mRNA_H-paniculata_contig14772.2849.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 312 bits (799), Expect = 6.810e-102 Identity = 147/225 (65.33%), Postives = 184/225 (81.78%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 DLWTC+ SGRK+LG HV++V S F LRHAL++VKHYAPS+E+Q E+AS+ILFTIFRAT+ EYGI ++DLAGGTTDSG DVKAMCVN L H + WDWC CHLA K+AEN FGTSAD Q+SKN AR + LV KTA K+NQS KQKF+++ ++ML+E LKITKHAPQRWL ++ +ERIIRLWHV R+++A G++F LD+G+N+ +L+LYSLLQPLSAI Sbjct: 226 DLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAI 450
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 287 bits (734), Expect = 6.350e-89 Identity = 138/225 (61.33%), Postives = 170/225 (75.56%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 DLW C+ +G K++ HV +V S +L+H LLAVKHYAPS+ VQ +AS+ILF +F + + E+G+ ++DLAGGTTDSG DVKAMCVN L H WDWC CHLA +AAE AFGTSAD QK KN DAR + LV K A KVNQSP FKQKFDE Q+ M E LKI KHAPQRWL ++R +ERIIRLWHV R+++A G +F LD+GDNK +L+LYSLL+PL+AI Sbjct: 245 DLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAI 469
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 250 bits (638), Expect = 2.260e-74 Identity = 120/225 (53.33%), Postives = 160/225 (71.11%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 D+WT + SGRKFLG HV++V + F+L+ ALL++K YAP ++RASD+LF I ++ + E+G+ + LA GTTDSG DVKA+ N L + V W WC CHL KAAE A+G D KSKNP AR I V K + +N+SP FK KF+++Q+DML E K+ KHAPQRWL + RT+ER IRLWHV R+++++ G F L+EGD K A+L+LYSLLQPLS+I Sbjct: 262 DIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSI 486
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 234 bits (596), Expect = 5.980e-72 Identity = 111/225 (49.33%), Postives = 157/225 (69.78%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 D+WT +PSGRKFLG H+++VT+ F+L+ AL++ K A+++L I + + E+G+ +DLA GTTDSG DVK++ VN LH + V W+WC CHL KAAE+AFGT D QKSKNP+ R++ V +++SP KF+++Q+D+L E LKI APQRWL ++RTLER+IRLWHV R++ ++ G F L+EGDNK +L+LYSLLQPLS++ Sbjct: 188 DIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSV 399
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.190e-71 Identity = 110/225 (48.89%), Postives = 158/225 (70.22%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 D+W +PSGRKFLG HV++VT+ F+L+ LL++K Y PS + +A+++L I A + E+G +DLA GTTDSG DVK++ VN LH + V W+WC CHL KAAE+AFGT D QKSKNP+A + + +++S KF+++Q+D+L E LKI APQRWL ++RT+ER+IRLWHV R+++++ G F+L+EGDNK + +LYSLLQ LS++ Sbjct: 18 DIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSV 242
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 233 bits (595), Expect = 8.390e-70 Identity = 109/163 (66.87%), Postives = 134/163 (82.21%), Query Frame = 1 Query: 97 VKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFA 585 VKHYAPS+ VQ +E+AS +LFT+FR+ + E+GI ++DLAGGTTDSG D+KAMC N L H+V WDWC CHLA +AAE AFGTSAD QKSKN DAR++ SL+ K A KVNQSP FKQKFDE QM+ML E LKI++HAPQRWL ++R +ERIIRLWHV R++F+ Sbjct: 82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRKLFS 244
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.030e-64 Identity = 108/228 (47.37%), Postives = 152/228 (66.67%), Query Frame = 1 Query: 1 DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSL---VTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 D+W +PSGRKFLG HV++VT+ F+L+ LL S+ +A+++L I A + E+G+ +DLA GTTDSG DVK++ VN LH + V W+WC CHL KAAE+AFGT D Q SKNP+AR + + T K N + KF+++Q+D+L E L I APQRWL ++RT+ER+IRLW V R+++++ G F L+EGDNK + +LYSLLQPLS++ Sbjct: 18 DIWADKPSGRKFLGVHVFYVTANFELKQTLL--------SDALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLTA----KFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSV 233
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.820e-61 Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 97 VKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 +K Y+PS + AS++L IF++ + E+G+ +DLA GTTDSG DVK+ VN L+ + V W+WC CHL KAAE+ FGT D QKSKNP+AR + V +N+S FK KF+++Q+D+L + LKI APQRWL +RTLER+IRLWHV R+++++ G F L+EGDNK+A+L+L+SLLQ LS++ Sbjct: 10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSV 202
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 191 bits (485), Expect = 2.380e-56 Identity = 89/175 (50.86%), Postives = 123/175 (70.29%), Query Frame = 1 Query: 151 ILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 +L I +A + E+G+ +DLA GT DSG DVK++ N LH V W+WC CHL KAAE+ FGT D QKSKNP+AR + + +++S FK KFD++Q+D+L E LKI AP+RWL ++RTLER+IRLWHV R+++++ G F L+EGDNK +L+LYSLLQP S++ Sbjct: 79 VLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSV 253
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 174 bits (440), Expect = 2.560e-49 Identity = 89/197 (45.18%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 85 ALLAVKHYAPSSEVQDNERASDILFTIFRATMGEYGIMVADLAGGTTDSGPDVKAMCVNTLHDDHDVCWDWCTCHLACKAAENAFGTSADVQKSKNPDARRIFSLVTKTAQKVNQSPYFKQKFDEIQMDMLEEALKITKHAPQRWLGMIRTLERIIRLWHVFRRIFAEIGDKFLLDEGDNKSAVLELYSLLQPLSAI 675 A +K Y PS + +AS++L I A + E+G+ +DLA GTTDSG DVK++ VN LH V W+ C HL KAAE+ FGT D QKSKNP AR + + +++S FK KF ++Q+D+ E APQRWL ++ TLER+IRLWHV R+++++ G F L+EGD +L+L SLLQPLS++ Sbjct: 14 AFAQIKRYQPSQDAVGEAKASEVLLEIVNAILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSV 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14772.2849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14772.2849.1 >prot_H-paniculata_contig14772.2849.1 ID=prot_H-paniculata_contig14772.2849.1|Name=mRNA_H-paniculata_contig14772.2849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp DLWTCEPSGRKFLGWHVYWVTSEFKLRHALLAVKHYAPSSEVQDNERASDback to top mRNA from alignment at H-paniculata_contig14772:5495..6519+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14772.2849.1 ID=mRNA_H-paniculata_contig14772.2849.1|Name=mRNA_H-paniculata_contig14772.2849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1025bp|location=Sequence derived from alignment at H-paniculata_contig14772:5495..6519+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14772:5495..6519+ >mRNA_H-paniculata_contig14772.2849.1 ID=mRNA_H-paniculata_contig14772.2849.1|Name=mRNA_H-paniculata_contig14772.2849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig14772:5495..6519+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |