mRNA_H-paniculata_contig14888.2911.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A6H5KNR8_9PHAE (Smr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNR8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.060e-39 Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 61 VYVYETSFRARVEPVHWDPTRGDVIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQVR 396 VY+YE+ F AR + +WDP D +DLHGYS AVAKAAIRSGLS++L+R+L A+ DP+VV+ FT ITG G+HS++ FEPVLRP AQDMLL+EF+PPL THF N GRLQVR Sbjct: 976 VYIYESIF-ARQQAENWDPADKDAVDLHGYSQAVAKAAIRSGLSRVLQRYLVAEKDPSVVEQFTIITGRGRHSRQAFEPVLRPVAQDMLLEEFEPPLPTHFDPTNDGRLQVR 1086
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A835YST6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST6_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.750e-27 Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 19 VVPTAEPTNQNTQAVYVYETSFRARVEPVHW--DPTRGDVIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQVR 396 +V E + + VYV++ + + DP+ G +DLHGYS AVAKAA+RSGL L R++ + D +VV DFT ITG+G+HSK F+P +RP Q MLL+E DPPL F GNAGRL V+ Sbjct: 971 IVELLEECGEFDKTVYVFDQAVAVGPGAANGSLDPSTGKTVDLHGYSLAVAKAAVRSGLQHLRRKYQSTGQDVSVVNDFTIITGIGRHSKLAFKPTVRPTVQAMLLEEQDPPLRAQFTPGNAGRLVVQ 1098
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: W7U458_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U458_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.660e-23 Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 58 AVYVYETSFRARVEPVHWDPTR---GDVIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQVR 396 AV+V+E+S + ++ G ++DLHGYS VA+AA+R+GL +L + + V+KDF FITGVG++S+ PFEPVLRPA Q ML ++FDPPL + N GRL VR Sbjct: 1029 AVHVFESSVVGYIRSEDYEMESDGPGMLVDLHGYSQPVARAAVRAGLKRLCQMYEQTGKREGVIKDFVFITGVGRNSEMPFEPVLRPAMQRMLNEDFDPPLPCETAENNPGRLIVR 1144
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: D7FIK6_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK6_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-19 Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 217 AQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQVR 396 A+ DP+VV+ FT ITG G+HS++ FEPVLRP AQDMLL+EF+PPL THF N GRLQVR Sbjct: 8 AEKDPSVVEQFTIITGRGRHSRQAFEPVLRPVAQDMLLEEFEPPLPTHFDPTNDGRLQVR 67
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: I2CPG0_NANGC (Putative udp-glucosyltransferase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG0_NANGC) HSP 1 Score: 79.0 bits (193), Expect = 5.760e-15 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 133 IDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 +DLHG SA VA AA+R L ++ + PA VKD I+GVGK S PF P LRPA QDML++++ PP+ + GNAGR+ V Sbjct: 186 LDLHGMSAPVAAAAVRYALKRIREEWWRC--GPAAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVV 270
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A4D9CXQ2_9STRA (Smr domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXQ2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.740e-14 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 133 IDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 +DLHG SA VA AA+R L ++ + PA VKD I+GVGK S PF P LRPA QDML++++ PP+ + GNAGR+ V Sbjct: 1050 LDLHGMSAPVAAAAVRYALKRIREEWWRC--GPAAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVV 1134
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A7S3XTI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTI1_HETAK) HSP 1 Score: 70.5 bits (171), Expect = 1.470e-11 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 31 AEPTNQNTQAVYVYETSFRARVEPVHWDPTRGDVIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 AE ++ + ++ A +E + + VIDLHGY VA AIR +S++L AQ+ VK ITG GKHS +PVLRP Q+ML++EF PP+ T GN+GR+ + Sbjct: 393 AETVFKDASDLELFGNEILASIENSYSQDSPAVVIDLHGYVLPVAHMAIRRAMSEVLG---VAQHCQQSVKPIEIITGSGKHSINN-KPVLRPEIQNMLVEEFFPPIYTSTKPGNSGRIII 509
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A7S2RYR1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYR1_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.770e-10 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 130 VIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 +IDLHG+SA +A+ AIR+ L LL + T P + ITG G++S+ +PVLR Q ML++EF PP+++ GN GRL++ Sbjct: 899 LIDLHGFSAPLAQTAIRATLFDLLGQ--TTITHPTLFPRVVIITGKGRNSRH--QPVLREVVQQMLVEEFYPPISSTTVPGNEGRLEI 982
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A1Z5K940_FISSO (Smr domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K940_FISSO) HSP 1 Score: 66.2 bits (160), Expect = 4.810e-10 Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 130 VIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 V+DLHG + +A +A+R + L T ND V D +TG G++S P+LRPA Q ML++EF PP+ T GN G L++ Sbjct: 1054 VLDLHGMNLPMAHSAVRIAFQQGLLTD-TGPNDDESVNDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRI 1140
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Match: A0A1Z5JGL3_FISSO (Smr domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGL3_FISSO) HSP 1 Score: 65.9 bits (159), Expect = 6.560e-10 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 130 VIDLHGYSAAVAKAAIRSGLSKLLRRFLTAQNDPAVVKDFTFITGVGKHSKRPFEPVLRPAAQDMLLDEFDPPLATHFFDGNAGRLQV 393 V+DLHG + +A +A+R + L + ND +V D +TG G++S P+LRPA Q ML++EF PP+ T GN G L++ Sbjct: 1050 VLDLHGMNLPMAHSAVRIAFQQGLLTDIWPNNDKSV-NDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRI 1136 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14888.2911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14888.2911.1 >prot_H-paniculata_contig14888.2911.1 ID=prot_H-paniculata_contig14888.2911.1|Name=mRNA_H-paniculata_contig14888.2911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp LLCIYTVVPTAEPTNQNTQAVYVYETSFRARVEPVHWDPTRGDVIDLHGYback to top mRNA from alignment at H-paniculata_contig14888:5315..6388- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14888.2911.1 ID=mRNA_H-paniculata_contig14888.2911.1|Name=mRNA_H-paniculata_contig14888.2911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig14888:5315..6388- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14888:5315..6388- >mRNA_H-paniculata_contig14888.2911.1 ID=mRNA_H-paniculata_contig14888.2911.1|Name=mRNA_H-paniculata_contig14888.2911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig14888:5315..6388- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |