prot_H-paniculata_contig14780.2852.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14780.2852.1
Unique Nameprot_H-paniculata_contig14780.2852.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length347
Homology
BLAST of mRNA_H-paniculata_contig14780.2852.1 vs. uniprot
Match: A0A6H5JGI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI5_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.510e-62
Identity = 115/164 (70.12%), Postives = 136/164 (82.93%), Query Frame = 0
Query:  181 KSVLGKAGDAIKAAFNAVMAAGTLASLVLAAETIWELHGTPLTFANALPTLTKLLPLTGIGVLGAAQLVGVVARVTRVIVTLPIMVSGTWVILQSVPQLLPKGSDLSGAGSLAAILATPEVLETAAVLAFLSGMVLWAVNFTRGAVTALSAAAFPTNGDDNDDD 344
            KSVL KAG+A+KAAFNA MAA TLASL LAAE +W+LHG PLT +NA+PTLTKLLPLTGIGV GAAQLVG+VARV RVIVTLP+MVSGTWVILQ+ P+L PKG DL+GAGSLAA+LATPEVLE AAV+A L G  +WA+NF  GAV AL      ++ ++ ++D
Sbjct:  185 KSVLEKAGNALKAAFNAFMAASTLASLALAAEAVWQLHGAPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGLVARVVRVIVTLPVMVSGTWVILQNAPKLFPKGLDLTGAGSLAALLATPEVLEAAAVIALLGGTAIWALNFATGAVGALMPGQSKSSREEEEED 348          
BLAST of mRNA_H-paniculata_contig14780.2852.1 vs. uniprot
Match: D7FYX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX7_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 2.820e-37
Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 0
Query:  181 KSVLGKAGDAIKAAFNAVMAAGTLASLVLAAETIWELHGTPLTFANALPTLTKLLPLTGIGVLGAAQLVGVVARVTRVIVTLPIMVSGTWVILQSVPQ 278
            K VL KAG+A+KAAFNA MAA TLASLVLAAE +W+LHG PLT +NA+PTLTKLLPLTGIGV GAAQLVG+VARV RVIVTLP+MVSGTWVILQ+ P+
Sbjct:  186 KPVLEKAGNALKAAFNAFMAASTLASLVLAAEAVWQLHGAPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGLVARVVRVIVTLPVMVSGTWVILQNAPK 283          
BLAST of mRNA_H-paniculata_contig14780.2852.1 vs. uniprot
Match: A0A836CM52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM52_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.230e-24
Identity = 68/159 (42.77%), Postives = 103/159 (64.78%), Query Frame = 0
Query:  188 GDAIKAAFNAVMAAGTLASLVLAAETIWELHGTPLTFANALPTLTKLLPLTGIGVLGAAQLVGVVARVTRVIVTLPIMVSGTWVILQSVPQLLPKGSDLSGAGSLAAILATPEVLETAAVLAFLSGMVLWAVNFTRGAVTALSAAAFPTNGDDNDDDYD 346
            G+ +++A+N ++ A T+AS+VLA + + +L   P+T    L TL  LLPL   GV GAA+LV V+ R+ RV+VT+P+++ G ++   S+P LL    DL+  G L A+LATPEVLE  A++A + G  +W V    G VT + A+    +GDD+DD+YD
Sbjct:   27 GEVVRSAWNGLLVALTVASVVLAVDAVVKLKTQPIT----LDTLGNLLPLAAFGVAGAARLVAVLLRLVRVLVTVPVVLGGAYLAAPSIPDLLKHSPDLA-TGGLFAVLATPEVLEAIALIAVIVGAGIWIVRQLAGMVTGM-ASVRGNDGDDSDDEYD 179          
BLAST of mRNA_H-paniculata_contig14780.2852.1 vs. uniprot
Match: A0A7S2V4B2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4B2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.720e-10
Identity = 38/129 (29.46%), Postives = 70/129 (54.26%), Query Frame = 0
Query:  189 DAIKAAFNAVMAAGTLASLVLAAETIWELHGTPLTFANALPTLTKLLPLTGIGVLGAAQLVGVVARVTRVIVTLPIMVSGTWVILQSVPQLLPKGSDLSGAGSLAAILATPEVLETAAVLAFLSGMVLW 317
            D+ K AF  ++    + S+  A   +++L+  P T +N   T+T +LP    G  G  +L+G   R+ R+++++PI+V GTW +   +P+ +    DL+   SL  I A PE++E   ++ F+   + W
Sbjct:  128 DSAKKAFGFLLVGVAIYSVYTAGTAVYKLYTEPFTLSNLGSTVTNVLPALTFGYFGTLKLIGAFMRLVRILLSVPIVVGGTWFLAPRLPEFIQSSPDLAST-SLLGIFAVPEIVEAIILILFVGSFLFW 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14780.2852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGI5_9PHAE2.510e-6270.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYX7_ECTSI2.820e-3779.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM52_9STRA1.230e-2442.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4B2_9STRA4.720e-1029.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 281..291
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 320..346
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..259
NoneNo IPR availableTMHMMTMhelixcoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 193..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14780contigH-paniculata_contig14780:286..2334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14780.2852.1mRNA_H-paniculata_contig14780.2852.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14780 213..3666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14780.2852.1 ID=prot_H-paniculata_contig14780.2852.1|Name=mRNA_H-paniculata_contig14780.2852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
MITRRRVGGAIYCQPRGGTVLLHRALVLVGCVLVCQARQLLAFGTPQHLP
LRPPFINAAIRFPRLWRMSPASPCTWGLPAAQQHRLQRRLPHLRRRRGST
IVSPLAMWAPREETRPKQLYQGEQDDDGGGSHQEEGGQMAERTNTYSFND
SVDGIDNHKEGDRKTSASKRKNYRKKAEKEKSVLGKAGDAIKAAFNAVMA
AGTLASLVLAAETIWELHGTPLTFANALPTLTKLLPLTGIGVLGAAQLVG
VVARVTRVIVTLPIMVSGTWVILQSVPQLLPKGSDLSGAGSLAAILATPE
VLETAAVLAFLSGMVLWAVNFTRGAVTALSAAAFPTNGDDNDDDYD*
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