Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 2254 |
| Cds size | 2235 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14837.2880.1 >prot_H-paniculata_contig14837.2880.1 ID=prot_H-paniculata_contig14837.2880.1|Name=mRNA_H-paniculata_contig14837.2880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=745bp
MSLLLSIANAAAEAVPGLTRYPLRSGGGGGGTQSVSGSSRSRGWRERRQS
FGLSSVSGSAGTGRSNALSSTPPLGGGEVYRLSWYRRPLRSLSPRMPLSL
SAVSGGDPLTFSRRPRTCFPPVSGSVGGSVGGSVSVGGDDSDDRSAAWLT
PTLTPTKEERVGDGVALEAAAAAAAVAATTMGYLRISRPSTPPTFRDRSP
DPQHGVNRRMVAGPMSLTVEAASTPDPPTPPRSRRLAKGGGGGGGAGVPS
PSLHAAKVVVRRVNGEVLPGPPTVDAPTAPTLERIHRHTDDDDDDDDDHG
DVGGADGDDYSDGVSNAHVGISVSPDGDSPQGGEDDGVEVSPWDTVRELK
AEVERLKREMANMAAAAAVAAVNTPGATGPVQPGAVNYVSGGGCVDAPKS
PRAQPTGLIPWQWTPAENGLSATGGGSARARAPSTSSAAAAAAAVANATR
PKSVRLRADDSWMQRRFSRESDGANNAEGVLRVRRKSMLPQSPASSSQDG
EGYATVGTPSVGRKSSSSSGSSSSSNLINNDDESGGTPSQLAALSPPARA
RRGSLGVGPSPASGEKTIGGLKGDGDTTVATITTAATTTAAAAPAAAAPS
STILLDADEERDAAGRARAADAAGSASHQSENDSGHRDITVRPFPVFFPP
GGVADNESEEAAAAVAEAEAAAEAGPVGGEEESTEAGGEATEATDTATLT
AELKKAAAAVVASTGAGAAAAAAAAAAGADGSSSGEGCGIGGGEG back to topmRNA from alignment at H-paniculata_contig14837:785..3038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14837.2880.1 ID=mRNA_H-paniculata_contig14837.2880.1|Name=mRNA_H-paniculata_contig14837.2880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2254bp|location=Sequence derived from alignment at H-paniculata_contig14837:785..3038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTCAGGAGTCACCAGCGATGTCGCTGTTGCTCTCCATCGCAAATGCTG
CTGCCGAAGCCGTGCCAGGACTCACGCGCTACCCTCTCCGCAGCGGGGGT
GGGGGAGGAGGTACCCAGAGCGTGTCGGGGTCATCTCGAAGTCGAGGCTG
GCGAGAGCGGCGACAGTCATTCGGTTTGTCGTCGGTGTCCGGGTCCGCCG
GGACCGGTAGAAGCAACGCTCTCTCGTCAACCCCTCCTTTGGGCGGTGGA
GAGGTTTATCGTCTGTCGTGGTACCGGAGGCCGTTGCGGTCGTTGTCGCC
GCGTATGCCTCTCTCTCTTTCAGCTGTCAGCGGCGGCGACCCGTTGACCT
TCTCGCGGCGCCCTCGCACATGCTTCCCGCCCGTCAGCGGCAGCGTCGGT
GGCAGTGTCGGCGGCAGCGTCAGCGTCGGCGGGGATGATTCGGACGATCG
CAGCGCCGCTTGGTTAACACCGACGCTTACTCCCACGAAGGAAGAGAGGG
TAGGGGACGGGGTGGCGCTCGAGGCGGCGGCGGCAGCGGCAGCGGTGGCG
GCGACGACGATGGGATATCTCCGTATTTCTAGACCCTCCACGCCGCCTAC
TTTCCGCGACAGATCTCCGGATCCTCAGCATGGCGTGAACAGACGGATGG
TCGCCGGTCCGATGTCCCTAACCGTGGAGGCGGCGTCGACGCCGGATCCG
CCGACGCCACCGCGTTCGAGAAGGCTCGCCAAGGGAGGAGGAGGGGGAGG
GGGAGCAGGCGTACCGTCGCCCTCGCTGCATGCGGCGAAAGTAGTGGTAA
GGAGGGTAAACGGGGAGGTTTTGCCCGGGCCACCAACCGTAGATGCGCCG
ACGGCGCCCACGCTGGAAAGAATTCATCGGCACACGGACGACGACGATGA
CGACGATGATGATCATGGTGATGTCGGTGGTGCTGACGGTGACGACTACA
GCGATGGCGTGAGCAATGCCCACGTCGGCATCTCCGTTTCTCCCGATGGA
GATTCGCCTCAGGGTGGCGAGGACGACGGCGTCGAAGTCAGCCCATGGGA
CACGGTCCGGGAGCTGAAGGCGGAGGTGGAGCGTTTGAAACGCGAGATGG
CAAACATGGCCGCCGCCGCTGCCGTCGCCGCCGTCAACACGCCGGGTGCT
ACGGGTCCGGTACAACCCGGAGCAGTCAACTACGTCAGTGGCGGCGGCTG
CGTCGATGCTCCGAAGTCGCCCCGCGCGCAACCGACGGGTTTGATTCCCT
GGCAATGGACCCCTGCCGAGAATGGCTTGAGTGCCACTGGCGGCGGCTCG
GCGAGAGCCCGCGCGCCCAGCACCTCCTCCGCAGCCGCCGCCGCAGCCGC
TGTCGCTAACGCAACGCGACCGAAGTCGGTCCGCCTACGCGCAGATGACT
CTTGGATGCAGCGGCGGTTCAGCAGGGAGTCGGACGGTGCGAACAACGCT
GAAGGCGTCTTGAGGGTTAGACGAAAGAGCATGTTACCGCAGAGCCCGGC
CAGCAGCTCCCAAGACGGCGAGGGCTACGCCACCGTCGGCACGCCATCGG
TCGGCCGTAAAAGTAGCAGCAGTAGCGGAAGCAGTAGCAGCAGCAACCTC
ATCAACAATGACGACGAAAGCGGCGGGACTCCATCACAGTTGGCAGCACT
GTCGCCGCCGGCTCGCGCCCGCCGGGGTAGCTTGGGCGTCGGCCCTTCTC
CGGCGTCGGGAGAAAAGACGATTGGCGGATTAAAAGGCGATGGTGACACC
ACCGTCGCGACCATCACCACCGCGGCCACCACCACCGCCGCCGCCGCCCC
CGCCGCCGCCGCCCCTAGCTCCACGATCCTTCTAGACGCTGACGAGGAGC
GAGACGCCGCTGGGAGAGCGCGAGCGGCCGACGCAGCCGGCAGTGCTTCC
CACCAAAGCGAAAACGACAGCGGCCACCGCGACATCACCGTCCGTCCGTT
CCCGGTTTTCTTTCCCCCCGGAGGGGTAGCAGACAACGAGTCTGAGGAGG
CGGCTGCGGCGGTTGCGGAAGCAGAAGCAGCGGCGGAAGCAGGACCAGTA
GGAGGAGAAGAAGAGAGCACAGAGGCAGGAGGCGAGGCCACGGAGGCGAC
GGACACGGCCACGTTAACGGCCGAGTTGAAGAAGGCGGCCGCGGCTGTAG
TGGCAAGCACGGGAGCCGGGGCGGCGGCTGCGGCAGCGGCGGCGGCGGCC
GGAGCAGATGGCTCGTCCTCGGGGGAAGGGTGTGGAATCGGCGGAGGAGA
AGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig14837:785..3038+ >mRNA_H-paniculata_contig14837.2880.1 ID=mRNA_H-paniculata_contig14837.2880.1|Name=mRNA_H-paniculata_contig14837.2880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4470bp|location=Sequence derived from alignment at H-paniculata_contig14837:785..3038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGCTGTTGCTCTCCATCGCAAATGCTGCTGCCGAAGCCGTGCCAGG
ACTCACGCGCTACCCTCTCCGCAGCGGGGGTGGGGGAGGAGGTACCCAGA
GCGTGTCGGGGTCATCTCGAAGTCGAGGCTGGCGAGAGCGGCGACAGTCA
TTCGGTTTGTCGTCGGTGTCCGGGTCCGCCGGGACCGGTAGAAGCAACGC
TCTCTCGTCAACCCCTCCTTTGGGCGGTGGAGAGGTTTATCGTCTGTCGT
