prot_H-paniculata_contig15441.3187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig15441.3187.1
Unique Name	prot_H-paniculata_contig15441.3187.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	95

Homology

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: D8LLE7_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE7_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 6.980e-55
Identity = 86/95 (90.53%), Postives = 90/95 (94.74%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVIIGE 95
            SPYQDLEKATVLQECRVFSDSNVVTNNP+RC  LITKLL+IL  GET SSSETTEVFFGVTKLFQSQD+NLRRMMY+FIKEVAETCDPDDVIIGE
Sbjct:   51 SPYQDLEKATVLQECRVFSDSNVVTNNPRRCGMLITKLLYILNTGETLSSSETTEVFFGVTKLFQSQDHNLRRMMYLFIKEVAETCDPDDVIIGE 145

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.460e-44
Identity = 77/93 (82.80%), Postives = 86/93 (92.47%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SPY  LEKATVLQECR F+DSNVVTNNPKRCCQLITKLL +LTQGETF+SSE T+VFFGVTKLFQS+D+NLRRMMY+FIKEVAE  +P+DVII
Sbjct:   48 SPYHALEKATVLQECRAFNDSNVVTNNPKRCCQLITKLLHLLTQGETFTSSEVTDVFFGVTKLFQSKDHNLRRMMYLFIKEVAEATNPNDVII 140

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.150e-41
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+ DLEKA VLQECR FSDSNVVT++P+RC  LITKLL IL+ G+TFSSSETTEVFFGVTKLFQS D NLRRMMY+FIKEVA+ C+PDDVII
Sbjct:   38 SPFADLEKAAVLQECRAFSDSNVVTHHPQRCSHLITKLLHILSTGDTFSSSETTEVFFGVTKLFQSHDANLRRMMYLFIKEVADNCNPDDVII 130

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A4D9D1Q3_9STRA (Adaptin_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Q3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.380e-40
Identity = 71/93 (76.34%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SPYQDLEKA+VLQECRVF D+N+VT +P+ CCQLITKLL IL+QGE  +S ETT VFFGVTKLFQS + NLRRMMY+FIKE+AE C+PDDVII
Sbjct:   54 SPYQDLEKASVLQECRVFHDANIVTQDPRLCCQLITKLLHILSQGEQLTSVETTTVFFGVTKLFQSHNSNLRRMMYLFIKEMAEACNPDDVII 146

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A6S8VPR0_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8VPR0_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.650e-40
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+ DLEKATVLQECRVFSDS VVT +P++C QLITKLL I+TQG+  SSSE TEVFFGVTKLFQS D +LRRM+Y FIKEVAETC+PDD+II
Sbjct:   65 SPFSDLEKATVLQECRVFSDSKVVTESPRKCSQLITKLLHIVTQGDAMSSSEVTEVFFGVTKLFQSSDASLRRMIYFFIKEVAETCNPDDIII 157

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: F0Y6T5_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6T5_AURAN)

HSP 1 Score: 150 bits (379), Expect = 3.350e-40
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+ DLEKATVLQECRVFSDS VVT++P++C QLITKLL I+TQG+  SSSE TEVFFGVTKLFQS D +LRRM+Y FIKEVAETC+PDDVII
Sbjct:   39 SPFADLEKATVLQECRVFSDSKVVTDSPRKCSQLITKLLHIVTQGDAMSSSEVTEVFFGVTKLFQSSDASLRRMVYFFIKEVAETCNPDDVII 131

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A7S3ZYC8_9STRA (Hypothetical protein (Fragment) n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYC8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.520e-40
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+ DLEKATVLQECRVFSDS VVT +P++C QLITKLL I+TQG+  SSSE TEVFFGVTKLFQS D +LRRM+Y FIKEVAETC+PDD+II
Sbjct:   65 SPFSDLEKATVLQECRVFSDSKVVTESPRKCSQLITKLLHIVTQGDAMSSSEVTEVFFGVTKLFQSSDASLRRMIYFFIKEVAETCNPDDIII 157

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: I2CP15_NANGC (Adaptin_N domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CP15_NANGC)

HSP 1 Score: 149 bits (376), Expect = 4.500e-40
Identity = 71/93 (76.34%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SPYQDLEKA+VLQECRVF D+N+VT +P+ CCQLITKLL IL+QGE  +S ETT VFFGVTKLFQS + NLRRMMY+FIKE+AE C+PDDVII
Sbjct:   54 SPYQDLEKASVLQECRVFHDANIVTQDPRLCCQLITKLLHILSQGEQLTSVETTTVFFGVTKLFQSHNSNLRRMMYLFIKEMAEACNPDDVII 146

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.160e-39
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+QDLEKATVLQECR F+ + VVT NP+RC  LITKLL I+TQGE+ +S+E TEVFFGVTKLFQSQD  LRRMMY+FIKEVAETC+PDDVII
Sbjct:   37 SPFQDLEKATVLQECRCFNQAEVVTQNPRRCATLITKLLHIVTQGESLTSTEVTEVFFGVTKLFQSQDPYLRRMMYLFIKEVAETCNPDDVII 129

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BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Match: F0YM71_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YM71_AURAN)

HSP 1 Score: 148 bits (374), Expect = 1.560e-39
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSSSETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVII 93
            SP+ DLEKATVLQECRVFSD+ VVT +P++C QLITKLL I+TQG+  SSSE TEVFFGVTKLFQS D +LRRM+Y FIKEVAETC+PDDVII
Sbjct:   36 SPFADLEKATVLQECRVFSDAKVVTESPRKCSQLITKLLHIVTQGDAMSSSEVTEVFFGVTKLFQSTDASLRRMVYFFIKEVAETCNPDDVII 128

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15441.3187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LLE7_ECTSI	6.980e-55	90.53	Coatomer protein complex, gamma sub-unit n=1 Tax=E...	[more]
A0A836CC02_9STRA	7.460e-44	82.80	Coatomer subunit gamma n=1 Tax=Tribonema minus Tax...	[more]
A0A6U1MSQ3_9STRA	5.150e-41	79.57	Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica...	[more]
A0A4D9D1Q3_9STRA	2.380e-40	76.34	Adaptin_N domain-containing protein n=1 Tax=Nannoc...	[more]
A0A6S8VPR0_9STRA	2.650e-40	77.42	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]
F0Y6T5_AURAN	3.350e-40	78.49	Coatomer subunit gamma n=1 Tax=Aureococcus anophag...	[more]
A0A7S3ZYC8_9STRA	3.520e-40	77.42	Hypothetical protein (Fragment) n=4 Tax=Pelagomona...	[more]
I2CP15_NANGC	4.500e-40	76.34	Adaptin_N domain-containing protein n=2 Tax=Nannoc...	[more]
A0A7S2S5Q9_9STRA	1.160e-39	77.42	Coatomer subunit gamma n=1 Tax=Rhizochromulina mar...	[more]
F0YM71_AURAN	1.560e-39	77.42	Coatomer subunit gamma n=1 Tax=Aureococcus anophag...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 8..85 e-value: 1.0E-13 score: 50.7
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..94 e-value: 3.7E-27 score: 97.2
IPR017106	Coatomer gamma subunit	PANTHER	PTHR10261	COATOMER SUBUNIT GAMMA	coord: 1..93
None	No IPR available	PANTHER	PTHR10261:SF0	COATOMER SUBUNIT GAMMA-2	coord: 1..93
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 11..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15441	contig	H-paniculata_contig15441:4658..6160 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15441.3187.1	mRNA_H-paniculata_contig15441.3187.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig15441 4658..6160 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig15441.3187.1 ID=prot_H-paniculata_contig15441.3187.1|Name=mRNA_H-paniculata_contig15441.3187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
SPYQDLEKATVLQECRVFSDSNVVTNNPKRCCQLITKLLFILTQGETFSS
SETTEVFFGVTKLFQSQDYNLRRMMYIFIKEVAETCDPDDVIIGE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR017106	Coatomer_gsu
IPR016024	ARM-type_fold