mRNA_H-paniculata_contig14785.2856.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 282 bits (722), Expect = 8.830e-84 Identity = 124/203 (61.08%), Postives = 155/203 (76.35%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGP 826 P +A N+YGQ+NS YPV ET+AEG ++E+K+V+STYHWGH+E+F+CNA NLPGGPD T+ QSCFN++P DRA DD P DP++ GR+ +D PCRA+ETDQ++ GA +V TAR++LP+ L+CE+ +QMVYYTGNSC HQGY EFNP SWPS CAP+K DWI G CG D YPEEFWNCADI+ITS P P Sbjct: 107 PEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPAP 309
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 292 bits (747), Expect = 6.120e-83 Identity = 133/217 (61.29%), Postives = 161/217 (74.19%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGPFPRPNPAPQPTIPE 868 P +A N+YG +NS YPVLET+AEG ++E K+V+STYHWGH+E+F+C+AD+LPGGPD T+ QSCFN++P DR DD SPIDP++ GR+ +D PCRA+ETDQ M GA G+V TAR++LP+ LTCE+ +QMVYYTGNSC HQGY EFNP SWPS CAP K DWI G CG D YPEEFWNCADI+ITS P P P P PT PE Sbjct: 106 PEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDPAPSPTTVLTPAPTAPE 322
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 281 bits (720), Expect = 9.050e-83 Identity = 125/198 (63.13%), Postives = 155/198 (78.28%), Query Frame = 2 Query: 230 SARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGI-CGGDDHYPEEFWNCADIAITSGRSP 820 +A G NRYGQ+NS YPVLET+AEG ++E+K+V++TYHWGH+E+F+C+AD+LP GPD + QSCFN+YP DRA DD SPIDP + GR+ +D PCRA+ETDQ + GA G+V TAR+QLP+ +TCE+ +QMVYYTGNSC HQGY EFNP SWPS CAP+K DWI G CG D YPEEFWNCAD++ITS P Sbjct: 59 AAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSDGGP 256
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 285 bits (729), Expect = 9.640e-83 Identity = 124/201 (61.69%), Postives = 154/201 (76.62%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSP 820 P +A G N+YGQ+NS YPVLET+AEG ++E+K+V+STYHWGH+E+F+C+AD+LP GPD + QSCFN+YP DRA DD PIDP + GR+ +D PCRA+ETDQ + GA G+V TAR+QLP+ +TCE+ +QM YYTGNSC HQGY EFNP SWPS CAP+K DWI G CG D YPEEFWNCAD++ITS P Sbjct: 104 PEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 272 bits (695), Expect = 3.120e-78 Identity = 178/403 (44.17%), Postives = 219/403 (54.34%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGPFP------------------RPNPAPQPTIPEXXXXXXXXXXEADSEPVSTXXXXXXXXXXXXXKRPGYPKKNY--------------------------PSSSXXXXXXXXXXXXXXXYASEDSTYQSEPMAAG----EPAELFDEPV------------DSCSGNWGQCGGSKFEGPNCCSAGAECVEKSEWFFHCVP 1246 P +A G N+YGQ+NS YPVLET+AEG ++E+K+V+STYHWGH+E+F+C+AD+LP GPD + QSCFN++P DRA DD PIDP + GR+ +D PCRA+ETDQ + GA G+V TAR+QLP+ +TCE+ +QM Y+ NSC HQGY EFNP SWP CAP+K DWI G CG D YPEEFWNCAD++ITS P P P XXXXXXXXXX ++ XXXXXXXXXXXXX P S S D + AAG E A+ + + D CS WGQCGG +EGP CC GAECVE++E F CVP Sbjct: 75 PEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXXXXXXESEAPVDELIEPTPXXXXXXXXXXXXXXXXXXXXXXXXMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAELEPATPMDSPTEPIVATFAPSVPPPVSTDPDCEDPVGAAGYECEEMADCYSDVQRRQLVESCRPRGDRCSEGWGQCGGLHWEGPECCWPGAECVERNEHFHQCVP 475
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 273 bits (699), Expect = 4.150e-78 Identity = 121/205 (59.02%), Postives = 150/205 (73.17%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGPFP 832 P +A G+N+YG++N YPVL T+AEG V+E+K+++STYHWGH+E F+C+ +LP G D + QSCFN YP DRA DD PIDP + GR+ +D PCRA+ETDQ + GA G+V TARYQLPE + C++ +QMVYYTGNSC H+GY EFNP SWPS CAP+K DWI G CG D YPEEFWNCADI+ITS PG P Sbjct: 111 PEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPGTAP 315
