prot_H-paniculata_contig154.3165.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig154.3165.1
Unique Nameprot_H-paniculata_contig154.3165.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig154.3165.1 vs. uniprot
Match: D8LBW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW1_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 8.050e-13
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   40 DLVESSKATEAYPTAPVIVWSEYMDLAPGDVVVTVEHCHECHRHRSTTRHEEEGYVRHANAVK 102
            + V   K        P + W E+ ++  GDVVVTVEHCH CHRHR TTRH+ E Y+ HANAVK
Sbjct:  102 ETVREEKGDGLASAVPTVSWPEHAEMEKGDVVVTVEHCHGCHRHRMTTRHDPEVYLSHANAVK 164          
BLAST of mRNA_H-paniculata_contig154.3165.1 vs. uniprot
Match: A0A6H5KVB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.160e-8
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   55 PVIVWSEYMDLAPGDVVVTVEHCHECHRHRSTTRHE 90
            P++ W E+ ++  GDVVVTVEHCH CHRHR TTRH+
Sbjct:   10 PMVSWPEHAEMEKGDVVVTVEHCHGCHRHRMTTRHD 45          
BLAST of mRNA_H-paniculata_contig154.3165.1 vs. uniprot
Match: A0A7S3GU28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU28_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.700e-5
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   59 WSEYMDLAPGDVVVTVEHCHECHRHRSTTRHEEEGYVRHANAVK 102
            W EY  +  GDVV+TVEHC +CH H   T H+EE YV+ A  V+
Sbjct:  308 WPEYKVMEAGDVVLTVEHCCQCHEHDMCTHHKEEQYVQMAETVR 351          
BLAST of mRNA_H-paniculata_contig154.3165.1 vs. uniprot
Match: D7FVI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI6_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.200e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0
Query:   55 PVIVWSEYMDLAPGDVVVTVEHCHECHRHRSTTRHEEEGYVRHANAVK 102
            P + WSE   +  GDV+VTVEHC  C RHR +  H  + Y+R A A+K
Sbjct:   87 PPLRWSEEKHMVAGDVLVTVEHCAACSRHRMSLHHNADAYIRRAAAMK 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig154.3165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBW1_ECTSI8.050e-1352.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVB5_9PHAE6.160e-863.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3GU28_9STRA1.700e-552.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D7FVI6_ECTSI3.200e-547.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig154contigH-paniculata_contig154:28124..30053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig154.3165.1mRNA_H-paniculata_contig154.3165.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig154 28123..30053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig154.3165.1 ID=prot_H-paniculata_contig154.3165.1|Name=mRNA_H-paniculata_contig154.3165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
DFLHERKEIEQDAPKQQSKQLNAGTWAASRKCSELTSVPDLVESSKATEA
YPTAPVIVWSEYMDLAPGDVVVTVEHCHECHRHRSTTRHEEEGYVRHANA
VK
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