEGERLRVLPCAHAYHAACVDPWLTQNRRVCPVCKRRV 274          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: D8TB16_SELML (RING-type domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TB16_SELML)

HSP 1 Score: 89.7 bits (221), Expect = 1.460e-16
Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = 0
Query:  146 CTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHG-----PEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRL------MPLPEVLQLPEVLVE--EESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCK 345
            C F++K+LNAQ AG+  VIV++  +EG   +  +   DD    V IP V V++ +G   + L+E S          P IE          F+++                      VLT   ++RRY    +GS   L      M   EV  LP V+ +   + +   ++C +CLE Y++G+KLR LPC H FHA C+  WLT  +  CP+CK
Sbjct:   49 CKFDEKILNAQDAGFSAVIVYN-NEEGHDLISMSGSSDD----VRIPAVFVSKSAG---ETLLEYSKQIGARCYILPAIENTAWSVMAVSFISL-----------------LAVTAVLTTFLFVRRYRLRHLGSRLLLLRDSYGMSAREVKALPTVIFKCLGDGQGTSDTCAICLEDYESGEKLRVLPCHHDFHAACVDQWLTTRRPFCPVCK 236          
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Match: D8QVB4_SELML (RING-type domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QVB4_SELML)

HSP 1 Score: 90.1 bits (222), Expect = 1.910e-16
Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = 0
Query:  146 CTFEKKVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKSGLALQKLVEESPDTHG-----PEIEVDNTDPYVNVFVTINXXXXXXXXXXXXXXXXXXXXXVLTLHRYMRRYEDLLVGSPPRL------MPLPEVLQLPEVLVE--EESKLVGESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCK 345
            C F++K+LNAQ AG+  VIV++  +EG   +  +   DD H    IP V V++ +G   + L+E S          P IE          F+++                      VLT   ++RRY    +GS   L      M   EV  LP V+ +   + +   ++C +CLE Y++G+KLR LPC H FHA C+  WLT  +  CP+CK
Sbjct:   83 CKFDEKILNAQDAGFSAVIVYN-NEEGHDLISMSGSSDDVH----IPAVFVSKSAG---ETLLEYSKQIGARCYILPAIENTAWSVMAVSFISL-----------------LAVTAVLTTFLFVRRYRLRHLGSRLLLLRDSYGMSAREVKALPTVIFKCLGDGQGTSDTCAICLEEYESGEKLRVLPCHHDFHAACVDQWLTTRRPFCPVCK 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig155.3214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L263_9PHAE2.280e-9841.30RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1D1UID0_RAMVA1.050e-1928.57RING-type domain-containing protein n=1 Tax=Ramazz... [more]
A0A7S1X741_9CHLO3.090e-1925.27Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A4S2MB54_OPIFE2.120e-1731.03RING-type domain-containing protein n=3 Tax=Opisth... [more]
A0A6I9VBG3_BACDO3.680e-1726.27E3 ubiquitin-protein ligase RNF13 isoform X2 n=11 ... [more]
A0A7S2BQG6_9STRA7.950e-1731.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0K8UXP0_BACLA9.530e-1726.21E3 ubiquitin-protein ligase RNF13 n=2 Tax=Bactroce... [more]
A0A8J9YDX9_9NEOP1.410e-1625.00(lesser marbled fritillary) hypothetical protein n... [more]
D8TB16_SELML1.460e-1631.92RING-type domain-containing protein (Fragment) n=1... [more]
D8QVB4_SELML1.910e-1631.92RING-type domain-containing protein (Fragment) n=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 303..344
e-value: 1.6E-8
score: 44.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 302..345
e-value: 3.5E-13
score: 49.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 303..345
score: 12.77
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 291..360
e-value: 2.1E-19
score: 70.5
IPR003137PA domainPFAMPF02225PAcoord: 132..204
e-value: 1.3E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 299..356
coord: 145..207
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 299..356
coord: 145..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 259..477
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.598
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 286..351
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 236..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig155contigH-paniculata_contig155:21569..37075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig155.3214.1mRNA_H-paniculata_contig155.3214.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig155 21409..38538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig155.3214.1 ID=prot_H-paniculata_contig155.3214.1|Name=mRNA_H-paniculata_contig155.3214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=478bp
MVTETSRLRPRNVLLLGTCLFAVPTQATVVVYGSNDSLRRFADVPSTKGF
GPRIPKEGFGGYLQLAKPDIFACSEMEPPTLPNDQSAEINRHLRGNSLEK
DLLPMESGASDIAMETIDDASATGIENGMPAAVLVSRSLPSDPDRCTFEK
KVLNAQAAGYKLVIVFDYKQEGPFKMGSATDDDDPHPPVEIPLVLVTQKS
GLALQKLVEESPDTHGPEIEVDNTDPYVNVFVTINFTMLMVVLGFLMALL
TCGSMMVLTLHRYMRRYEDLLVGSPPRLMPLPEVLQLPEVLVEEESKLVG
ESCPVCLETYQAGDKLRGLPCQHVFHAGCITPWLTQGQRTCPMCKDPVEL
QSSSNSGGGGSSSSNGRGGPSTADHTANGADTNNAVRSASTRSPRQATSF
FSAHFVVGSGGLGVAYSSLSSGVEDGRDQEDAGGTSTSPGRGGVEGVGRV
TGDRLPLLLNSRGARSNGGSMQSSSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain