prot_H-paniculata_contig15051.3000.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15051.3000.1
Unique Nameprot_H-paniculata_contig15051.3000.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.140e-34
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            TP+VGWVLRLISARELSDKMCRK P+SLNVISHDAAAE+IRAVQ RGV VT+V+VDTVGDP FYQSKLEK
Sbjct:  107 TPEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEK 176          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK)

HSP 1 Score: 85.5 bits (210), Expect = 2.550e-18
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            TP VGWV+R ISA E+S++M RK P SLN+IS+ AA +MI+     GV +TKV+VDTVGDP  YQ +L +
Sbjct:   92 TPSVGWVIRSISAEEISNQMLRKVPVSLNIISYAAAMQMIQTALDDGVNITKVYVDTVGDPAAYQERLTR 161          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A5D6XNI5_9STRA (Ribonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNI5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.940e-17
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T Q+GWV+RLISA+E+SDKM R+T  +LN +S +AA +MIRA Q +GV VT V+VDTVGDP +YQ+ L K
Sbjct:   92 TDQLGWVVRLISAQEISDKMQRQTS-NLNEMSRNAAIQMIRATQAKGVNVTHVYVDTVGDPKWYQTFLTK 160          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A3M6V9E7_9STRA (Ribonuclease n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9E7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.390e-17
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN IS DAA ++I  VQ +G +V KVFVDTVGDP +YQS L K
Sbjct:   83 TESLGWIVRLISAAEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQSFLTK 151          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A0P1A837_PLAHL (Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A837_PLAHL)

HSP 1 Score: 82.0 bits (201), Expect = 1.370e-16
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN IS +AA ++IR VQ +GV+V KVFVDTVGDP +YQS L K
Sbjct:   84 TTGLGWIVRLISAAEISDKMQRQTS-NLNEISRNAAIQLIREVQKKGVVVKKVFVDTVGDPRWYQSFLTK 152          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A484DZ38_BRELC (Ribonuclease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ38_BRELC)

HSP 1 Score: 80.1 bits (196), Expect = 2.520e-16
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN +S DAA ++I  +Q +GV+V KVFVDTVGDP +YQ+ L K
Sbjct:   84 TEDLGWIVRLISAAEISDKMQRQTR-NLNEMSRDAAIQLINEIQKKGVLVKKVFVDTVGDPRWYQNFLTK 152          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A6A3Y691_9STRA (Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y691_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.550e-16
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN IS DAA ++I  VQ +G +V KVFVDTVGDP +YQS L K
Sbjct:   83 TEGLGWIVRLISAVEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGTVVKKVFVDTVGDPRWYQSFLTK 151          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A835YL34_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL34_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.710e-16
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    3 QVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            ++GWVLR++ ARELS +M R+ P SLN ISH AAAEMIR    R V +T V+VDTVGDP  Y   L +
Sbjct:   58 RIGWVLRVLGARELSARMLRRAPHSLNAISHAAAAEMIRHALGRAVALTHVYVDTVGDPDNYARALRR 125          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A081AN68_PHYPR (Ribonuclease n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081AN68_PHYPR)

HSP 1 Score: 78.2 bits (191), Expect = 4.400e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN +S DAA ++I  VQ +G +V KVFVDTVGDP +YQ+ L K
Sbjct:   85 TEGLGWIVRLISAAEISDKMQRQTS-NLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLTK 153          
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Match: A0A8J5M4W1_9STRA (Ribonuclease n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4W1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.760e-16
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMVTKVFVDTVGDPGFYQSKLEK 70
            T  +GW++RLISA E+SDKM R+T  +LN IS DAA ++I  VQ +G +V KVFVDTVGDP +YQS L K
Sbjct:   84 TEGLGWIVRLISAAEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQSFLTK 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15051.3000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP9_ECTSI3.140e-3487.14Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A6V1NB11_HETAK2.550e-1857.14Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
A0A5D6XNI5_9STRA1.940e-1761.43Ribonuclease n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A3M6V9E7_9STRA3.390e-1760.00Ribonuclease n=1 Tax=Peronospora effusa TaxID=5428... [more]
A0A0P1A837_PLAHL1.370e-1661.43Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A484DZ38_BRELC2.520e-1657.14Ribonuclease n=1 Tax=Bremia lactucae TaxID=4779 Re... [more]
A0A6A3Y691_9STRA3.550e-1660.00Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A835YL34_9STRA3.710e-1657.35Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A081AN68_PHYPR4.400e-1657.14Ribonuclease n=1 Tax=Phytophthora parasitica P1976... [more]
A0A8J5M4W1_9STRA4.760e-1660.00Ribonuclease n=1 Tax=Phytophthora aleatoria TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 11..69
e-value: 2.8E-6
score: 27.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..70
e-value: 4.1E-15
score: 58.0
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 4..70
NoneNo IPR availablePANTHERPTHR10954:SF7RIBONUCLEASE H2 SUBUNIT Acoord: 4..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15051contigH-paniculata_contig15051:889..1101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15051.3000.1mRNA_H-paniculata_contig15051.3000.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15051 889..1101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15051.3000.1 ID=prot_H-paniculata_contig15051.3000.1|Name=mRNA_H-paniculata_contig15051.3000.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
TPQVGWVLRLISARELSDKMCRKTPFSLNVISHDAAAEMIRAVQTRGVMV
TKVFVDTVGDPGFYQSKLEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024567RNase_HII/HIII_dom
IPR036397RNaseH_sf
IPR001352RNase_HII/HIII