GGTACCGGAGGCCGTTGCGGTCGTTGTCGCCGCGTATGCCTCTCTCTCTT
TCAGCTGTCAGCGGCGGCGACCCGTTGACCTTCTCGCGGCGCCCTCGCAC
ATGCTTCCCGCCCGTCAGCGGCAGCGTCGGTGGCAGTGTCGGCGGCAGCG
TCAGCGTCGGCGGGGATGATTCGGACGATCGCAGCGCCGCTTGGTTAACA
CCGACGCTTACTCCCACGAAGGAAGAGAGGGTAGGGGACGGGGTGGCGCT
CGAGGCGGCGGCGGCAGCGGCAGCGGTGGCGGCGACGACGATGGGATATC
TCCGTATTTCTAGACCCTCCACGCCGCCTACTTTCCGCGACAGATCTCCG
GATCCTCAGCATGGCGTGAACAGACGGATGGTCGCCGGTCCGATGTCCCT
AACCGTGGAGGCGGCGTCGACGCCGGATCCGCCGACGCCACCGCGTTCGA
GAAGGCTCGCCAAGGGAGGAGGAGGGGGAGGGGGAGCAGGCGTACCGTCG
CCCTCGCTGCATGCGGCGAAAGTAGTGGTAAGGAGGGTAAACGGGGAGGT
TTTGCCCGGGCCACCAACCGTAGATGCGCCGACGGCGCCCACGCTGGAAA
GAATTCATCGGCACACGGACGACGACGATGACGACGATGATGATCATGGT
GATGTCGGTGGTGCTGACGGTGACGACTACAGCGATGGCGTGAGCAATGC
CCACGTCGGCATCTCCGTTTCTCCCGATGGAGATTCGCCTCAGGGTGGCG
AGGACGACGGCGTCGAAGTCAGCCCATGGGACACGGTCCGGGAGCTGAAG
GCGGAGGTGGAGCGTTTGAAACGCGAGATGGCAAACATGGCCGCCGCCGC
TGCCGTCGCCGCCGTCAACACGCCGGGTGCTACGGGTCCGGTACAACCCG
GAGCAGTCAACTACGTCAGTGGCGGCGGCTGCGTCGATGCTCCGAAGTCG
CCCCGCGCGCAACCGACGGGTTTGATTCCCTGGCAATGGACCCCTGCCGA
GAATGGCTTGAGTGCCACTGGCGGCGGCTCGGCGAGAGCCCGCGCGCCCA
GCACCTCCTCCGCAGCCGCCGCCGCAGCCGCTGTCGCTAACGCAACGCGA
CCGAAGTCGGTCCGCCTACGCGCAGATGACTCTTGGATGCAGCGGCGGTT
CAGCAGGGAGTCGGACGGTGCGAACAACGCTGAAGGCGTCTTGAGGGTTA
GACGAAAGAGCATGTTACCGCAGAGCCCGGCCAGCAGCTCCCAAGACGGC
GAGGGCTACGCCACCGTCGGCACGCCATCGGTCGGCCGTAAAAGTAGCAG
CAGTAGCGGAAGCAGTAGCAGCAGCAACCTCATCAACAATGACGACGAAA
GCGGCGGGACTCCATCACAGTTGGCAGCACTGTCGCCGCCGGCTCGCGCC
CGCCGGGGTAGCTTGGGCGTCGGCCCTTCTCCGGCGTCGGGAGAAAAGAC
GATTGGCGGATTAAAAGGCGATGGTGACACCACCGTCGCGACCATCACCA
CCGCGGCCACCACCACCGCCGCCGCCGCCCCCGCCGCCGCCGCCCCTAGC
TCCACGATCCTTCTAGACGCTGACGAGGAGCGAGACGCCGCTGGGAGAGC
GCGAGCGGCCGACGCAGCCGGCAGTGCTTCCCACCAAAGCGAAAACGACA
GCGGCCACCGCGACATCACCGTCCGTCCGTTCCCGGTTTTCTTTCCCCCC
GGAGGGGTAGCAGACAACGAGTCTGAGGAGGCGGCTGCGGCGGTTGCGGA
AGCAGAAGCAGCGGCGGAAGCAGGACCAGTAGGAGGAGAAGAAGAGAGCA
CAGAGGCAGGAGGCGAGGCCACGGAGGCGACGGACACGGCCACGTTAACG
GCCGAGTTGAAGAAGGCGGCCGCGGCTGTAGTGGCAAGCACGGGAGCCGG
GGCGGCGGCTGCGGCAGCGGCGGCGGCGGCCGGAGCAGATGGCTCGTCCT
CGGGGGAAGGGTGTGGAATCGGCGGAGGAGAAGGGATGTCGCTGTTGCTC
TCCATCGCAAATGCTGCTGCCGAAGCCGTGCCAGGACTCACGCGCTACCC
TCTCCGCAGCGGGGGTGGGGGAGGAGGTACCCAGAGCGTGTCGGGGTCAT
CTCGAAGTCGAGGCTGGCGAGAGCGGCGACAGTCATTCGGTTTGTCGTCG
