mRNA_H-paniculata_contig14770.2847.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: D7FIB4_ECTSI (Hemolysin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB4_ECTSI) HSP 1 Score: 288 bits (738), Expect = 5.190e-91 Identity = 165/224 (73.66%), Postives = 189/224 (84.38%), Query Frame = 1 Query: 1 LAAPVLLPVPSRRRGCVTGVALLSVMAFVALQRPAVAATIGSVVGRRGGSLLAMMPSPAIAGKEGVVRGAEMSLETVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 +AA + P+R R V GV L+S AF L+RPA AA IG +RG +L+ M+PS A GV + EM+LE+VAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEG +SPFQVLNKDITRVLTTIL+ATTVCTIYNAALFTN+AIQMFGSAGLAYATAALT+TTLFFGEL+PKALGVNNAEVVARR+LPIIIVLS LNPVAK+FT++S +++ Sbjct: 65 VAAALRAATPARCRRAVGGV-LVSAAAFCVLRRPATAAAIGGAAAQRGRALVGMIPSSVGAAAGGVKQ--EMTLESVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGMDSPFQVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLML 285
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A6H5JI81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI81_9PHAE) HSP 1 Score: 286 bits (731), Expect = 3.640e-88 Identity = 164/224 (73.21%), Postives = 188/224 (83.93%), Query Frame = 1 Query: 1 LAAPVLLPVPSRRRGCVTGVALLSVMAFVALQRPAVAATIGSVVGRRGGSLLAMMPSPAIAGKEGVVRGAEMSLETVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 +AA + P+R R GV L+S AF L+RPA AA IG +RG +L+ M+PS A GV + EM+LE+VAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEG +SPFQVLNKDITRVLTTIL+ATTVCTIYNAALFTN+AIQMFGSAGLAYATAALT+TTLFFGEL+PKALGVNNAEVVARR+LPIIIVLS LNPVAK+FT++S +++ Sbjct: 230 VAAALRAATPARCRRAAGGV-LVSAAAFCVLRRPATAAAIGGAAVQRGRALVGMIPSSVGAAAGGVKQ--EMTLESVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGMDSPFQVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLML 450
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A836CE63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE63_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.910e-60 Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1 Query: 190 EGVVRGAEMSLETVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 +G + M + + +L LW LF SAA HSAEIAITTLYPWKVKEFAEEEGE SPF+VLN+DITRVLTTILVATT+C+IY+AALFTN+AIQ+FG+ GLAYATAALT TLFFGEL+PKALGVNNAE+VARR++PII +++ L+P+ K F+ +SK+++ Sbjct: 32 DGALDAIPMEPKELMSRLTLWCVLFSISAALHSAEIAITTLYPWKVKEFAEEEGEKSPFRVLNQDITRVLTTILVATTICSIYSAALFTNLAIQLFGAKGLAYATAALTTVTLFFGELMPKALGVNNAEMVARRMVPIINLMAVFLSPIGKGFSWVSKLVL 192
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: W7TVL3_9STRA (Hemolysin-related protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVL3_9STRA) HSP 1 Score: 177 bits (449), Expect = 8.730e-48 Identity = 89/142 (62.68%), Postives = 122/142 (85.92%), Query Frame = 1 Query: 247 LWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 ++ TLFV SAAFH+AE +ITTLYPWKVKEFA+EEG+NSPF++L +DITRVLTTILVATT CTIY+AALFTN+A+++ G+ G+AY+T LT+ TL FGEL+PK+LGV+NAE+VAR ++P I +L+ L+PV K ++ +K+++ Sbjct: 313 IFATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVL 454
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A7R9U4U4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4U4_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.690e-47 Identity = 99/181 (54.70%), Postives = 125/181 (69.06%), Query Frame = 1 Query: 145 GSLLAMMPSPAIA-----GKEGVVRGAEMSLETVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 G L+ P A+A G + G + +ALW LFV SAA HSAE AITTLYPWKV+EFAEEEGE SPF VL+KDITRVL+TILV TT CTIY+AALFT++A G+ G A AT ALT+ T+FFGELLPKALGV +AE+VARR++P I +L+ + P+ K ++ + I+ Sbjct: 127 GGLMLQYPEAALATVPVGGTADIAAGGQGWRAVPLSSVALWLVLFVGSAALHSAETAITTLYPWKVREFAEEEGEKSPFAVLSKDITRVLSTILVMTTACTIYSAALFTSMATTALGAKGTAIATGALTVITVFFGELLPKALGVGSAEIVARRMVPPISLLAVVIAPLGKLLSVSASAIL 307
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A7S1TRQ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRQ1_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.780e-44 Identity = 87/132 (65.91%), Postives = 105/132 (79.55%), Query Frame = 1 Query: 247 LWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAK 642 +W LFV SA HSAE AITTLYPWKV+EFAEEEGE SPF VL+KDITRVLTT+L+ TT CTIY+AALFT +A + G AG + ATA LT+ T+FFGELLPKALGV +AEVVARR++P I ++ + P+ K Sbjct: 159 VWLLLFVGSACLHSAETAITTLYPWKVREFAEEEGEKSPFAVLSKDITRVLTTVLLMTTACTIYSAALFTRMATEALGPAGTSLATAILTVITVFFGELLPKALGVGSAEVVARRMVPPISAVAVVIAPLGK 290
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A7S1IHX9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHX9_9EUGL) HSP 1 Score: 157 bits (396), Expect = 6.480e-41 Identity = 94/180 (52.22%), Postives = 122/180 (67.78%), Query Frame = 1 Query: 145 GSLLAMMPSPAIA---GKEGVVRGAEMSLETVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSA-GLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 G+ L++ PA A G V GA V P++ LW LF + AFHSAE AITTL+PWKVKEFAE+EG +SPF L++DITRVLTTILVA+T+CT+Y A+ T V Q+ + +A AT LT +LFF EL+PKALGV+NAE+VAR ++PII LS+ LNP+ F SK ++ Sbjct: 131 GAALSVSAGPAAAMGVGTVSVEAGAAAG-GPVLPRVGLWLCLFSIATAFHSAESAITTLWPWKVKEFAEDEGVDSPFHYLSQDITRVLTTILVASTICTVYGTAIITTVIAQVCSTPKAIAAATIGLTAFSLFFQELMPKALGVSNAELVARAMVPIIAALSYVLNPIGMVFGWASKAVL 309
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A7S1IYD8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IYD8_9EUGL) HSP 1 Score: 157 bits (398), Expect = 6.510e-41 Identity = 85/150 (56.67%), Postives = 111/150 (74.00%), Query Frame = 1 Query: 226 TVAPKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQM-FGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 +V P++ALW LF +AAFH AE+AITTL+PWKVKEFA +EG +SPF L +DITRVLTTI+VA+T+CT+Y A+ + V + S G+A ATA LT TLFF EL+PKALGV+NAE+VAR ++P I LS+ LNP+ F SK ++ Sbjct: 239 SVLPRVALWAALFTMAAAFHGAEVAITTLWPWKVKEFAADEGSDSPFHYLAQDITRVLTTIIVASTICTVYGTAIISTVIADVCVTSKGIAIATAGLTAFTLFFQELVPKALGVSNAELVARAMVPTIAALSYVLNPIGMVFGRSSKALL 388
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A7S2BAT8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BAT8_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.340e-37 Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 235 PKLALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 P + W LF SA H+AEIAITTLYPWKV+EFAEEEG SPF+ L DITRVLTTILV TT CT+ + LFT +A S +A AT LT+ T+FFGEL+PKALGV+NAEVVAR ++P + V+ +P A +F+ L+K ++ Sbjct: 118 PLVLSWIVLFSASAGLHAAEIAITTLYPWKVREFAEEEGPKSPFKFLQDDITRVLTTILVLTTCCTVTSTVLFTQIASCF--SLNVAKATTILTLITIFFGELIPKALGVSNAEVVARFLVPPLTVVCTVFSPFALAFSWLAKSVL 261
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Match: A0A482S6T4_9ARCH (DUF21 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6T4_9ARCH) HSP 1 Score: 141 bits (356), Expect = 1.950e-37 Identity = 76/144 (52.78%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 241 LALWFTLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGENSPFQVLNKDITRVLTTILVATTVCTIYNAALFTNVAIQMFGSAGLAYATAALTITTLFFGELLPKALGVNNAEVVARRILPIIIVLSWALNPVAKSFTILSKVII 672 L W LF SA HSAE AIT + PWKV++FAEEEG SPF LNK+ITR+L TIL+ TT C+IY+ ALF +F L + TAALT+ TLF GELLPKAL V+N+E+VAR+I+P++ ++ L P S T+LS +++ Sbjct: 139 LLTWALLFSISAVMHSAESAITKISPWKVQQFAEEEGPTSPFATLNKNITRMLITILLTTTACSIYSTALFVTSMSALFPRLSLGFITAALTVITLFCGELLPKALAVSNSELVARKIVPVLARMTSVLTPFTTSVTVLSSLVL 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14770.2847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14770.2847.1 >prot_H-paniculata_contig14770.2847.1 ID=prot_H-paniculata_contig14770.2847.1|Name=mRNA_H-paniculata_contig14770.2847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp LAAPVLLPVPSRRRGCVTGVALLSVMAFVALQRPAVAATIGSVVGRRGGSback to top mRNA from alignment at H-paniculata_contig14770:3568..6055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14770.2847.1 ID=mRNA_H-paniculata_contig14770.2847.1|Name=mRNA_H-paniculata_contig14770.2847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2488bp|location=Sequence derived from alignment at H-paniculata_contig14770:3568..6055+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14770:3568..6055+ >mRNA_H-paniculata_contig14770.2847.1 ID=mRNA_H-paniculata_contig14770.2847.1|Name=mRNA_H-paniculata_contig14770.2847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig14770:3568..6055+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |