mRNA_H-paniculata_contig15451.3190.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15451.3190.1
Unique NamemRNA_H-paniculata_contig15451.3190.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.410e-83
Identity = 134/206 (65.05%), Postives = 155/206 (75.24%), Query Frame = 3 
Query:  129 MAP--KLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAYNNAK 740
            MAP   LTLTYFDFAG AEP+RMALA++G  WEDKR++  EF ALKP LP+ QLPILEV  KVLPQS AQLRYVGKLAGLYP D LEAA  DA VD V DNHM L PT+  KD+  +MEMR++   +FL  WLGN+EK L  AGG YF G KLSIGD+ VV RL+W K G LDGIP + VD+YPLLSAL+E V +EP IA Y+  +
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQER 206
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 1.470e-78
Identity = 121/200 (60.50%), Postives = 149/200 (74.50%), Query Frame = 3 
Query:  129 MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAY 728
            M PKL L+YFD   L EP+R+ALA+SG  WEDKR+++EEF A+KP+LP+ QLP LEV   ++PQS AQ+RY+GK+ GLY  D +EAAF DA ++ VID H HLRPT+  +D A K+EMRK   +N+L  WLGN+E+ LK AGG YF G KLSIGD+ VV RL W K G LDGIP T VDD+PLLSALV+ V SE KI  Y
Sbjct:    1 MGPKLILSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKY 200
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.900e-73
Identity = 120/200 (60.00%), Postives = 144/200 (72.00%), Query Frame = 3 
Query:  129 MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAY 728
            MAPKL L YFD AG AEPIR AL    LEWEDKRLTREEFGALKP+LP+ Q+P+L +D   L QS A LRYVGKL GL PSDDL AA  DA +DCV D H+++RP+ M KDEA KMEMR D A NF+ KWL NMEK L    G +F  +K+++ D+++ CRL   + GVLDGIP T  D YP L A+ + V SEPK+AA+
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAF 199
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 8.750e-66
Identity = 106/204 (51.96%), Postives = 143/204 (70.10%), Query Frame = 3 
Query:  129 MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAYNNAK 740
            MAP + LTYF+FA L EP+R+ALA SG+EW D R+  E++  LKPTLP++Q+P+LEVD  V+PQS A LRYVGK+  LYP+D ++AAF D+  D V D   ++R  +  KD   K ++RKD  E  L  WL N+EK LK AGG YF G+KLSIGD+ VV RL W   G  +G+P+T +D+ PL+S+LV+ V +EP+I AY   +
Sbjct:    1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEER 203
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 5.470e-64
Identity = 109/201 (54.23%), Postives = 139/201 (69.15%), Query Frame = 3 
Query:  129 MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDD-YPLLSALVELVTSEPKIAAY 728
            MAPKL LTYFD  G AEPIR AL  SG EWEDKRLT EEFG +KP+LP+ QLP+LEVD   LPQS   LRYVGKL GL+PSDDLEAA  DA +D  +D ++++RP    KD+A ++EM  D A N++ KWL N+EK L    G+YF   K+S+ D+++  RL   + G  +G+P T  D  YP L+AL + +  EPKIAA+
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFA-EKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAF 200
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.590e-63
Identity = 106/205 (51.71%), Postives = 140/205 (68.29%), Query Frame = 3 
Query:  129 MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLD-GIPATCVDDYPLLSALVELVTSEPKIAAYNNAK 740
            MAP + LTYFD A L E +R+ALA SG+EW D R+T EE+  LKPTLP++Q+P+LEVD  V+PQ+ A LRYVGK+  LYP+D ++AAF D+  D V D H H+R     KD   K ++ KD  E  L  WL N+EK LK AGG YF G+KLSIGD+ VV RL W   G  D  +P+  ++++PLLS+LV+ V +EP+I AY   +
Sbjct:    1 MAP-MKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEER 204
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 2.460e-51
Identity = 92/196 (46.94%), Postives = 130/196 (66.33%), Query Frame = 3 
Query:  147 LTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGV-YFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAYN 731
            L+YFDF G+AEPIR+A AV G+++ED R  RE++  LKP  P+  +P L + D+V  QSNA LRY GKLAGLYP+D +EA  VD  VD + D  +H++PT+  +DE  KMEMRK  AE  L KWLG   K++++ G   Y VG+ L+I DL +   +     G+LDGIP T  + +P ++AL+E V ++ K+ A+ 
Sbjct:    5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFE 200
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.180e-50
Identity = 91/196 (46.43%), Postives = 129/196 (65.82%), Query Frame = 3 
Query:  141 LTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAY 728
            +TLTYFD  G AE IR+A  V G+ ++D+R++R+EF  +K  LP  QLPIL VDD+V PQS A LRY GK+ GLYPSD + AA VDA +DC+ D    +RP++   +   K+ MRK+ +E  L  WL  +E+ L++AG  +FVG +++I DLV+  R+ W + GVL GIP T + ++  + A  E V S PK+  Y
Sbjct:    4 ITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDY 199
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.470e-45
Identity = 77/153 (50.33%), Postives = 105/153 (68.63%), Query Frame = 3 
Query:  282 LPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAYNNAK 740
            +P+LEVD  V+PQS A LRYVGK+  LYP+D ++AAF D+ VD V D H ++R  +  KD   K ++RKD  E  L  WL N EK LK AGG YF G+KLSIGD+ VV RL W   G  +G+P+T ++++PLLS+LV+ + +EP+I AY   +
Sbjct:    1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGR 153
[Close]
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Match: A0A7S2SNE8_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNE8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.360e-43
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3 
Query:  126 TMAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHEQLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNHMHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNKLSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAYNNA 737
            T  P L L+YFD  G AE IR+A AV  +E+ED+RL RE F   KP LP   LP L + DK   QSNA LRY GKLAGLYP+D LEA  VD  +D V D    LRP+   +D+  K+ MRK+F EN   +++  +E  ++   G + VG+K++I DLV+      F  G LDGIP    D+Y  +S++ + V    ++ A+N++
Sbjct:    2 TAHPSLKLSYFDGKGRAEAIRLAFAVGKIEFEDERLAREAFIKRKPDLPFGSLPTLSIGDKQFAQSNALLRYAGKLAGLYPADALEALKVDQILDAVEDIQGALRPSFFEQDKEKKLSMRKEFMENAFPRYVSGIESLVE---GKWAVGDKMTIADLVLYQLKDTFTSGFLDGIPKNAFDEYSKISSVADAVGLNAEVKAWNDS 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15451.3190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B1N8E7_9PHAE1.410e-8365.05Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E6_9PHAE1.470e-7860.50Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
