prot_H-paniculata_contig15467.3195.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig15467.3195.1
Unique Name	prot_H-paniculata_contig15467.3195.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	124

Homology

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BLAST of mRNA_H-paniculata_contig15467.3195.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.360e-52
Identity = 83/123 (67.48%), Postives = 103/123 (83.74%), Query Frame = 0

Query:    1 MRGPANLYITLIGFLVSAAMFFHFFVDAHRALMVTFVLLGARVVTEYVVAALNPFRRKFGMVKKMDNMPASATIYITLCALGFALHGDAGVIGDYICRPYIGFLGILNKLLNRFQISTIDYFS 123
            MRGPANLYITL G++ SA++FFHFFVD  +AL +TFVLLGARVVT+Y+VAALNP R +FGM KK+DNMP SA IY+ L +LGF  HG+AG++GD+ C+P+I FLG+LNK LN FQ +TI YFS
Sbjct:  313 MRGPANLYITLAGYVSSASVFFHFFVDPQQALTITFVLLGARVVTDYIVAALNPVRWRFGMSKKLDNMPISAVIYLLLASLGFIFHGNAGLVGDFACKPFIAFLGLLNKGLNHFQATTITYFS 435

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15467.3195.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15467.3195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FJ41_ECTSI	1.360e-52	67.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 56..123
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..26
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 7..26
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 31..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15467	contig	H-paniculata_contig15467:2465..4354 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15467.3195.1	mRNA_H-paniculata_contig15467.3195.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig15467 558..6087 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig15467.3195.1 ID=prot_H-paniculata_contig15467.3195.1|Name=mRNA_H-paniculata_contig15467.3195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MRGPANLYITLIGFLVSAAMFFHFFVDAHRALMVTFVLLGARVVTEYVVA
ALNPFRRKFGMVKKMDNMPASATIYITLCALGFALHGDAGVIGDYICRPY
IGFLGILNKLLNRFQISTIDYFS*