mRNA_H-paniculata_contig1545.3189.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI) HSP 1 Score: 679 bits (1751), Expect = 8.700e-196 Identity = 815/2800 (29.11%), Postives = 1132/2800 (40.43%), Query Frame = 1
Query: 382 ARSRRADGFVIVELRNNEALMVKGIRVMLGV----SDDATGRTMVSTGSGGGVRSEGYSAGEHGDPRPRRLLLQYRVFEAGPGTVGTELMMEPQHGHVFFESE--SKGEGGGDT--SFWMSDKDLFRRLIQYLHASDLRVLSAFNSFVSLRDMCRTAARMSPADRAQHNADAAKASXXXXXXXXXXXXXXXXXXXISRRRTSVPGRGFCHGTAVARTS-----------GRL--GRADGAGTSWFSGGLDESEDGKT-----------SHVQVPENSLVSLLVHADQRSNPLRMIHFAEVIPE-PXXXXXXSHHETPSPRILRGDRGARRGGSGSIVPGXXXXXTQGLTRSQXXXXXXXXXXXXXIVGVKTADSGGAKKARSSAGSKSSSPAR----------CITCEVSPVVRLCSPVEKDVRCGYDHGRDEDTGLTFCSGGVGVGGNGNARRAATTQGLETNDEAEEHLKQPNVKLYNMLASELENLNDTCIPWTVTRGHFSP-------TASTPAVRFPGRSPPTGGRNA-YKKKSPFSLIMPPFAVTSIATGPTAAAAALPRLPGASGDLPPELAASGGRWFAKTVGEKALLLTFLPSIDVWRTVATERLHERRKRGAAGRKPGSVSKACETEGAAPAAGAAAPVAAMHEREDPQVNEADAPNRGGGSGSDRSTKVGVVAGAVGAHPSRTTSDARGGRREDSKRERLIRRKTKTDVGEAEEYLVTAEEVVDEEHSLGLFIFLVRSGDFGFPIELPSGMLRDIRRVLLAHIPQRPLGALSAKPRQRIGWGDDPRGGRVGLDARRYQAAVNLTHRQAMFRLIYAALRNGTMLCNGDLSFALSGCGESPRELNITELRQITLDLDLDSSEGSTGGE----GREQESEQAACDVEFTRITSRYLQPLPFSRYYMYWNQEDIAGGQARERGECPAKHAIPFSPLS-----------NMNRVSIKR-AVNCPLVWNGPF---IASNYTPIHRRGVMDRNRSPTTVQQGGFNLLSGQPFRGNVAMASPPAVSALSGSTGLLDPYYPREQPPLFVRFECEH--LPWLPSTDDEAEGTAGLLGTATDGRGTNT------------------------MPRRQPSVKPHLVDSSHSLSSALKAYPATLSSSMGAGVGDG----------DQKKTILRVVATTVPTAISSRGTDAAEEDTASKRGRNWHVANHTRGCFPVQ-GQMSTFCFPLRTC-TGTVVQPNGQNKVGTGMGGSAAGDGGGL-ISAAHGSLTQELEKSMKAVYAAEVLRFLMRRTPVTVPALHQVFMCLKPMPRKEVTRIIVPLELVLLDHVSSNTWAA---PR------RARNMLDWQLLVGKNPSLRRAEAVPVDPSERAAERAEPY----------EDVEAASQLWFMVEETQTAGTGVPA----GEVVGDGVT--------------------------------------------DGYTVPYWTILRVVEGQHSNVNDDKDQGAQGWLFTDNVASHPTSGGPDGSGSKNGRGMTPPXXXXXXXXXXXXXXXXXXTMGLRSSEPSAXXXXXVASVCPATTLVNMKICLYHPPGSAVAADRDVVIERLKQGLLARARRVNQLLLLESLHESHYAYDVLIPQSRSPXXXXXXXXXXLPPSVGG-------HRGPSESSGVRSAFAPVKQHRRRPSGGSGSI---------GLSMAEPVGAAAATPPAGLESVRQTLIRSTSNPATLRANSSKAGFNRSGKGGNRAIADTQH-QPXXXXXXPSSSAMANRVAKGATISSALTLGGEGRSAVASESSDPTTSRSKLAAGFGNPSSTTQRLV----GADRPRMNALSRILDGRRGNARNDDGEGSFALAKIDTAVTGMDDVPRTAGHQGFREGDLECQCVYYRQFPLNHRLLPTEVLTSLGYVNLAQFAIDGRSNLYVYRDKHRHVFYMKLSEAAGSDQNVQDSTR------AIELSVFGIEDVSDEITVGLGRVIERALADLACTKLAMRFEKNDMFQVSAADIEFVRTSEN--------------------------------DYVSRDGDSRNLLEAQTGATSRRDATDAAAAAVLPP---------PKPLPGHGRAWFSIPKQGEGMLDSYLLLGYLREVLCADGPMHVLHCQSAEQXXXXXXXXXXXXXXXMSSPPRLGHRHDERGKGRHLQQRQRTIRSPSNGTSLKPSVDVDVRINAKNLQRRKSTGSSLMARAXXXXXXXXXXHQG---------DASTGTPTEGSNTSSAGHYRGSHTIKR--VYSSDAHVPLGMT-----PPQPPMLPATWAGDKDGSSISAKLSKEISHDDAATYXXXXXXXDAKRTAKTMQSFPSPSPGAPTRPRPYGSGLDDAGSVGRGAFNTLVQQRTPAAGTVAMQAPGSPMTEDGDAEAEVAVVAALEISTSPSSELESIPGVGGDVRDAEDNPEVDRGECESGDDKADTSDRHR-NRDDVGSGQEDQDPA---------------VVDVALDFSELTFYYMARHTGRDLPGNNSDKKRRMYTA-EVGKGIAIVKLYPLDPATDAERSITLRTGFAPPSIATVEAHVSARNHGPDVRLIIGKEELMEAIGPK-----------------------------------------------------KAAATAV---------GKVENRDKETAGDDGAT-------------------------REGEASTSRSIVLELEIFACGAVNVRRLMEIIKGCFEQALTEYMMERLLLRDRAGCTLQVPSSSTA 7689
+RSRRADGFV+VELR+++ALMVKG+R+MLGV +++ GR G+PR R++LQYRVFEAG G +GTEL MEPQHGHV+ E + +K G SFWMSDK+LF+ LI+Y+ A+DLR+LSAF S++ L+ AARMSP RA+ +A A S RR V R G+A + GR+ R+ GG G S V VP SL++L+VHADQR PLRM HFA+ +P PXXXXXX H TPSPR +R + RGG G G R ++G G K A G K + + C P R C+ E D+ D G S VG GG G G E N +++ +L LE+ + +PW +T P +S+ + S GGR+ + P S P A P L GASG LP ELA G RWF++T+G+ A+LLTFLP++D WR + RL +RR + EA + SG + G AG G DE+ SLGLF+FLVRSGDFG PIE S LRDIRR+LLAHIP+ A++ KP +RIGWGDDP GGRVG AR YQ VNL HR+A R++YAALR G MLC+GDL+FALSGCGE+ RE+NIT LR++ LD +EG+ + ++ E ++AACDVEFT I SRYL+P+P + YY+YW ED G A A ++ S++ AV W+G +A+ P +R G N S T+ L G+ + A+A P V PLFVRFE H + D++A A + AT G G PRR S + +VD+SH+LS ALK+ P + G DG ++ L ++ATT P + SR + E Q G C RT TG + +G G +GG ++G G + I + LT+ L + + +Y +EVLR L+RRTPVT+P L V CL+P+P +E+TR +VPLE ++ +S+ +A PR AR +LD +LL GK P RRA+ E + +D+EAA L F+VEE AG A G GDGV+ D Y+VPYW I+RV E + +D + + W G+ R R +A + PA+ ++ ++HP GS V+A++ VI+ +K+GL ARRVNQL+LLESL ++ A +VLIP R P VGG R P ++ A AP+ GGS SI GL M P A A+P A + R + A +++ A + +G GG+ +D + P P + ++ + A S + R E+S ++ G G+P S+ +LV G + R++DGR N+ + + +P+ Q FREG+L+C+C Y R+FPL HRL VL +L L + GRS+LYV D+ + FYM LSE+ D + S + IEL V+GIED+S E+ L IE LA L+ + ND V+AAD EFVRT N ++V+R D + E +S + + AA V P LPGHGRAWFS+P G+LD++LLL YLR VLCADG M +LH + E S PP+ R Q+ + I P P +DV + RR+STGSS +ARA D+ G EG TS+A + + + VP G PP + + GSS A+ + AA DA A M++ + + G GL + GS ++ + ++G+ A+ P E V A V++A ++G G+ K DR++ N + GSG+ ++ V DV +D ++L F Y +R + + KR A +VG+G+A VKL+PLD T A R+ +LRTGF P I+ V + SA G D+ ++ G + L K +AAA AV G+ +R + D A +E A+T R + LE+E+FA G +NV +M +I CFEQAL EYMMERLLLRDR G + +P S+ A
Sbjct: 247 SRSRRADGFVLVELRDDDALMVKGVRIMLGVQTGGANEGGGRXXXXXXXXXXXXXXXXXXXXXGEPRAMRMILQYRVFEAGHGIIGTELRMEPQHGHVWVERQQGTKDSAGXXXXXSFWMSDKELFQNLIRYVDAADLRILSAFKSYIYLQHKSEAAARMSPIARARDHAATAAKSSAAAAHNSGWDIPGASRAGPGGRRGGVCSRQSSSGSAGGASGMETYPRRQSSPGRVPQSRSGSGXXXXXFGGXGSKRGGARDGGAGDDADVLSEVAVPV-SLINLVVHADQRRAPLRMFHFADALPSLPXXXXXXXAHNTPSPRKIR--QRPSRGGPGXXXXGG--------ARDSGEVGQLPTTKEGVVMGRGVG--AGEKGAEEQQGRKDDAGRQRETVENDDGGCXXXXXXPAARHCATCEALPVVQIDNNGDNKDGDGAGSPAVGDGGQGXXXXXRGRAGS-----VHEGDLSANEQMHGLLEKVLEDTQNVSVPWAITSSDLIPPSIYLVANSSSGSSSGIAASRVGGGRSGGHCNAGPAS----PPTXXXXXXXXXVPGLAPPTLKGASGPLPSELAMRG-RWFSRTIGDGAILLTFLPALDEWRKEVSARLEQRRA----------------------------------------LREARKTRKWKKSGRKGPGRGGACAGKGGNE--------------------------------------------DEDDSLGLFLFLVRSGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARRIGWGDDPGGGRVGTLARSYQGLVNLEHRRAFLRVVYAALREGRMLCSGDLAFALSGCGETSREVNITRLRRVVLDNGT--AEGAPRADPADAAQQAEPDKAACDVEFTSILSRYLRPVPGTVYYIYWESEDEGWGAANIPQASSASXXXXXXXXXXXXXXXXXXXXSVTETSLRTTAVAAGHHWSGQVADNVAAALVPTYRGGSPHDNNSSTSTSTCANQSLQGRSSSLS-AVADPETVXXXXXXXXXXTS---SASFPLFVRFEVVHDETVCVDGPDEDAAAMATIAAAATSGDGDENEHDGRVHVGNDAAPGSFHYGAWQQQPRRHRS-RGCVVDASHALSRALKSMPNVARAEQAVGRFDGAGACADCEGLGGAQSHLCILATTFPASDWSRSASSGAEXXXXXXXXXXXXXXXXXXXXXXQTGARFGQCRRPRTLSTGDLAMVHGGGG-GLRIGGGSSGSGTTMPIIPSLARLTEALREHIDKIYCSEVLRSLLRRTPVTMPTLMTVRRCLRPVPAEEITRFLVPLEFMV--DISTEPHSANIGPRGLRSIANARELLDQELLRGKAPCFRRAKEEXXXXXXXXGEGGQEAPTKAVSDSLRQDIEAAKGLLFVVEERVRAGDEGAAPPLHGCQAGDGVSSPPPPPRIDASADGRRNGATRTDVGVDDNAHNGGDSSRHPAEANDDYSVPYWGIVRVGE-----LTNDPGEEPEPWPLY---------------GASRAR--------------------------TRQLGKTAHAFSKPSEPMPAS-----QVSVHHPRGSTVSANKGTVIDGIKRGLHLAARRVNQLMLLESLIQTRVACEVLIPPPRPPATTTTAPDMPEVLRVGGVTYSNPRARRPKANALTGGAGAPLGGV----GGGSRSIDDKGVGERGGLLMQSPPPAGTASPVASAAKDAGVVAR---DGAVGTSSAFVAPESAAGTGGS---SDRKKLSPRVDGIGPGGEGLLSKASTWAGCSLTVDTRSVVRGVFRRENSLDAANK-----GSGSPCSSPTQLVLDGGGGE------SGRVVDGRATNSTHXXXXXXXXXXXXXGGLV----LPQRELGQAFREGELQCECKYSRRFPLYHRLQAQMVLVTLATTALDGLRVHGRSDLYVCPDQLGN-FYMTLSESPRRDAASRGSRQEASSQPVIELKVYGIEDLSTELKRRLNDKIEFKLAKQGWEALSSQLGMNDHLNVTAADWEFVRTGPNADLARDSGGVSRGGVTGRVQQATSRGSGSGGEEFVARAADEQTRQEKSHSDSSSKGSFTAATTKVHKEDRGGKEGAAPASLPGHGRAWFSLP--AGGVLDTFLLLQYLRSVLCADGLMKILHSATNE-----------------SQPPQSPQLEKPR-------QQSQLIPPP-------PRLDVSYKGRG---HRRRSTGSSPLARAYSQGAPGSASGSASVGGGRAGVDSWDGAAAEGRETSAAAEAVVTAAVHEGITLAGGVAVPSGGNDSGHGPPGGDAVGGLYDRAGSGSSTDARRASAGVGAMAAA-ATTAAGADAGGPAARMRTVDDLDSSGKSERKARG-GLSEGGSK--------LEYSSSSSGSSAVAKPHD----------EARAVTAXXXXXXXXXXXXXXXXXA-KVKEAGRPSPGEQGSVTLGEIKG--KDRNKANLERSGSGEGSREDGAGGSMAGATRPDEGLVEDVEVDPNDLNFVYSSRQATTGVRRGDPAAKRTAEAARKVGEGLAFVKLWPLDAKTGA-RTPSLRTGFRPSPISEVASRTSATGGGMDIEILAGADGLAAVAKAKAXXXXXXXXXXAPLERSSPVPASVRASSPPSSLSSPPGSPAEIVDTAPDGAGLEAAAAAVSGRDVGSGAGESSSRQASSVVADNAADNIGIEAMPEAAATGEAGRAAAGEKKEATAATPRWLALEVEVFAVGGINVPYMMFLITVCFEQALAEYMMERLLLRDRTGPSRGLPQSAVA 2792
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.430e-18 Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 340 EIWNAAVHRMVNALARSRRADGFVIVELRNNEALMVKGIRVMLGVSDDATGRTMVSTGSGGGVRSEGYSAGEHGDPRPRRLLLQYRVFEAGPGTVGTELMMEPQHGHVFFESESKGEGGGDTSFWMSDKDLFRRLIQYLHASDLRVLSAFNSFVSLRDMC 819
++ A R+V ALA +R+ DGFV +EL + ALM+KG+ G++ A GG ++ R+L+QYR F A G GTEL MEPQ+G V ++ + G G W++D+D F L +Y+HA+DL VLSAFN+F +++ +C
Sbjct: 1117 DVTGAESARVVRALAHARQLDGFVDMELTDRNALMIKGV----GIAHAA-----------GGAPAQ-------------RVLVQYRAFSAPGGVFGTELFMEPQYGFVVADAAAGGAGDSAEPRWINDRDFFELLWRYVHAADLCVLSAFNTFGAVKALC 1248
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Match: A0A1V9ZNS4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNS4_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 8.200e-13 Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 5473 FREGDLECQCVYYRQFPLNHRLLPTEVLTSLGYVNLAQFAIDGRSNLYVYRDKHRHVFYMKLSEAAGSDQNVQDSTRAIELSVFGIEDVSDEITVGLGRVIERALADLACTKLAMRFEKNDMFQVSAADIEFV 5871
F G EC+C + + F L+ RL L + L QF + R N++VY+DK HVFYM+LS A + IEL VFGI + ++E+TV L RV+ER + + + +N FQ+ D+ F+
Sbjct: 1490 FWPGQFECECKFKKLFKLHERLAAQVTLNGICNAALEQFQVHNRLNMFVYKDKRGHVFYMQLSVAPNNQ---------IELQVFGICEPAEEVTVELCRVLERKIDEAIQLIIMKALARNSKFQLGHGDVVFI 1613
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Match: A0A7S2RKF7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKF7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.630e-7 Identity = 39/139 (28.06%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 5479 EGDLECQCVYYRQFPLNHRLLPTEVLTSLGYVNLAQFAIDGRSNLYVYRDKHRHVFYMKLSEAAGSDQNVQDS--TRAIELSVFGIEDVSDEITVGLGRVIERALADLACTKLAMRFEKNDMFQVSAADIEFVRTSEND 5889
+G C C + ++ +N RL + + L L F + R N +VY D+ RHVFY+KL D + S + I L V GI+ ++E+ L ++ +A LA +N F++ D+EF++ + D
Sbjct: 1711 DGKFSCPCYHRVRYEINERLHVSSAMHELRVNALHSFIVTNRRNTFVYMDRERHVFYLKLRTTT-EDPTAEHSGEQKYIMLEVHGIDPPTEEMKQMLHALLSNVIAGGTMQALARLLHRNPQFKIQPYDLEFIQRASPD 1848
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Match: A0A2D4BZ09_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ09_PYTIN) HSP 1 Score: 60.5 bits (145), Expect = 6.470e-5 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 1
Query: 5578 LAQFAIDGRSNLYVYRDKHRHVFYMKLSEAA------------GSDQNVQDSTRA---IELSVFGIEDVSDEITVGLGRVIERALADLACTKLAMRFEKNDMFQVSAADIEFV 5871
L QF + R ++VYRD+ HVFYMK+S A G NV S+ + L VFG+ + +E+T L R++ER L + L +N FQ+S++DI F+
Sbjct: 7 LEQFQVHNRRQVFVYRDRGGHVFYMKMSLAPATVANSGCHQILGQASNVLMSSNGSVGVLLEVFGVCEPGEEVTHELCRLLERKLDEAMQLVLMKLLARNAKFQLSSSDIAFI 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1545.3189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1545.3189.1 >prot_H-paniculata_contig1545.3189.1 ID=prot_H-paniculata_contig1545.3189.1|Name=mRNA_H-paniculata_contig1545.3189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2618bp QQEQQEQQPQHQQVHQQIQYNRSRVWYPMFSGDDPEGRPAGLGDRFSDVSback to top mRNA from alignment at H-paniculata_contig1545:74..18822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1545.3189.1 ID=mRNA_H-paniculata_contig1545.3189.1|Name=mRNA_H-paniculata_contig1545.3189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18749bp|location=Sequence derived from alignment at H-paniculata_contig1545:74..18822+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1545:74..18822+ >mRNA_H-paniculata_contig1545.3189.1 ID=mRNA_H-paniculata_contig1545.3189.1|Name=mRNA_H-paniculata_contig1545.3189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=15708bp|location=Sequence derived from alignment at H-paniculata_contig1545:74..18822+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |