prot_H-paniculata_contig14771.2848.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14771.2848.1
Unique Nameprot_H-paniculata_contig14771.2848.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length285
Homology
BLAST of mRNA_H-paniculata_contig14771.2848.1 vs. uniprot
Match: D7G6A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A8_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.650e-119
Identity = 188/281 (66.90%), Postives = 220/281 (78.29%), Query Frame = 0
Query:    1 MSDRVLLVQWTPDFEAP-PREVEDGENTT-GTNAANADRTSSLEEIFMDPGFFWSWERFEDRWTNYFGFSEEDLVINHVDVMENYNSLVCSNLKEGFMKDEKFIKVVNTEYFAPLLSVNKYSSRSVLEEIPSGDLFASLSNWLMRPVPTVSAAVQKFKERYFEDNYVIGIEMDVFTDTSDAGVMPDMQKELFFKEASDAIYRAKSNLTPDQQGIVALVVTDDEALLKPI-----KESFGAAGVVATLLPRGFGTTRILTEMQQAWLLGYGDVCIVSAVSNI 274
            MS+RVLLVQWT   E+    ++  G +TT G ++  +  TSSLEEIF+DPGFFWSWERFEDRW NYFG++EEDL    VDV+ NYNSLVC NLK  FM D +FIK+ NTEYFAPLL+VN+++SR+VLEEIPS D FASLSNWLMRPVPTV+AAV++F+ERY EDNYVI +EMDV  D++    M   Q++LFFKEASDA YRAK NLTPDQQGIV LVVTDDE  L+       ++S GAAGVVA   PRGFGTTRILTE+QQAWLLGYGDV IVS  S I
Sbjct:   32 MSERVLLVQWTGSDESQGSNDIAAGNSTTAGESSGTSGSTSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHASRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYLEDNYVIVMEMDVLADSTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGIVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPI 311          
BLAST of mRNA_H-paniculata_contig14771.2848.1 vs. uniprot
Match: A0A6H5JJN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN7_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 7.360e-115
Identity = 184/281 (65.48%), Postives = 211/281 (75.09%), Query Frame = 0
Query:    1 MSDRVLLVQWT--PDFEAPPREVEDGENTTGTNAANADRTSSLEEIFMDPGFFWSWERFEDRWTNYFGFSEEDLVINHVDVMENYNSLVCSNLKEGFMKDEKFIKVVNTEYFAPLLSVNKYSSRSVLEEIPSGDLFASLSNWLMRPVPTVSAAVQKFKERYFEDNYVIGIEMDVFTDTSDAGVMPDMQKELFFKEASDAIYRAKSNLTPDQQGIVALVVTDDEALLKPI-----KESFGAAGVVATLLPRGFGTTRILTEMQQAWLLGYGDVCIVSAVSNI 274
            MS+RVLLVQWT   D +                   +  TSSLEEIF+DPGFFWSWERFEDRW NYFG++EEDL    VDV+ NYNSLVC NLK  FM D +FIK+ NTEYFAPLL+VN+++ R+VLEEIPS D FASLSNWLMRPVPTV+AAV++F+ERYFEDNYVI +EMDV  DT+    M   Q++LFFKEASDA YRAK NLTPDQQG+V LVVTDDE  L+       ++S GAAGVVA   PRGFGTTRILTE+QQAWLLGYGDV IVS  S I
Sbjct:  151 MSERVLLVQWTGSDDSQGXXXXXXXXXXXXXXXXGTSGSTSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHAGRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYFEDNYVIVMEMDVLADTTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGVVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPI 430          
BLAST of mRNA_H-paniculata_contig14771.2848.1 vs. uniprot
Match: A0A835YLY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 2.920e-76
Identity = 136/283 (48.06%), Postives = 183/283 (64.66%), Query Frame = 0
Query:    1 MSDRVLLVQWTPDFEAP-PREVEDGENTT--GTNAA---NADRTSSLEEIFMDPGFFWSWERFEDRWTNYFGFSEEDLVINHVDVMENYNSLVCSNLKEGFMKDEKFIKVVNTEYFAPLLSVNKYSSRSVLEEIPSGDLFASLSNWLMRPVPTVSAAVQKFKERYFEDNYVIGIEMDVFTDTSDAGVMPDMQKELFFKEASDAIYRAKSNLTPDQQGIVALVVTDDEALLKPI-----KESFGAAGVVATLLPRGFGTTRILTEMQQAWLLGYGDVCIVSAVS 272
            +S R LLVQWT D+EAP P ++  G      G NA    + +R SSLEEIF+DPGF+WSW+RF  RWT  F  +  ++ I  V+V     +L C +L+   ++D+ F+KV    YFAP L+VN   + ++  ++P   LFA LSNWL+RPVPTV  AV +F ERYFEDNYVIG+EM ++    + G M   Q++ FF+EA+DA YRA   L    +G++ LVVTDDE  L+       +++ GAAG++A   PRG GT RILTE+Q+ WLLGY DVCIVS  S
Sbjct:   37 LSGRALLVQWTKDYEAPGPSDIGGGAGDWDYGANATAVPHDERRSSLEEIFLDPGFWWSWDRFMGRWTGRFERAAAEIDIVVVNVSAEVEALACGDLRRWRVRDQ-FVKVAGAHYFAPALAVNARHADALFAQLPRDQLFAYLSNWLLRPVPTVMTAVHRFAERYFEDNYVIGLEMSLWQALGEWGTMTAAQQKRFFQEAADATYRATQAL----RGVMILVVTDDEEALRARLKGQPQDALGAAGIIAITGPRGTGTRRILTELQEVWLLGYADVCIVSPAS 314          
BLAST of mRNA_H-paniculata_contig14771.2848.1 vs. uniprot
Match: A0A7S2UWL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 9.960e-9
Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   43 EIFMDPGFFWSWERFEDRWTNYFGFSEEDLV-INHVDVMENYNSLVCSNLKEGFMKDEKFIKVVNT-------EYFAPLLSVNKYSSRSVLEEIPSGDLFASLSNWLMRPVPTVSAAVQKFKER 158
            E+F  PGF W W   ++         E DL  I  +D +  + S +CS+L+  +    K +++          +YFA L++ N   +  + EE+P   LFA LSN+L+RP+P V+ AV +F+ER
Sbjct:    1 ELFEPPGFAWEWAALQEALGE-----EGDLSKIPTLDPVAQFQSTICSDLRT-WDSGSKVVRLSTNSADGGPHQYFAALIAANPVFT-FLQEELPYDQLFALLSNFLLRPLPVVTYAVSRFRER 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14771.2848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6A8_ECTSI1.650e-11966.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJN7_9PHAE7.360e-11565.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLY2_9STRA2.920e-7648.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UWL4_9STRA9.960e-933.06Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14771contigH-paniculata_contig14771:177..4527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14771.2848.1mRNA_H-paniculata_contig14771.2848.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14771 153..4818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14771.2848.1 ID=prot_H-paniculata_contig14771.2848.1|Name=mRNA_H-paniculata_contig14771.2848.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MSDRVLLVQWTPDFEAPPREVEDGENTTGTNAANADRTSSLEEIFMDPGF
FWSWERFEDRWTNYFGFSEEDLVINHVDVMENYNSLVCSNLKEGFMKDEK
FIKVVNTEYFAPLLSVNKYSSRSVLEEIPSGDLFASLSNWLMRPVPTVSA
AVQKFKERYFEDNYVIGIEMDVFTDTSDAGVMPDMQKELFFKEASDAIYR
AKSNLTPDQQGIVALVVTDDEALLKPIKESFGAAGVVATLLPRGFGTTRI
LTEMQQAWLLGYGDVCIVSAVSNITFAYYRSCFP*
back to top