GTGTCCGGGTCCGCCGGGACCGGTAGAAGCAACGCTCTCTCGTCAACCCC
TCCTTTGGGCGGTGGAGAGGTTTATCGTCTGTCGTGGTACCGGAGGCCGT
TGCGGTCGTTGTCGCCGCGTATGCCTCTCTCTCTTTCAGCTGTCAGCGGC
GGCGACCCGTTGACCTTCTCGCGGCGCCCTCGCACATGCTTCCCGCCCGT
CAGCGGCAGCGTCGGTGGCAGTGTCGGCGGCAGCGTCAGCGTCGGCGGGG
ATGATTCGGACGATCGCAGCGCCGCTTGGTTAACACCGACGCTTACTCCC
ACGAAGGAAGAGAGGGTAGGGGACGGGGTGGCGCTCGAGGCGGCGGCGGC
AGCGGCAGCGGTGGCGGCGACGACGATGGGATATCTCCGTATTTCTAGAC
CCTCCACGCCGCCTACTTTCCGCGACAGATCTCCGGATCCTCAGCATGGC
GTGAACAGACGGATGGTCGCCGGTCCGATGTCCCTAACCGTGGAGGCGGC
GTCGACGCCGGATCCGCCGACGCCACCGCGTTCGAGAAGGCTCGCCAAGG
GAGGAGGAGGGGGAGGGGGAGCAGGCGTACCGTCGCCCTCGCTGCATGCG
GCGAAAGTAGTGGTAAGGAGGGTAAACGGGGAGGTTTTGCCCGGGCCACC
AACCGTAGATGCGCCGACGGCGCCCACGCTGGAAAGAATTCATCGGCACA
CGGACGACGACGATGACGACGATGATGATCATGGTGATGTCGGTGGTGCT
GACGGTGACGACTACAGCGATGGCGTGAGCAATGCCCACGTCGGCATCTC
CGTTTCTCCCGATGGAGATTCGCCTCAGGGTGGCGAGGACGACGGCGTCG
AAGTCAGCCCATGGGACACGGTCCGGGAGCTGAAGGCGGAGGTGGAGCGT
TTGAAACGCGAGATGGCAAACATGGCCGCCGCCGCTGCCGTCGCCGCCGT
CAACACGCCGGGTGCTACGGGTCCGGTACAACCCGGAGCAGTCAACTACG
TCAGTGGCGGCGGCTGCGTCGATGCTCCGAAGTCGCCCCGCGCGCAACCG
ACGGGTTTGATTCCCTGGCAATGGACCCCTGCCGAGAATGGCTTGAGTGC
CACTGGCGGCGGCTCGGCGAGAGCCCGCGCGCCCAGCACCTCCTCCGCAG
CCGCCGCCGCAGCCGCTGTCGCTAACGCAACGCGACCGAAGTCGGTCCGC
CTACGCGCAGATGACTCTTGGATGCAGCGGCGGTTCAGCAGGGAGTCGGA
CGGTGCGAACAACGCTGAAGGCGTCTTGAGGGTTAGACGAAAGAGCATGT
TACCGCAGAGCCCGGCCAGCAGCTCCCAAGACGGCGAGGGCTACGCCACC
GTCGGCACGCCATCGGTCGGCCGTAAAAGTAGCAGCAGTAGCGGAAGCAG
TAGCAGCAGCAACCTCATCAACAATGACGACGAAAGCGGCGGGACTCCAT
CACAGTTGGCAGCACTGTCGCCGCCGGCTCGCGCCCGCCGGGGTAGCTTG
GGCGTCGGCCCTTCTCCGGCGTCGGGAGAAAAGACGATTGGCGGATTAAA
AGGCGATGGTGACACCACCGTCGCGACCATCACCACCGCGGCCACCACCA
CCGCCGCCGCCGCCCCCGCCGCCGCCGCCCCTAGCTCCACGATCCTTCTA
GACGCTGACGAGGAGCGAGACGCCGCTGGGAGAGCGCGAGCGGCCGACGC
AGCCGGCAGTGCTTCCCACCAAAGCGAAAACGACAGCGGCCACCGCGACA
TCACCGTCCGTCCGTTCCCGGTTTTCTTTCCCCCCGGAGGGGTAGCAGAC
AACGAGTCTGAGGAGGCGGCTGCGGCGGTTGCGGAAGCAGAAGCAGCGGC
GGAAGCAGGACCAGTAGGAGGAGAAGAAGAGAGCACAGAGGCAGGAGGCG
AGGCCACGGAGGCGACGGACACGGCCACGTTAACGGCCGAGTTGAAGAAG
GCGGCCGCGGCTGTAGTGGCAAGCACGGGAGCCGGGGCGGCGGCTGCGGC
AGCGGCGGCGGCGGCCGGAGCAGATGGCTCGTCCTCGGGGGAAGGGTGTG
GAATCGGCGGAGGAGAAGGG back to top
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