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 279 bits (714), Expect = 9.710e-77 Identity = 124/201 (61.69%), Postives = 154/201 (76.62%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSP 820 P +A G N YG +NS YPVLET+AEG ++E K+V+STYHWGH+E+F+C+A++LPGGPD T+ QSCFN++P DR DD SPIDP++ GR+ +D PCRA+ETDQ + GA G+V TAR++LPE ++CE+ +QMVYYTGNSC HQGY EFNP SWPS CAP K DWI G CG D YPEEFWNCADI+ITS P Sbjct: 106 PEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 254 bits (649), Expect = 8.150e-73 Identity = 124/248 (50.00%), Postives = 154/248 (62.10%), Query Frame = 2 Query: 125 PPRLLHERRAVAKWKLLRDRQDLCSLWSV-RRPGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGPFPRPNPAPQPTIP 865 P R +E+ +A+ ++ ++ + P + G N Y N +P+L T+ EG V+EIK+ M+ YHWGH+E F+CNAD + PDG Q CFN YP RA D + SPIDPN+PGRY+VD CR ETDQ+ P GA+ G V+ A YQLPE LTC++ LQM YYTGNSC H GYEEF P SWPS CAP K DWI L+ +CG + YPEEFW CAD AIT P NP P PT P Sbjct: 51 PLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAIT------PDGMANPTPAPTEP 291
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 254 bits (650), Expect = 2.440e-71 Identity = 163/421 (38.72%), Postives = 202/421 (47.98%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHW-----------------------------------------------------------------------GHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGRSPGPFPRPNPAPQPTIPEXXXXXXXXXXEADSEPVSTXXXXXXXXXXXXXKRPGYPKKNYPSSSXXXXXXXXXXXXXXXYASEDSTYQSEPMAAG--EPAELFDEPVDSCSGNWGQCGGS-KFEGPNCCSAGAECVEKSEWFFHCVPAANN 1258 P A G N YGQ+NS YPV ++EG ++EIK+V+STYHW GHLE F+CNA+++ PDG + Q CFN +P DRA DDGDASPIDP+H GRY++D PCRA ETDQ GA G+V TARY+LP LTC + LQMVYYTGN+C H GY+EF+P+S P CAP KEDW+ + G+CG D YPEEFWNCADI ITS G P PT P D E +S P P P + XXXXXXXXXXX S + P A +PAE+++ QCGG ++G CC +ECVE ++ + C PA Sbjct: 101 PEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGG-------GPAPTTPSP----------TDEEELSPTP------------EPSVPTVELPRTPXXXXXXXXXXXSGMESTPVPSVAPASPTATSCDDPAEVYE-----------QCGGDDSYDGRTCCVENSECVELADCYSECRPAETT 480
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 246 bits (628), Expect = 1.300e-68 Identity = 146/384 (38.02%), Postives = 183/384 (47.66%), Query Frame = 2 Query: 218 PGTDSARGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADNLPGGPDGTLIQSCFNKYPFDRAADDGDASPIDPNHPGRYFVDLPCRAAETDQSMPAGAEIGEVVTARYQLPEDLTCEQ*TLQMVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITS-GRSPGPFPRPNPAPQPTIPEXXXXXXXXXXEADSEPVSTXXXXXXXXXXXXXKRPGYPKKNYPSSSXXXXXXXXXXXXXXXYASEDSTYQSEPMA--------------AGE----------------PAELFDEPV--------DSCSGNWGQCGGSKFEGPNCCSAGAECVEKSEWFFHCVPAA 1252 P ++ G N Y N + L++F G V+E+ +VM+ YHWGH E FVCN D++ PDG Q CFN +P RA DDGDASPIDPN+PGRY+VD CR ET+QS + + G + RY LP D+ CE LQMVYYTGN+C H GYEEFNP SWPS CAPNK DWI L+ +CG YPEEFW C+D ++TS G +P P P+P + + + + Y S A ED Y+ A GE PA F EP D C+ WGQCGG +EG CC G ECV ++W+ C P A Sbjct: 112 PEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLP-DIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGSTPADAPMPDPVDEEDDEDSTDGGMEMYEYVGCYTDRQDDRILGDKLDSDLMTADFCYE-YCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSDGCAEAWGQCGGGNWEGSTCCMEGYECVANNDWYSQCRPTA 490 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14785.2856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14785.2856.1 >prot_H-paniculata_contig14785.2856.1 ID=prot_H-paniculata_contig14785.2856.1|Name=mRNA_H-paniculata_contig14785.2856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp MVYYTGNSCHHQGYEEFNPLSWPSECAPNKEDWITLEPGICGGDDHYPEEback to top mRNA from alignment at H-paniculata_contig14785:1262..6281- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14785.2856.1 ID=mRNA_H-paniculata_contig14785.2856.1|Name=mRNA_H-paniculata_contig14785.2856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5020bp|location=Sequence derived from alignment at H-paniculata_contig14785:1262..6281- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14785:1262..6281- >mRNA_H-paniculata_contig14785.2856.1 ID=mRNA_H-paniculata_contig14785.2856.1|Name=mRNA_H-paniculata_contig14785.2856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at H-paniculata_contig14785:1262..6281- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |