mRNA_H-paniculata_contig149.2918.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig149.2918.1
Unique NamemRNA_H-paniculata_contig149.2918.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI001EAFC2AD (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFC2AD)

HSP 1 Score: 67.0 bits (162), Expect = 8.890e-10
Identity = 60/194 (30.93%), Postives = 82/194 (42.27%), Query Frame = 1
Query:   13 TPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMVKLV 594
            TP+ +AA+ GH E++   L  GA V   DK   T                          S      +P+M+A  + H EVVE LL  GA      +  DT LHLACK    E  V  +L  G L  +    K  TP+  AA+ G  E    L+       +++ DK      G +T L  A R G+V++VK V
Sbjct:   69 TPVMLAADKGHKEVVELLLSKGADVSLLDKGHDTLLHLACKGGNVEVVKFVLSLGMLSINSRGWKKMTPVMLAADKGHKEVVELLLSKGADVSLLDKGHDTLLHLACKGGNVE-VVKFVLSLGMLSINSRGWKKMTPVMLAANKGHKEVVELLVS--KGADVSLLDK------GHDTLLHFACRGGNVEVVKFV 253          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: A0A5E3WKZ5_9AGAM (NACHT domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3WKZ5_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 1.700e-8
Identity = 65/205 (31.71%), Postives = 85/205 (41.46%), Query Frame = 1
Query:   10 RTPLHVAAEGGHCEILAAFLEHGA---VVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLACKVDTPEGTVASLLGHGAL--PG-----HCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLI--AVRRGHVDMVK 588
            RTPLH +A  GH +I A  LE GA   ++D  D T +                           +    G++PL +A ++ H E+V  LL  GA       + DTALHLA   D    TV  LLG   L  P         N   +TPLH AAS G  E  R L+Q         R  +  + D G   + +  A   GHVD V+
Sbjct: 1094 RTPLHDSALRGHIKIPALLLERGARLTLLDGNDNTALYLAADNGLTDTVDTLLSHAPDAIDACRTHNAAGYTPLHIASLKGHTEIVRLLLKRGAFIDAETAERDTALHLAA-CDGRIDTVQVLLGLRDLNVPNVVELCRARNATGRTPLHEAASRGYPEIIRLLLQ---------RGALSTAADYGPGGIALHWAAFNGHVDTVR 1288          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI001EAFF8CA (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFF8CA)

HSP 1 Score: 63.5 bits (153), Expect = 1.700e-8
Identity = 57/194 (29.38%), Postives = 82/194 (42.27%), Query Frame = 1
Query:   13 TPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMVKLV 594
            TP+ +AA+ GH E++   +  GA V   DK   T                          S      +P+M+A  + H EVVE L+  GA      +  DT LHLACK    E  V  +L  G L  +    K  TP+  AA+ G  E    L+       +++ DK      G +T L  A R G+V++VK +
Sbjct:   80 TPVMLAADKGHKEVVELLVSKGADVSLLDKGHGTLLHFACRGGNVELVKFVLSLGMLSINSRGWKKMTPVMLAADKGHKEVVELLVSKGADVSLLDKGHDTLLHLACKGGNVE-VVKFVLSLGMLSINSRGWKKMTPVMLAANKGHKEVVELLVS--KGADVSLLDK------GHDTLLHFACRGGNVEVVKFL 264          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: A0A6H5L536_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L536_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.520e-7
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 1
Query:  394 HCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAV 561
            HCWNE L+ PL  A   G++ A   L+  LSPRQINMRD+V    DGG TPL+ AV
Sbjct:  383 HCWNEYLRPPLTVACMSGRLGAVELLLPRLSPRQINMRDRVSGVDDGGVTPLVAAV 438          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: D7G254_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G254_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 4.360e-7
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 1
Query:  394 HCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAV 561
            HCWN  L+ PL  A   G++ A   L+  LSPRQINMRD+V  + DGG TPL+ AV
Sbjct:  493 HCWNGHLRPPLTVACMSGRLGAVELLLPRLSPRQINMRDRVSGADDGGVTPLVAAV 548          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI00201F97B8 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F97B8)

HSP 1 Score: 59.3 bits (142), Expect = 7.870e-7
Identity = 55/195 (28.21%), Postives = 82/195 (42.05%), Query Frame = 1
Query:    4 EGRTPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMVK 588
            +GRTPL +AA GGH E+    + +GA          T                          S+  +G +PL++A    H EV + L+  GA+      KG+T LH+AC     E  V  ++  G    +  N+  +TPL  AA  G  E    L++  +   +     V N    G T L +A   GHV+MV+
Sbjct:  439 DGRTPLLLAAFGGHREVFDLLVRNGANASVVCNMGNTILHVACIGGHVEMVEHIMSQGIGDVNSQNQDGRTPLLLAAFGGHREVFDLLVRNGANASVVCNKGNTILHVACIGGHVE-MVEHIMSQGIGDVNSQNQDGRTPLLLAAFGGHREVFDLLVRNGANASV-----VCNK---GNTILHVACIGGHVEMVE 624          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI001EE5FFCC (uncharacterized protein LOC124289201 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5FFCC)

HSP 1 Score: 58.5 bits (140), Expect = 1.650e-6
Identity = 47/159 (29.56%), Postives = 68/159 (42.77%), Query Frame = 1
Query:  205 NGHSPLMVAIMREHHEVVEALLDAGASPG---TSGEKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLI-----------------------------QWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMV 585
            +G +PLM A    H  +V+ LL  GA P    +S ++ D +LHLACK       V   L    +      E+ +TPL +A   G++E A++L+                             +WL      +     N  D G TPL+ A+R GHVDMV
Sbjct: 2157 HGRTPLMYASYNGHEHIVKLLLGKGALPTHDVSSIDQKDNSLHLACKKGEIR-IVQIFLDQAKVDIESRGERARTPLMYACRHGQLETAKELVARHAKANVLDETGFSCLHLAAMKGHVPTAEWLISSDQGIVVDCTN--DTGRTPLMYAIRNGHVDMV 2312          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI001EE54E05 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE54E05)

HSP 1 Score: 57.8 bits (138), Expect = 2.530e-6
Identity = 57/226 (25.22%), Postives = 94/226 (41.59%), Query Frame = 1
Query:    7 GRTPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLIQ------WLSPRQINM------------------RDKV-VNSM-DGGETPLLIAVRRGHVDMVKLVRGRR 606
            GRTP+ +AAE GH E++   +  GA +   DK                              S +    +PLMVA +  H  VV  L+  GA+     ++G+  LHLAC+    E  V  ++    +  +C   +  TP+  A   G  +    L+         + R+ N+                  R+ V +NS  +  +TP+++A RRGH D+V+L+  +R
Sbjct:   63 GRTPVMLAAENGHFEVMELLVGKGANLSLVDKRGNNILHCACRRGDVEVVKYIVSKKMVDINSRERKNKTPLMVAGVWGHEAVVGLLVKQGANQALRDKRGNNILHLACQGGHVE-VVKYIISLETVDVNCRGWRKTTPVMCAGQNGHKDVVELLVNNGANLLLRNSRKNNILHTACHGGHIEVLKYVLSRNTVDINSRGNDNKTPVMVAGRRGHRDVVELLVDQR 287          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE)

HSP 1 Score: 56.6 bits (135), Expect = 7.570e-6
Identity = 51/197 (25.89%), Postives = 80/197 (40.61%), Query Frame = 1
Query:    7 GRTPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGD-TALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGKVEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMVKLV 594
            G +PL  A +  H +I    + HGA V+ R   D                            ++ +NG+SPLM A+ + H E VE L++ GA     G K + TALH+A      E  ++++L       +  +    +PL +A      E A  LI       +N+R    N      T L +A   G+V M  ++
Sbjct: 3728 GYSPLIFAVDNNHTKITEYLINHGADVNLRGSKDNRTALHVAGLTGNVEMANVLVSNGADINAQDINGYSPLMFAVYKNHTETVEFLINQGADVNLRGSKDNRTALHVAAATGNIE--MSNVLVSNGADINAQDINGYSPLMFAVDNNHPETAEFLIN--QGVDVNLRGSKDN-----RTALHVAAATGNVKMANVL 3915          
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Match: UPI0015CF8877 (fibronectin type 3 and ankyrin repeat domains protein 1 isoform X1 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015CF8877)

HSP 1 Score: 55.5 bits (132), Expect = 1.220e-5
Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 1
Query:    7 GRTPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDV-TXXXXXXXXXXXXXXXXXXXXXXXXXLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSGEKGDTALHLA 330
            G TPLH AA+GGH  ++A  +  G+ +D RD     T                 XXXXXXXX     +G +PLM A++  H E+VE LLD GA      E G  A+ +A
Sbjct:  222 GCTPLHWAADGGHLPVIAHMIHDGSELDVRDSVSHWTPLMRVSAMSGNAAVASLXXXXXXXXXXXDKDGKTPLMAAVLNNHEELVELLLDNGADHHVKNEFGSGAIEMA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig149.2918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
UPI001EAFC2AD8.890e-1030.93ankyrin repeat domain-containing protein 17-like n... [more]
A0A5E3WKZ5_9AGAM1.700e-831.71NACHT domain-containing protein n=1 Tax=Peniophora... [more]
UPI001EAFF8CA1.700e-829.38ankyrin repeat domain-containing protein 17-like n... [more]
A0A6H5L536_9PHAE1.520e-755.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G254_ECTSI4.360e-753.57Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
UPI00201F97B87.870e-728.21ankyrin repeat domain-containing protein 50-like n... [more]
UPI001EE5FFCC1.650e-629.56uncharacterized protein LOC124289201 n=1 Tax=Halio... [more]
UPI001EE54E052.530e-625.22serine/threonine-protein phosphatase 6 regulatory ... [more]
A0A8J9UWK9_BRAAE7.570e-625.89Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
UPI0015CF88771.220e-538.53fibronectin type 3 and ankyrin repeat domains prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig149contigH-paniculata_contig149:47760..48371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score63.9
Seed ortholog evalue9.8e-08
Seed eggNOG ortholog10036.XP_005071792.1
Preferred nameANKRD16
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ankyrin repeat domain-containing protein 16
EggNOG OGs35JDJ@314146,38FSA@33154,3BB34@33208,3D3K3@33213,3JBXI@40674,4892K@7711,497RS@7742,4PTFB@9989,COG0666@1,KOG0504@2759
COG Functional cat.S
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
Exons1
Model size612
Cds size612
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929192.6884472-CDS-H-paniculata_contig149:47759..483711622929192.6884472-CDS-H-paniculata_contig149:47759..48371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig149 47760..48371 -
1691480764.6229517-CDS-H-paniculata_contig149:47759..483711691480764.6229517-CDS-H-paniculata_contig149:47759..48371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig149 47760..48371 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig149.2918.1prot_H-paniculata_contig149.2918.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig149 47760..48371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig149.2918.1

>prot_H-paniculata_contig149.2918.1 ID=prot_H-paniculata_contig149.2918.1|Name=mRNA_H-paniculata_contig149.2918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
SEGRTPLHVAAEGGHCEILAAFLEHGAVVDSRDKTDVTPLYLAAAEGHLN
AVRLLVAAGAKLDLSEKVNGHSPLMVAIMREHHEVVEALLDAGASPGTSG
EKGDTALHLACKVDTPEGTVASLLGHGALPGHCWNEKLQTPLHWAASWGK
VEAARQLIQWLSPRQINMRDKVVNSMDGGETPLLIAVRRGHVDMVKLVRG
RRGP
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mRNA from alignment at H-paniculata_contig149:47760..48371-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig149.2918.1 ID=mRNA_H-paniculata_contig149.2918.1|Name=mRNA_H-paniculata_contig149.2918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=612bp|location=Sequence derived from alignment at H-paniculata_contig149:47760..48371- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGGAGGGACGCACCCCGCTCCACGTCGCCGCGGAGGGTGGCCACTGTGA AATTTTGGCGGCGTTTCTGGAGCACGGGGCAGTGGTGGACTCGCGGGACA AGACGGACGTGACGCCGCTGTACCTGGCAGCGGCTGAGGGGCACTTGAAC GCCGTGAGATTGCTGGTGGCCGCCGGTGCCAAGTTAGATTTGTCGGAAAA GGTCAACGGACACAGTCCATTGATGGTCGCCATAATGAGGGAGCACCACG AGGTCGTGGAGGCGTTACTCGATGCCGGGGCCTCGCCCGGGACCAGCGGG GAGAAGGGGGATACCGCCTTGCACCTGGCGTGCAAAGTAGACACCCCCGA GGGGACCGTGGCCTCTCTGCTCGGGCACGGAGCGCTGCCCGGGCACTGCT GGAACGAGAAGCTACAGACGCCGCTGCACTGGGCTGCGTCCTGGGGAAAA GTAGAGGCCGCGAGGCAGCTGATCCAGTGGCTGTCGCCGAGGCAGATAAA CATGCGCGACAAGGTGGTGAACAGCATGGATGGTGGAGAAACTCCGCTCC TTATCGCCGTACGGCGCGGTCACGTCGATATGGTGAAGCTGGTGAGAGGC AGGAGAGGTCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig149:47760..48371-

>mRNA_H-paniculata_contig149.2918.1 ID=mRNA_H-paniculata_contig149.2918.1|Name=mRNA_H-paniculata_contig149.2918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig149:47760..48371- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGGAGGGACGCACCCCGCTCCACGTCGCCGCGGAGGGTGGCCACTGTGA
AATTTTGGCGGCGTTTCTGGAGCACGGGGCAGTGGTGGACTCGCGGGACA
AGACGGACGTGACGCCGCTGTACCTGGCAGCGGCTGAGGGGCACTTGAAC
GCCGTGAGATTGCTGGTGGCCGCCGGTGCCAAGTTAGATTTGTCGGAAAA
GGTCAACGGACACAGTCCATTGATGGTCGCCATAATGAGGGAGCACCACG
AGGTCGTGGAGGCGTTACTCGATGCCGGGGCCTCGCCCGGGACCAGCGGG
GAGAAGGGGGATACCGCCTTGCACCTGGCGTGCAAAGTAGACACCCCCGA
GGGGACCGTGGCCTCTCTGCTCGGGCACGGAGCGCTGCCCGGGCACTGCT
GGAACGAGAAGCTACAGACGCCGCTGCACTGGGCTGCGTCCTGGGGAAAA
GTAGAGGCCGCGAGGCAGCTGATCCAGTGGCTGTCGCCGAGGCAGATAAA
CATGCGCGACAAGGTGGTGAACAGCATGGATGGTGGAGAAACTCCGCTCC
TTATCGCCGTACGGCGCGGTCACGTCGATATGGTGAAGCTGGTGAGAGGC
AGGAGAGGTCCATCGGAGGGACGCACCCCGCTCCACGTCGCCGCGGAGGG
TGGCCACTGTGAAATTTTGGCGGCGTTTCTGGAGCACGGGGCAGTGGTGG
ACTCGCGGGACAAGACGGACGTGACGCCGCTGTACCTGGCAGCGGCTGAG
GGGCACTTGAACGCCGTGAGATTGCTGGTGGCCGCCGGTGCCAAGTTAGA
TTTGTCGGAAAAGGTCAACGGACACAGTCCATTGATGGTCGCCATAATGA
GGGAGCACCACGAGGTCGTGGAGGCGTTACTCGATGCCGGGGCCTCGCCC
GGGACCAGCGGGGAGAAGGGGGATACCGCCTTGCACCTGGCGTGCAAAGT
AGACACCCCCGAGGGGACCGTGGCCTCTCTGCTCGGGCACGGAGCGCTGC
CCGGGCACTGCTGGAACGAGAAGCTACAGACGCCGCTGCACTGGGCTGCG
TCCTGGGGAAAAGTAGAGGCCGCGAGGCAGCTGATCCAGTGGCTGTCGCC
GAGGCAGATAAACATGCGCGACAAGGTGGTGAACAGCATGGATGGTGGAG
AAACTCCGCTCCTTATCGCCGTACGGCGCGGTCACGTCGATATGGTGAAG
CTGGTGAGAGGCAGGAGAGGTCCA
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