A0A6H5KRV2_9PHAE1.900e-7360.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHF0_ECTSI8.750e-6651.96Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
B1N8E8_9PHAE5.470e-6454.23Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
D8LK37_ECTSI1.590e-6351.71Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A061SAH2_9CHLO2.460e-5146.94Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
D7FPV3_ECTSI1.180e-5046.43Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
A0A6H5JAZ7_9PHAE3.470e-4550.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SNE8_9STRA4.360e-4343.63Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15451contigH-paniculata_contig15451:1175..5498 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score155.6
Seed ortholog evalue2.5e-35
Seed eggNOG ortholog946362.XP_004994854.1
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K04097
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko01100,ko05204,map00480,map00590,map00980,map00982,map01100,map05204
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs3A52M@33154,KOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1279
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15451.3190.1prot_H-paniculata_contig15451.3190.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15451 1699..5370 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929236.5713456-UTR-H-paniculata_contig15451:1174..16981622929236.5713456-UTR-H-paniculata_contig15451:1174..1698Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15451 1175..1698 -
1691480782.059476-UTR-H-paniculata_contig15451:1174..16981691480782.059476-UTR-H-paniculata_contig15451:1174..1698Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15451 1175..1698 -
1622929236.6742964-UTR-H-paniculata_contig15451:5370..54981622929236.6742964-UTR-H-paniculata_contig15451:5370..5498Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15451 5371..5498 -
1691480782.1263914-UTR-H-paniculata_contig15451:5370..54981691480782.1263914-UTR-H-paniculata_contig15451:5370..5498Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15451 5371..5498 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929236.585912-CDS-H-paniculata_contig15451:1698..18751622929236.585912-CDS-H-paniculata_contig15451:1698..1875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 1699..1875 -
1691480782.0692568-CDS-H-paniculata_contig15451:1698..18751691480782.0692568-CDS-H-paniculata_contig15451:1698..1875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 1699..1875 -
1622929236.6001034-CDS-H-paniculata_contig15451:2176..22401622929236.6001034-CDS-H-paniculata_contig15451:2176..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 2177..2240 -
1691480782.0767612-CDS-H-paniculata_contig15451:2176..22401691480782.0767612-CDS-H-paniculata_contig15451:2176..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 2177..2240 -
1622929236.6156073-CDS-H-paniculata_contig15451:2817..28581622929236.6156073-CDS-H-paniculata_contig15451:2817..2858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 2818..2858 -
1691480782.0843594-CDS-H-paniculata_contig15451:2817..28581691480782.0843594-CDS-H-paniculata_contig15451:2817..2858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 2818..2858 -
1622929236.6287472-CDS-H-paniculata_contig15451:3465..35811622929236.6287472-CDS-H-paniculata_contig15451:3465..3581Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 3466..3581 -
1691480782.0978866-CDS-H-paniculata_contig15451:3465..35811691480782.0978866-CDS-H-paniculata_contig15451:3465..3581Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 3466..3581 -
1622929236.643901-CDS-H-paniculata_contig15451:4359..44521622929236.643901-CDS-H-paniculata_contig15451:4359..4452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 4360..4452 -
1691480782.1053329-CDS-H-paniculata_contig15451:4359..44521691480782.1053329-CDS-H-paniculata_contig15451:4359..4452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 4360..4452 -
1622929236.657194-CDS-H-paniculata_contig15451:5234..53701622929236.657194-CDS-H-paniculata_contig15451:5234..5370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 5235..5370 -
1691480782.1129858-CDS-H-paniculata_contig15451:5234..53701691480782.1129858-CDS-H-paniculata_contig15451:5234..5370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15451 5235..5370 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15451.3190.1

>prot_H-paniculata_contig15451.3190.1 ID=prot_H-paniculata_contig15451.3190.1|Name=mRNA_H-paniculata_contig15451.3190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MAPKLTLTYFDFAGLAEPIRMALAVSGLEWEDKRLTREEFGALKPTLPHE
QLPILEVDDKVLPQSNAQLRYVGKLAGLYPSDDLEAAFVDATVDCVIDNH
MHLRPTLMAKDEALKMEMRKDFAENFLVKWLGNMEKNLKKAGGVYFVGNK
LSIGDLVVVCRLLWFKMGVLDGIPATCVDDYPLLSALVELVTSEPKIAAY
NNAKVTIQ*
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mRNA from alignment at H-paniculata_contig15451:1175..5498-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15451.3190.1 ID=mRNA_H-paniculata_contig15451.3190.1|Name=mRNA_H-paniculata_contig15451.3190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4324bp|location=Sequence derived from alignment at H-paniculata_contig15451:1175..5498- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAAGGTAATGTTCCGAGTACCCAAGGTGCCTCGGATTTCACGCGCCAC
AGCATACCACAAGCGTTCCCTCCCTCCTCATCTCAATACACCCAAGCACA
CAGCACTGAGATTAAAGTTAGTCACACCATGGCTCCGAAGTTGACCCTGA
CCTACTTCGACTTCGCTGGATTGGCCGAACCTATTCGAATGGCGTTGGCG
GTATCTGGTCTTGAGTGGGAGGACAAGAGACTGACACGAGAGGAGTTCGG
CGCTCTCAAACCCAGTGAGTATGTCCTTGATTACAGTCTGTACCTGAATA
AACGAGATGTGAACATTGCTCTTCATACGTGGGGTCGTTGTCGTTCGGTA
CTGATATAGTATCGTCTTCACTGAATGTACATGATACAGGCGGAATCCTA
TCGGCCTCTGTTTGCCAGAGATGCTCAACTGAGAGGATTCTTGTTTGTCA
ATATTCAGTACCAAGGAATGTTTTCGGACCCATTCGAGTCAGGGCCTACA
ATGTCCGCCCAGCGCTTCTTCTTCTGTCACCACAAACTCTGGAACTCCCC
CCACATCCCCCACATCCGACCAGTCCCCAACTCAAGATTTGGAAGTGCTG
TAATGAGTGTACGACACGTGAAGGCGTCAAGGATCCCTCTGGCGTCATCA
TACTGCTTGAAAGTCAAGGATTGTTGCGGTAGTATTTAGCACACATACGA
GGTCTGAGGGGCGGGATCATCTTCCGTACTCTGAAGAGGCATCAGTCTGT
TCACAAACAGTGATATGCATCACTAACAATTTGGATACCGCAAGGACATG
CAACTAACTGGTTGCATCCCTCTATTAGAACTAAAGCTTTTTGGATATCA
ATGTTCGGCCAACTTTGCTCGCGGTACTTTTCGAGCGATGGCTTACGGAA
TGTATGTTCGTGGAATGCTTTTTTCCATGAGATGACCAGACAACAGAAAA
TGCAACCACAAAATCAGGCATGATAATTATGTTTATTTCCTCAGTTTCTG
ATTCTTGATGTCTCGGCCCGTTTGATGTACCCCCTTGATTTCGCAGCTCT
TCCGCACGAACAACTGCCCATCCTGGAAGTGGACGACAAGGTTCTACCTC
AGAGTAATGCACAGCTCCGCTACGTGGGCAAGCTCGCTGGTATGCATAAC
TCGAGAACATTTGTCCTCACTACACCATTGAATCCCACACAAATTCGCTC
CATTACCCGCCAGCGGCTCGTTGGGCACGAGAGGGATGACGGATGGCGGC
CAGGATTTCTCCTGGAAAATGATTTTTATAAAATTGAAGTTGTGTTCCTG
GAATCACGGTCATGTCGAAAGTAATCGCTCTTTGGGCTGTGTAAGCTCGA
TAAATCTTTTCGTGCAGATTCTATGAGCCAATAGTCATGATTTCTGCTCA
TCTGTTGGATATTTCCTAGGCTCCTGTAGCCCATCGATGTCTAGAATGAT
CAAAGAGGATTTTATACAACTTCATTGCAGGTCCCGTCTAGGAGAACATA
TGTGAGTGAGACAAAGGAGGGCGTTGACCCTCCAGCCTGACACGGGCACC
GTAGCCGGCGATTCGGCTGCACCAATATACAGACAGACCCGAACCAGACC
GACAGGAACATAATTATATATAACTGTCAGATCTATTCCAAAAATGCGTA
CAGCAGATATCCTAGCATGGCATCCTAATAGTCGATCTCTTACGTCGATG
GGAGAGCACACTCGAACATCATCTGCATTAGAAACATGTAAAAAATATTT
TATTATATGGAATCCAGTTTCCGTTAGCGGCCAAGTAGGGATGCTTCATG
GTGTACTGAAAATTATGTCGCAATGCGTCACCTTGCCCTATCCCCTGACT
TTGGGCAGCTTACTGTGACAACTATATAACTGCTGGTGACTGTTTATATT
GTTGATATCTTCGACAGGTCTGTATCCCAGCGATGACCTCGAGGCAGCGT
TCGTCGACGCGACGGTAGATTGTGTGATCGACAACCACATGCACCTCCGG
CCTACGCTTATGGCGAAGGATGAGGCCTTGAAGGTATTTTTCCATCTCTT
GTGATTGTAGCAATTTTTTGCGGCATTCAGGTTAGCATCTCTAGTCAACA
TGTTTCTAGTGCTGTAGAATTTCTCCTCATCCACTCTGGTTCCCGGAAAG
AAAGGAGCATCCGTCTCTTTATAGCTGGCCAATTATGCGTTTATTCGTAT
CTGGGTAAATCATTGCCGACGGTTTGTCCCTCAGCCGCGCCCCTATCGCC
TTTGTATCTATTCCAAAATGCCACCTGTTGGTTGAATTGGGACAGTTGAA
GTCTGCCGTCCCGAATGAAATACCTCGCCGTGCTTTTGTGTCCAAACCCG
CACTCGCCACTCGTCTCACTTTTTCTCGCTTGTCTTTGAAATTTTTCTTC
TACGGCAACCTCATTTTAGATTGCGAGCGCTAGAATCTCTTGTGCTCACA
ATTAAGGGGTTTGAGGTCGCCTTGATCGCGAACGCTCGAGAATTCCCTCT
CTAAATAGACTTTGACTACGTGTGCGGAAACACAGTCAGAGTAGGCGATC
ACAACAAATATCTGTTTACACGTTTCGCCTCCCTTGACCGATATTTTTTC
TTATCCTTCGCGTCCCCACTTTTGTACCGCCTCTCCGCAGATGGAAATGC
GCAAGGACTTCGCGGAGAACTTTCTCGTGAAGTGAGTGTTGGTGTCGCTC
CGAAAAATACTCGGGCATACCTCTGATGCCGAAACGTATTCTATTTCAGG
CCTTCATGGTAGACTTAGAAAAAAAATGATTTAGTTTCTGTTCAAGTTCA
AAATAACACTATTTATGTTGAAAAAACCCCCCAATAATACAAGGATCGCA
AATCAACTTTCGAAATGTGTTGAGAGCTTCGTTTCGCGAAAACTGATGGA
AATATCAAAATACGTGGTGTAAGTCTTTTTTTAGTTTGTTTTGAAATGGT
GTTTCAGCTGTTCATCCCCCGGGACAATTACGAATGCTTTGGAACGTTTT
CACAGAAAAACCGAGAATATTCATCAGAGTTTCGAAATGAGCGAAGATAG
AACGAAGGACCTACCCCTGTGTCCATTCGACTTTACAGTATTGTTAGCAG
TCGTGGGTGATTCGGGGCACATGAAAATGCATGAGTTTACCCCAAGACTC
GGGCGGATTCCTTCAGTTTTTCGCTTCTGTCTGGGGGATGCCGTCGTTCA
CATTAGTTTACCCACTTTTTGTTTCACTACTGGAAATATTCAAATATTCG
ATACAAAGGTGGCTGGGGAACATGGAGAAGAACCTCAAGAAAGCTGGTGG
CGTCTACTTCGTAGGGAACAAGGTACTGTGAAGCTCACGTTGTTTTTCAT
GTTTTTCAAACGACAATGACATACATTGCTGTGGTGGGCGTTGTCAGGGA
GTCAGGGGAAGGAATGGGGGTGCCTTGATTGGGTCTGCTTTGGAGCGATT
TCTTGTTTTTCCCACTTGGAGTACAAAAGTCAACAGAGGAGGCGTTCTAT
TGCAGAACAGATCTGCAGTAAATTGGTTGGTTGTTGGCTCGGTCTAAGTC
TTTATAGTACGTACCCTTCCTAAAACCGTTTCGCTCTGAGCTGACATATC
TTCTGTTCGGTGTTTGTGCACAGCTCTCGATCGGCGACCTGGTTGTCGTG
TGCCGCCTGCTGTGGTTCAAGATGGGTGTCTTGGACGGTATCCCGGCCAC
TTGTGTCGACGACTACCCTCTCTTGTCGGCCTTGGTCGAACTCGTCACGT
CGGAGCCTAAAATAGCCGCCTACAATAACGCCAAGGTCACCATCCAATGA
TTTTTGTTGTATTCGAAGCGTTTTTTGGCAGGGTGTGAGAACGACTTTTC
CTTACTGAGACATACTCATGTAGAATACAGAGTCTCCTCCTAGAGGCTGG
TGTTCACAAGTACTAATAGTGTGTCCTATTATTCGACTGGGTAGCTTGGA
TGTGGTGTTGACGTGCTCTTCTCGTTGCTTGGTTGCTCGGTGGGTGTTGG
CTTCGAAAGATTTTTGTAATTTTGCTTGTAAAATGTTTCGAGTTGAGGCG
CCGTTGTTTGCAATTTTGCTAGATGTTGGTGAAAATTGTCATAGTGCCTC
TTCTCGCGGAGGAAGGGCGAGCGGATATGTTTATTATGTGGAACTTTTTC
ATGGGGTGTTTTTAGCCCGATTATTCGACTTCATTTTTGTCAACACTTGC
AATGGATGAAAAATCGTGGAGTAATGCTACTCTCGTGTGTTTTCATCAAC
TTTCGAAGTAAATTGAGTGATCCGTTTTGCCCACGTTTGGCCTTGTACGA
ATTCAAATGTGAGGTTGCTCTTGC
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Coding sequence (CDS) from alignment at H-paniculata_contig15451:1175..5498-

>mRNA_H-paniculata_contig15451.3190.1 ID=mRNA_H-paniculata_contig15451.3190.1|Name=mRNA_H-paniculata_contig15451.3190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig15451:1175..5498- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCCGAAGTTGACCCTGACCTACTTCGACTTCGCTGGATTGGCCGA
ACCTATTCGAATGGCGTTGGCGGTATCTGGTCTTGAGTGGGAGGACAAGA
GACTGACACGAGAGGAGTTCGGCGCTCTCAAACCCAATGGCTCCGAAGTT
GACCCTGACCTACTTCGACTTCGCTGGATTGGCCGAACCTATTCGAATGG
CGTTGGCGGTATCTGGTCTTGAGTGGGAGGACAAGAGACTGACACGAGAG
GAGTTCGGCGCTCTCAAACCCACTCTTCCGCACGAACAACTGCCCATCCT
GGAAGTGGACGACAAGGTTCTACCTCAGAGTAATGCACAGCTCCGCTACG
TGGGCAAGCTCGCTGCTCTTCCGCACGAACAACTGCCCATCCTGGAAGTG
GACGACAAGGTTCTACCTCAGAGTAATGCACAGCTCCGCTACGTGGGCAA
GCTCGCTGGTCTGTATCCCAGCGATGACCTCGAGGCAGCGTTCGTCGACG
CGACGGTAGATTGTGTGATCGACAACCACATGCACCTCCGGCCTACGCTT
ATGGCGAAGGATGAGGCCTTGAAGGTCTGTATCCCAGCGATGACCTCGAG
GCAGCGTTCGTCGACGCGACGGTAGATTGTGTGATCGACAACCACATGCA
CCTCCGGCCTACGCTTATGGCGAAGGATGAGGCCTTGAAGATGGAAATGC
GCAAGGACTTCGCGGAGAACTTTCTCGTGAAATGGAAATGCGCAAGGACT
TCGCGGAGAACTTTCTCGTGAAGTGGCTGGGGAACATGGAGAAGAACCTC
AAGAAAGCTGGTGGCGTCTACTTCGTAGGGAACAAGGTGGCTGGGGAACA
TGGAGAAGAACCTCAAGAAAGCTGGTGGCGTCTACTTCGTAGGGAACAAG
CTCTCGATCGGCGACCTGGTTGTCGTGTGCCGCCTGCTGTGGTTCAAGAT
GGGTGTCTTGGACGGTATCCCGGCCACTTGTGTCGACGACTACCCTCTCT
TGTCGGCCTTGGTCGAACTCGTCACGTCGGAGCCTAAAATAGCCGCCTAC
AATAACGCCAAGGTCACCATCCAATGACTCTCGATCGGCGACCTGGTTGT
CGTGTGCCGCCTGCTGTGGTTCAAGATGGGTGTCTTGGACGGTATCCCGG
CCACTTGTGTCGACGACTACCCTCTCTTGTCGGCCTTGGTCGAACTCGTC
ACGTCGGAGCCTAAAATAGCCGCCTACAATAACGCCAAGGTCACCATCCA
ATGA
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