prot_H-paniculata_contig1547.3198.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1547.3198.1
Unique Name	prot_H-paniculata_contig1547.3198.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	134

Homology

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: D8LBD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD6_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 3.420e-51
Identity = 102/132 (77.27%), Postives = 109/132 (82.58%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTGNLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQG 132
            +GH+GVVNSCSISRTGNL+AS SDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDN+IK+FDVRK D+A+TM GH DT             XXXXXXXXXXXXX   PFAN NRLEK F G
Sbjct:  141 KGHSGVVNSCSISRTGNLMASASDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNEIKVFDVRKLDIAYTMTGHTDTXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PFANQNRLEKTFHG 271

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A6H5JPD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD3_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.780e-48
Identity = 97/123 (78.86%), Postives = 101/123 (82.11%), Query Frame = 0

Query:   10 CSISRTGNLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQG 132
            CSISRTGNLVAS SDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDN+IK+FDVRK D+A+TM GH DTV            XXXXXXXXXXXXX  RPF N NRLEK F G
Sbjct:    3 CSISRTGNLVASASDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNEIKVFDVRKLDIAYTMTGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXX-XRPFVNQNRLEKTFHG 124

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: S2JES3_MUCC1 (Uncharacterized protein n=6 Tax=Mucoraceae TaxID=34489 RepID=S2JES3_MUCC1)

HSP 1 Score: 132 bits (333), Expect = 7.310e-35
Identity = 80/134 (59.70%), Postives = 101/134 (75.37%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGA 133
            +GHTG+VNSC ++R G  LV SGSDD  VK+WD R + +V  F N+YQVT+VC S     + S G+DNDIK++DVRK  LA+TM GH DTV+ G+SLSPDG +XXXXXXXXXXXXX  +PFA  +R  K+F+GA
Sbjct:  148 RGHTGIVNSCQVARRGAELVVSGSDDCTVKIWDSRAKEAVNTFENEYQVTSVCFSDAGDMIYSAGLDNDIKVWDVRKNQLAYTMKGHMDTVS-GMSLSPDGNNXXXXXXXXXXXXXXXKPFAAADRCLKIFEGA 280

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A0B7NWX3_9FUNG (PH domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NWX3_9FUNG)

HSP 1 Score: 130 bits (328), Expect = 1.010e-32
Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGA 133
            +GH+G+VNSC ++R G  LV SGSDD  VK+WD R + +V+ F N+YQVT+VC S     + S G+DND+K++DVRK  LA+TM GH DT+  G+SLSPDG + XXXXXXXXXXXX  +PFA  +R  K+F+GA
Sbjct:  147 RGHSGIVNSCQVARRGAELVVSGSDDCTVKIWDNRTKEAVSTFENEYQVTSVCFSDAGDMIYSAGLDNDVKVWDVRKNQLAYTMKGHMDTIA-GMSLSPDGNNLXXXXXXXXXXXXXXKPFAAADRCLKIFEGA 279

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A8H7QVT5_9FUNG (PH domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7QVT5_9FUNG)

HSP 1 Score: 129 bits (324), Expect = 3.600e-32
Identity = 79/134 (58.96%), Postives = 99/134 (73.88%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGA 133
            +GH+ +VNSC +SR G  LV SGSDD  VK+WD R + +V  F N YQVT+VC S     + S G+DNDIK++DVRK  LA+TM GH DTV+ G+SLSPDG +XXXXXXXXXXXXX  +PFA  +R  K+F+GA
Sbjct:  146 RGHSSIVNSCQVSRRGAELVVSGSDDCTVKIWDSRTKEAVNTFENDYQVTSVCFSDAGDMIYSAGLDNDIKVWDVRKNQLAYTMKGHMDTVS-GMSLSPDGNNXXXXXXXXXXXXXXXKPFAAADRCLKIFEGA 278

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: R7TUX4_CAPTE (Uncharacterized protein n=2 Tax=Capitella teleta TaxID=283909 RepID=R7TUX4_CAPTE)

HSP 1 Score: 124 bits (312), Expect = 7.110e-32
Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGAQ 134
            +GH   VNSC  +R G +++ SGSDDG VK WD R +  +  F + YQVTAV  +   +Q+++GGIDN+IKIFD+RK ++ + M GH DTVT G+ LSPDG +             DVRP+A   R  K+FQG Q
Sbjct:  138 KGHRSFVNSCDSARRGPHMICSGSDDGTVKYWDARKKVPLESFQSTYQVTAVSFNDTAEQIIAGGIDNEIKIFDLRKNEILYRMRGHTDTVT-GMKLSPDGSYLLTTSMDNTVRIWDVRPYAPQERCVKIFQGNQ 271

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: T1FN91_HELRO (Uncharacterized protein n=2 Tax=Helobdella robusta TaxID=6412 RepID=T1FN91_HELRO)

HSP 1 Score: 124 bits (311), Expect = 1.020e-31
Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGAQ 134
            +GH   VN+C +SR G   + SGSDDG V++WD R + S+    + +QVT+VC S   +QV+SGGIDND+K++D+RK D+ + M GH DTVT GL LSPDG + XXXXXXXXXXXX  RP+A   R  K+FQG Q
Sbjct:  140 KGHQTFVNACDVSRRGPQYLCSGSDDGTVRIWDSRRKTSIQTLQSTFQVTSVCFSDTSEQVISGGIDNDLKVWDLRKNDVVYAMKGHMDTVT-GLRLSPDGSYLXXXXXXXXXXXXXXRPYAPQERCVKIFQGNQ 273

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A8H7BQ84_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BQ84_9FUNG)

HSP 1 Score: 124 bits (311), Expect = 1.220e-31
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGA 133
            +GHTGVVNSC+++R G   VAS SDDG ++LWD R + +V  F ++YQVT+VC S     V SGG+DN+IK++D+RK  +A+T+ GH DT+  GLSLSPD   XXXXXXXXXXXXX V+PFA  +R  KVF GA
Sbjct:  147 KGHTGVVNSCAVARRGPETVASASDDGSIRLWDSRDKDAVQIFEDKYQVTSVCFSDAGDMVYSGGLDNEIKVWDLRKKGVAYTLTGHLDTIA-GLSLSPDXXXXXXXXXXXXXXXXXVKPFAPADRCVKVFDGA 279

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A5S6QU68_TRIMR (BPL/LPL catalytic domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QU68_TRIMR)

HSP 1 Score: 125 bits (315), Expect = 4.070e-31
Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 0

Query:    1 QGHTGVVNSCSISRTG-NLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGAQ 134
            +GHT  VNSC ++R G  ++ SGSDDG +K+WD R R  V  F N+YQVTAV  +   +QV++GGIDND+    +RK  +A+ M GH DTVT GLSLSPDG H             DVRPFA + R  +VFQG Q
Sbjct:  120 KGHTSFVNSCHLARRGPRVICSGSDDGTIKVWDQRKRDYVHSFDNKYQVTAVTFNDTTEQVIAGGIDNDLXXXXLRKGVVAYGMFGHLDTVT-GLSLSPDGSHVLSNSMDCSVRIWDVRPFAPEVRCVRVFQGNQ 253

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BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Match: A0A058ZW78_EUCGR (Uncharacterized protein n=5 Tax=malvids TaxID=91836 RepID=A0A058ZW78_EUCGR)

HSP 1 Score: 120 bits (301), Expect = 1.720e-30
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 0

Query:    3 HTGVVNSCSISRTGN-LVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDGKHXXXXXXXXXXXXXDVRPFANDNRLEKVFQGAQ 134
            H+  VNSC  SR G  LV SGSDDG  KLWD R R ++  F ++YQ+TAV  S    ++ +GGIDND+K++D+RK ++  T+ GH DT+T G+ LSPDG +             D+RP+   NR  K+ +G Q
Sbjct:  127 HSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDIRKGEVTMTLQGHQDTIT-GMQLSPDGSNLLTNAMDCKLCIWDMRPYTPQNRCVKIMEGHQ 258

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1547.3198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBD6_ECTSI	3.420e-51	77.27	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JPD3_9PHAE	1.780e-48	78.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
S2JES3_MUCC1	7.310e-35	59.70	Uncharacterized protein n=6 Tax=Mucoraceae TaxID=3...	[more]
A0A0B7NWX3_9FUNG	1.010e-32	56.72	PH domain-containing protein n=1 Tax=Parasitella p...	[more]
A0A8H7QVT5_9FUNG	3.600e-32	58.96	PH domain-containing protein n=1 Tax=Mucor plumbeu...	[more]
R7TUX4_CAPTE	7.110e-32	46.67	Uncharacterized protein n=2 Tax=Capitella teleta T...	[more]
T1FN91_HELRO	1.020e-31	54.81	Uncharacterized protein n=2 Tax=Helobdella robusta...	[more]
A0A8H7BQ84_9FUNG	1.220e-31	58.21	Uncharacterized protein n=1 Tax=Apophysomyces ossi...	[more]
A0A5S6QU68_TRIMR	4.070e-31	50.37	BPL/LPL catalytic domain-containing protein n=1 Ta...	[more]
A0A058ZW78_EUCGR	1.720e-30	44.36	Uncharacterized protein n=5 Tax=malvids TaxID=9183...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 60..74 score: 28.14 coord: 103..117 score: 36.58 coord: 19..33 score: 40.13
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 35..73 e-value: 0.013 score: 24.7 coord: 76..116 e-value: 1.1E-4 score: 31.5 coord: 2..32 e-value: 0.042 score: 23.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 48..73 e-value: 0.036 score: 14.9 coord: 2..32 e-value: 5.2E-7 score: 30.3 coord: 82..116 e-value: 2.6E-6 score: 28.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 1..41 score: 14.385
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 94..118 score: 11.177
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..134 e-value: 8.5E-41 score: 141.7
None	No IPR available	PANTHER	PTHR44006	FAMILY NOT NAMED	coord: 2..134
None	No IPR available	PANTHER	PTHR44006:SF1	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	coord: 2..134
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 1..125 score: 21.357
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1547	contig	H-paniculata_contig1547:373..1371 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1547.3198.1	mRNA_H-paniculata_contig1547.3198.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1547 373..1371 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1547.3198.1 ID=prot_H-paniculata_contig1547.3198.1|Name=mRNA_H-paniculata_contig1547.3198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
QGHTGVVNSCSISRTGNLVASGSDDGFVKLWDPRVRRSVAEFMNQYQVTA
VCLSRDDQQVMSGGIDNDIKIFDVRKADLAFTMPGHNDTVTVGLSLSPDG
KHLLSNSMDKTVRMWDVRPFANDNRLEKVFQGAQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020472	G-protein_beta_WD-40_rep
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf